Absolute quantification of the microbiota spatial distribution in the murine large intestine Article Swipe
Wenyu Jin
,
Jiaxin Guo
,
Meng Zhang
,
Lin-Zuo Teng
,
Yanjie Chao
,
Philippe Joseph Sansonetti
,
Yi‐Zhou Gao
·
YOU?
·
· 2023
· Open Access
·
· DOI: https://doi.org/10.59717/j.xinn-life.2023.100030
YOU?
·
· 2023
· Open Access
·
· DOI: https://doi.org/10.59717/j.xinn-life.2023.100030
The species diversity, abundance, and location of intestinal bacteria bear major consequences on host intestinal functions, affecting the balance between health and disease. Recent studies addressed the relative abundance of bacteria in feces and on the gut mucosal surface. However, few of these publications reported the absolute number of bacteria in different compartments of the gut, especially those associated with the intestinal epithelial surface, compared to the luminal content reflected by feces. In this study, the number of bacteria present in the lumen or associated with the mucosal surface of mice gut samples was calculated using the bacterial “internal standard method” during sequencing. Three spiking bacteria were used for mutual corroboration. The microbiota spatial distribution in the cecum, proximal and distal colon were studied in the lumen content and gut wall fixed niches. This study also provides an example to demonstrate that absolute and relative quantification may yield different conclusions. This study’s method may eliminate such misjudgments and provide insight into the distribution and quantity of gut microbiome.
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Metadata
- Type
- article
- Language
- en
- Landing Page
- https://doi.org/10.59717/j.xinn-life.2023.100030
- https://www.the-innovation.org/data/article/export-pdf?id=6503ff0b6b06fb071c4c8152
- OA Status
- diamond
- Cited By
- 11
- References
- 38
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W4386785627
All OpenAlex metadata
Raw OpenAlex JSON
- OpenAlex ID
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https://openalex.org/W4386785627Canonical identifier for this work in OpenAlex
- DOI
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https://doi.org/10.59717/j.xinn-life.2023.100030Digital Object Identifier
- Title
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Absolute quantification of the microbiota spatial distribution in the murine large intestineWork title
- Type
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articleOpenAlex work type
- Language
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enPrimary language
- Publication year
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2023Year of publication
- Publication date
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2023-01-01Full publication date if available
- Authors
-
Wenyu Jin, Jiaxin Guo, Meng Zhang, Lin-Zuo Teng, Yanjie Chao, Philippe Joseph Sansonetti, Yi‐Zhou GaoList of authors in order
- Landing page
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https://doi.org/10.59717/j.xinn-life.2023.100030Publisher landing page
- PDF URL
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https://www.the-innovation.org/data/article/export-pdf?id=6503ff0b6b06fb071c4c8152Direct link to full text PDF
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YesWhether a free full text is available
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diamondOpen access status per OpenAlex
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https://www.the-innovation.org/data/article/export-pdf?id=6503ff0b6b06fb071c4c8152Direct OA link when available
- Concepts
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Bacteria, Cecum, Gut flora, Feces, Biology, Microbiome, Microbiology, Large intestine, Lumen (anatomy), Immunology, Cell biology, Ecology, Genetics, BiochemistryTop concepts (fields/topics) attached by OpenAlex
- Cited by
-
11Total citation count in OpenAlex
- Citations by year (recent)
-
2025: 5, 2024: 6Per-year citation counts (last 5 years)
- References (count)
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38Number of works referenced by this work
- Related works (count)
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10Other works algorithmically related by OpenAlex
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