A Guide to Utilization of the Microbiology Laboratory for Diagnosis of Infectious Diseases: 2018 Update by the Infectious Diseases Society of America and the American Society for Microbiologya Article Swipe
YOU?
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· 2018
· Open Access
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· DOI: https://doi.org/10.1093/cid/ciy381
The critical nature of the microbiology laboratory in infectious disease diagnosis calls for a close, positive working relationship between the physician/advanced practice provider and the microbiologists who provide enormous value to the healthcare team. This document, developed by experts in laboratory and adult and pediatric clinical medicine, provides information on which tests are valuable and in which contexts, and on tests that add little or no value for diagnostic decisions. This document presents a system-based approach rather than specimen-based approach, and includes bloodstream and cardiovascular system infections, central nervous system infections, ocular infections, soft tissue infections of the head and neck, upper and lower respiratory infections, infections of the gastrointestinal tract, intra-abdominal infections, bone and joint infections, urinary tract infections, genital infections, and other skin and soft tissue infections; or into etiologic agent groups, including arthropod-borne infections, viral syndromes, and blood and tissue parasite infections. Each section contains introductory concepts, a summary of key points, and detailed tables that list suspected agents; the most reliable tests to order; the samples (and volumes) to collect in order of preference; specimen transport devices, procedures, times, and temperatures; and detailed notes on specific issues regarding the test methods, such as when tests are likely to require a specialized laboratory or have prolonged turnaround times. In addition, the pediatric needs of specimen management are also emphasized. There is intentional redundancy among the tables and sections, as many agents and assay choices overlap. The document is intended to serve as a guidance for physicians in choosing tests that will aid them to quickly and accurately diagnose infectious diseases in their patients.
Related Topics
- Type
- article
- Language
- en
- Landing Page
- https://doi.org/10.1093/cid/ciy381
- https://academic.oup.com/cid/article-pdf/67/6/e1/34130303/ciy381.pdf
- OA Status
- bronze
- Cited By
- 564
- References
- 299
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W4211113261
Raw OpenAlex JSON
- OpenAlex ID
-
https://openalex.org/W4211113261Canonical identifier for this work in OpenAlex
- DOI
-
https://doi.org/10.1093/cid/ciy381Digital Object Identifier
- Title
-
A Guide to Utilization of the Microbiology Laboratory for Diagnosis of Infectious Diseases: 2018 Update by the Infectious Diseases Society of America and the American Society for MicrobiologyaWork title
- Type
-
articleOpenAlex work type
- Language
-
enPrimary language
- Publication year
-
2018Year of publication
- Publication date
-
2018-04-30Full publication date if available
- Authors
-
Miller Jm, Matthew J. Binnicker, Sheldon Campbell, Karen C. Carroll, Kimberle C. Chapin, Peter H. Gilligan, Mark D. Gonzalez, Robert C. Jerris, Sue C. Kehl, Robin Patel, Bobbi S. Pritt, Sandra S. Richter, Barbara Robinson-Dunn, Joseph D. Schwartzman, James W. Snyder, Sam R. Telford, Elitza S. Theel, Richard B. Thomson, Melvin P. Weinstein, Joseph D. YaoList of authors in order
- Landing page
-
https://doi.org/10.1093/cid/ciy381Publisher landing page
- PDF URL
-
https://academic.oup.com/cid/article-pdf/67/6/e1/34130303/ciy381.pdfDirect link to full text PDF
- Open access
-
YesWhether a free full text is available
- OA status
-
bronzeOpen access status per OpenAlex
- OA URL
-
https://academic.oup.com/cid/article-pdf/67/6/e1/34130303/ciy381.pdfDirect OA link when available
- Concepts
-
Infectious disease (medical specialty), Medicine, Clinical microbiology, Medical laboratory, Intensive care medicine, Diagnostic test, Respiratory tract infections, Pediatric Infectious Disease, Disease, Pathology, Pediatrics, Internal medicine, Biology, Respiratory system, MicrobiologyTop concepts (fields/topics) attached by OpenAlex
- Cited by
-
564Total citation count in OpenAlex
- Citations by year (recent)
-
2025: 94, 2024: 99, 2023: 105, 2022: 88, 2021: 74Per-year citation counts (last 5 years)
- References (count)
-
299Number of works referenced by this work
- Related works (count)
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10Other works algorithmically related by OpenAlex
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| abstract_inverted_index.presents | 73 |
| abstract_inverted_index.provider | 23 |
| abstract_inverted_index.provides | 48 |
| abstract_inverted_index.reliable | 165 |
| abstract_inverted_index.specific | 190 |
| abstract_inverted_index.specimen | 179, 218 |
| abstract_inverted_index.valuable | 54 |
| abstract_inverted_index.volumes) | 172 |
| abstract_inverted_index.addition, | 213 |
| abstract_inverted_index.approach, | 80 |
| abstract_inverted_index.concepts, | 150 |
| abstract_inverted_index.contexts, | 58 |
| abstract_inverted_index.developed | 37 |
| abstract_inverted_index.diagnosis | 11 |
| abstract_inverted_index.document, | 36 |
| abstract_inverted_index.etiologic | 132 |
| abstract_inverted_index.including | 135 |
| abstract_inverted_index.medicine, | 47 |
| abstract_inverted_index.patients. | 266 |
| abstract_inverted_index.pediatric | 45, 215 |
| abstract_inverted_index.prolonged | 209 |
| abstract_inverted_index.regarding | 192 |
| abstract_inverted_index.sections, | 231 |
| abstract_inverted_index.suspected | 161 |
| abstract_inverted_index.transport | 180 |
| abstract_inverted_index.accurately | 260 |
| abstract_inverted_index.decisions. | 70 |
| abstract_inverted_index.diagnostic | 69 |
| abstract_inverted_index.healthcare | 33 |
| abstract_inverted_index.infections | 96, 107 |
| abstract_inverted_index.infectious | 9, 262 |
| abstract_inverted_index.laboratory | 7, 41, 206 |
| abstract_inverted_index.management | 219 |
| abstract_inverted_index.physicians | 249 |
| abstract_inverted_index.redundancy | 226 |
| abstract_inverted_index.syndromes, | 139 |
| abstract_inverted_index.turnaround | 210 |
| abstract_inverted_index.bloodstream | 83 |
| abstract_inverted_index.emphasized. | 222 |
| abstract_inverted_index.infections, | 87, 91, 93, 106, 113, 117, 120, 122, 137 |
| abstract_inverted_index.infections. | 145 |
| abstract_inverted_index.infections; | 129 |
| abstract_inverted_index.information | 49 |
| abstract_inverted_index.intentional | 225 |
| abstract_inverted_index.preference; | 178 |
| abstract_inverted_index.procedures, | 182 |
| abstract_inverted_index.respiratory | 105 |
| abstract_inverted_index.specialized | 205 |
| abstract_inverted_index.introductory | 149 |
| abstract_inverted_index.microbiology | 6 |
| abstract_inverted_index.relationship | 18 |
| abstract_inverted_index.system-based | 75 |
| abstract_inverted_index.temperatures; | 185 |
| abstract_inverted_index.cardiovascular | 85 |
| abstract_inverted_index.specimen-based | 79 |
| abstract_inverted_index.arthropod-borne | 136 |
| abstract_inverted_index.intra-abdominal | 112 |
| abstract_inverted_index.microbiologists | 26 |
| abstract_inverted_index.gastrointestinal | 110 |
| abstract_inverted_index.physician/advanced | 21 |
| cited_by_percentile_year.max | 100 |
| cited_by_percentile_year.min | 99 |
| corresponding_author_ids | https://openalex.org/A5051149885 |
| countries_distinct_count | 1 |
| institutions_distinct_count | 20 |
| sustainable_development_goals[0].id | https://metadata.un.org/sdg/17 |
| sustainable_development_goals[0].score | 0.5 |
| sustainable_development_goals[0].display_name | Partnerships for the goals |
| citation_normalized_percentile.value | 0.99906243 |
| citation_normalized_percentile.is_in_top_1_percent | True |
| citation_normalized_percentile.is_in_top_10_percent | True |