Additional file 2 of No detectable alloreactive transcriptional responses under standard sample preparation conditions during donor-multiplexed single-cell RNA sequencing of peripheral blood mononuclear cells Article Swipe

View

Christopher S. McGinnis , David Siegel , Guorui Xie , George C. Hartoularos , Mars Stone , Chun Ye , Zev J. Gartner , Nadia R. Roan , Sulggi A. Lee ·

YOU? · · 2021 · Open Access · · DOI: https://doi.org/10.6084/m9.figshare.13620170

Additional file 2: Supplemental Table 1. List of enriched gene sets amongst PBMC cell types as determined by GSEA for 8-donor PBMC scRNA-seq dataset. Supplemental Table 2. List of enriched gene sets amongst PBMC cell types as determined by GSEA for Zheng et al. PBMC scRNA-seq dataset.

Related Topics

Rna

Biology

Molecular Biology

Computational Biology

Concepts

Peripheral blood mononuclear cell RNA Peripheral blood Biology Molecular biology Computational biology Immunology Cell biology Chemistry Gene Genetics In vitro

Metadata

Type: dataset
Language: en
Landing Page: https://doi.org/10.6084/m9.figshare.13620170
OA Status: gold
Related Works: 10
OpenAlex ID: https://openalex.org/W4394292919

All OpenAlex metadata

Raw OpenAlex JSON

OpenAlex ID: https://openalex.org/W4394292919

Canonical identifier for this work in OpenAlex
DOI: https://doi.org/10.6084/m9.figshare.13620170

Digital Object Identifier
Title: Additional file 2 of No detectable alloreactive transcriptional responses under standard sample preparation conditions during donor-multiplexed single-cell RNA sequencing of peripheral blood mononuclear cells

Work title
Type: dataset

OpenAlex work type
Language: en

Primary language
Publication year: 2021

Year of publication
Publication date: 2021-01-01

Full publication date if available
Authors: Christopher S. McGinnis, David Siegel, Guorui Xie, George C. Hartoularos, Mars Stone, Chun Ye, Zev J. Gartner, Nadia R. Roan, Sulggi A. Lee

List of authors in order
Landing page: https://doi.org/10.6084/m9.figshare.13620170

Publisher landing page
Open access: Yes

Whether a free full text is available
OA status: gold

Open access status per OpenAlex
OA URL: https://doi.org/10.6084/m9.figshare.13620170

Direct OA link when available
Concepts: Peripheral blood mononuclear cell, RNA, Peripheral blood, Biology, Molecular biology, Computational biology, Immunology, Cell biology, Chemistry, Gene, Genetics, In vitro

Top concepts (fields/topics) attached by OpenAlex
Cited by: 0

Total citation count in OpenAlex
Related works (count): 10

Other works algorithmically related by OpenAlex

Full payload

id	https://openalex.org/W4394292919
doi	https://doi.org/10.6084/m9.figshare.13620170
ids.doi	https://doi.org/10.6084/m9.figshare.13620170
ids.openalex	https://openalex.org/W4394292919
fwci
type	dataset
title	Additional file 2 of No detectable alloreactive transcriptional responses under standard sample preparation conditions during donor-multiplexed single-cell RNA sequencing of peripheral blood mononuclear cells
biblio.issue
biblio.volume
biblio.last_page
biblio.first_page
topics[0].id	https://openalex.org/T11289
topics[0].field.id	https://openalex.org/fields/13
topics[0].field.display_name	Biochemistry, Genetics and Molecular Biology
topics[0].score	0.9937000274658203
topics[0].domain.id	https://openalex.org/domains/1
topics[0].domain.display_name	Life Sciences
topics[0].subfield.id	https://openalex.org/subfields/1312
topics[0].subfield.display_name	Molecular Biology
topics[0].display_name	Single-cell and spatial transcriptomics
topics[1].id	https://openalex.org/T11287
topics[1].field.id	https://openalex.org/fields/13
topics[1].field.display_name	Biochemistry, Genetics and Molecular Biology
topics[1].score	0.9843999743461609
topics[1].domain.id	https://openalex.org/domains/1
topics[1].domain.display_name	Life Sciences
topics[1].subfield.id	https://openalex.org/subfields/1306
topics[1].subfield.display_name	Cancer Research
topics[1].display_name	Cancer Genomics and Diagnostics
topics[2].id	https://openalex.org/T11970
topics[2].field.id	https://openalex.org/fields/13
topics[2].field.display_name	Biochemistry, Genetics and Molecular Biology
topics[2].score	0.9470999836921692
topics[2].domain.id	https://openalex.org/domains/1
topics[2].domain.display_name	Life Sciences
topics[2].subfield.id	https://openalex.org/subfields/1312
topics[2].subfield.display_name	Molecular Biology
topics[2].display_name	Molecular Biology Techniques and Applications
is_xpac	False
apc_list
apc_paid
concepts[0].id	https://openalex.org/C137061746
concepts[0].level	3
concepts[0].score	0.7533259391784668
concepts[0].wikidata	https://www.wikidata.org/wiki/Q736033
concepts[0].display_name	Peripheral blood mononuclear cell
concepts[1].id	https://openalex.org/C67705224
concepts[1].level	3
concepts[1].score	0.6384822726249695
concepts[1].wikidata	https://www.wikidata.org/wiki/Q11053
concepts[1].display_name	RNA
concepts[2].id	https://openalex.org/C3017910909
concepts[2].level	2
concepts[2].score	0.538367509841919
concepts[2].wikidata	https://www.wikidata.org/wiki/Q618363
concepts[2].display_name	Peripheral blood
concepts[3].id	https://openalex.org/C86803240
concepts[3].level	0
concepts[3].score	0.4850177466869354
concepts[3].wikidata	https://www.wikidata.org/wiki/Q420
concepts[3].display_name	Biology
concepts[4].id	https://openalex.org/C153911025
concepts[4].level	1
concepts[4].score	0.4481187164783478
concepts[4].wikidata	https://www.wikidata.org/wiki/Q7202
concepts[4].display_name	Molecular biology
concepts[5].id	https://openalex.org/C70721500
concepts[5].level	1
concepts[5].score	0.34741711616516113
concepts[5].wikidata	https://www.wikidata.org/wiki/Q177005
concepts[5].display_name	Computational biology
concepts[6].id	https://openalex.org/C203014093
concepts[6].level	1
concepts[6].score	0.3472858667373657
concepts[6].wikidata	https://www.wikidata.org/wiki/Q101929
concepts[6].display_name	Immunology
concepts[7].id	https://openalex.org/C95444343
concepts[7].level	1
concepts[7].score	0.33662956953048706
concepts[7].wikidata	https://www.wikidata.org/wiki/Q7141
concepts[7].display_name	Cell biology
concepts[8].id	https://openalex.org/C185592680
concepts[8].level	0
concepts[8].score	0.32715925574302673
concepts[8].wikidata	https://www.wikidata.org/wiki/Q2329
concepts[8].display_name	Chemistry
concepts[9].id	https://openalex.org/C104317684
concepts[9].level	2
concepts[9].score	0.311628133058548
concepts[9].wikidata	https://www.wikidata.org/wiki/Q7187
concepts[9].display_name	Gene
concepts[10].id	https://openalex.org/C54355233
concepts[10].level	1
concepts[10].score	0.2656131088733673
concepts[10].wikidata	https://www.wikidata.org/wiki/Q7162
concepts[10].display_name	Genetics
concepts[11].id	https://openalex.org/C202751555
concepts[11].level	2
concepts[11].score	0.07924449443817139
concepts[11].wikidata	https://www.wikidata.org/wiki/Q221681
concepts[11].display_name	In vitro
keywords[0].id	https://openalex.org/keywords/peripheral-blood-mononuclear-cell
keywords[0].score	0.7533259391784668
keywords[0].display_name	Peripheral blood mononuclear cell
keywords[1].id	https://openalex.org/keywords/rna
keywords[1].score	0.6384822726249695
keywords[1].display_name	RNA
keywords[2].id	https://openalex.org/keywords/peripheral-blood
keywords[2].score	0.538367509841919
keywords[2].display_name	Peripheral blood
keywords[3].id	https://openalex.org/keywords/biology
keywords[3].score	0.4850177466869354
keywords[3].display_name	Biology
keywords[4].id	https://openalex.org/keywords/molecular-biology
keywords[4].score	0.4481187164783478
keywords[4].display_name	Molecular biology
keywords[5].id	https://openalex.org/keywords/computational-biology
keywords[5].score	0.34741711616516113
keywords[5].display_name	Computational biology
keywords[6].id	https://openalex.org/keywords/immunology
keywords[6].score	0.3472858667373657
keywords[6].display_name	Immunology
keywords[7].id	https://openalex.org/keywords/cell-biology
keywords[7].score	0.33662956953048706
keywords[7].display_name	Cell biology
keywords[8].id	https://openalex.org/keywords/chemistry
keywords[8].score	0.32715925574302673
keywords[8].display_name	Chemistry
keywords[9].id	https://openalex.org/keywords/gene
keywords[9].score	0.311628133058548
keywords[9].display_name	Gene
keywords[10].id	https://openalex.org/keywords/genetics
keywords[10].score	0.2656131088733673
keywords[10].display_name	Genetics
keywords[11].id	https://openalex.org/keywords/in-vitro
keywords[11].score	0.07924449443817139
keywords[11].display_name	In vitro
language	en
locations[0].id	doi:10.6084/m9.figshare.13620170
locations[0].is_oa	True
locations[0].source
locations[0].license	cc-by
locations[0].pdf_url
locations[0].version
locations[0].raw_type	dataset
locations[0].license_id	https://openalex.org/licenses/cc-by
locations[0].is_accepted	False
locations[0].is_published
locations[0].raw_source_name
locations[0].landing_page_url	https://doi.org/10.6084/m9.figshare.13620170
indexed_in	datacite
authorships[0].author.id	https://openalex.org/A5049526512
authorships[0].author.orcid	https://orcid.org/0000-0001-6923-9341
authorships[0].author.display_name	Christopher S. McGinnis
authorships[0].author_position	first
authorships[0].raw_author_name	Christopher S. McGinnis
authorships[0].is_corresponding	False
authorships[1].author.id	https://openalex.org/A5091590002
authorships[1].author.orcid	https://orcid.org/0000-0001-7314-4556
authorships[1].author.display_name	David Siegel
authorships[1].author_position	middle
authorships[1].raw_author_name	David A. Siegel
authorships[1].is_corresponding	False
authorships[2].author.id	https://openalex.org/A5031682285
authorships[2].author.orcid	https://orcid.org/0000-0002-2414-1241
authorships[2].author.display_name	Guorui Xie
authorships[2].author_position	middle
authorships[2].raw_author_name	Guorui Xie
authorships[2].is_corresponding	False
authorships[3].author.id	https://openalex.org/A5048117347
authorships[3].author.orcid	https://orcid.org/0000-0001-6980-2368
authorships[3].author.display_name	George C. Hartoularos
authorships[3].author_position	middle
authorships[3].raw_author_name	George Hartoularos
authorships[3].is_corresponding	False
authorships[4].author.id	https://openalex.org/A5054359071
authorships[4].author.orcid	https://orcid.org/0000-0001-5619-2767
authorships[4].author.display_name	Mars Stone
authorships[4].author_position	middle
authorships[4].raw_author_name	Mars Stone
authorships[4].is_corresponding	False
authorships[5].author.id	https://openalex.org/A5005819504
authorships[5].author.orcid	https://orcid.org/0000-0001-6560-3783
authorships[5].author.display_name	Chun Ye
authorships[5].author_position	middle
authorships[5].raw_author_name	Chun J. Ye
authorships[5].is_corresponding	False
authorships[6].author.id	https://openalex.org/A5052760522
authorships[6].author.orcid	https://orcid.org/0000-0001-7803-1219
authorships[6].author.display_name	Zev J. Gartner
authorships[6].author_position	middle
authorships[6].raw_author_name	Zev J. Gartner
authorships[6].is_corresponding	False
authorships[7].author.id	https://openalex.org/A5082315352
authorships[7].author.orcid	https://orcid.org/0000-0002-5464-1976
authorships[7].author.display_name	Nadia R. Roan
authorships[7].author_position	middle
authorships[7].raw_author_name	Nadia R. Roan
authorships[7].is_corresponding	False
authorships[8].author.id	https://openalex.org/A5080022594
authorships[8].author.orcid	https://orcid.org/0000-0003-1560-2250
authorships[8].author.display_name	Sulggi A. Lee
authorships[8].author_position	last
authorships[8].raw_author_name	Sulggi A. Lee
authorships[8].is_corresponding	False
has_content.pdf	False
has_content.grobid_xml	False
is_paratext	False
open_access.is_oa	True
open_access.oa_url	https://doi.org/10.6084/m9.figshare.13620170
open_access.oa_status	gold
open_access.any_repository_has_fulltext	False
created_date	2025-10-10T00:00:00
display_name	Additional file 2 of No detectable alloreactive transcriptional responses under standard sample preparation conditions during donor-multiplexed single-cell RNA sequencing of peripheral blood mononuclear cells
has_fulltext	False
is_retracted	False
updated_date	2025-11-06T06:51:31.235846
primary_topic.id	https://openalex.org/T11289
primary_topic.field.id	https://openalex.org/fields/13
primary_topic.field.display_name	Biochemistry, Genetics and Molecular Biology
primary_topic.score	0.9937000274658203
primary_topic.domain.id	https://openalex.org/domains/1
primary_topic.domain.display_name	Life Sciences
primary_topic.subfield.id	https://openalex.org/subfields/1312
primary_topic.subfield.display_name	Molecular Biology
primary_topic.display_name	Single-cell and spatial transcriptomics
related_works	https://openalex.org/W2073641733, https://openalex.org/W2318823989, https://openalex.org/W2376209413, https://openalex.org/W2366209661, https://openalex.org/W2902056154, https://openalex.org/W4361263123, https://openalex.org/W952398078, https://openalex.org/W2351297599, https://openalex.org/W3194712462, https://openalex.org/W1971747933
cited_by_count	0
locations_count	1
best_oa_location.id	doi:10.6084/m9.figshare.13620170
best_oa_location.is_oa	True
best_oa_location.source
best_oa_location.license	cc-by
best_oa_location.pdf_url
best_oa_location.version
best_oa_location.raw_type	dataset
best_oa_location.license_id	https://openalex.org/licenses/cc-by
best_oa_location.is_accepted	False
best_oa_location.is_published	False
best_oa_location.raw_source_name
best_oa_location.landing_page_url	https://doi.org/10.6084/m9.figshare.13620170
primary_location.id	doi:10.6084/m9.figshare.13620170
primary_location.is_oa	True
primary_location.source
primary_location.license	cc-by
primary_location.pdf_url
primary_location.version
primary_location.raw_type	dataset
primary_location.license_id	https://openalex.org/licenses/cc-by
primary_location.is_accepted	False
primary_location.is_published	False
primary_location.raw_source_name
primary_location.landing_page_url	https://doi.org/10.6084/m9.figshare.13620170
publication_date	2021-01-01
publication_year	2021
referenced_works_count	0
abstract_inverted_index.1.	5
abstract_inverted_index.2.	26
abstract_inverted_index.2:	2
abstract_inverted_index.as	15, 36
abstract_inverted_index.by	17, 38
abstract_inverted_index.et	42
abstract_inverted_index.of	7, 28
abstract_inverted_index.al.	43
abstract_inverted_index.for	19, 40
abstract_inverted_index.GSEA	18, 39
abstract_inverted_index.List	6, 27
abstract_inverted_index.PBMC	12, 21, 33, 44
abstract_inverted_index.cell	13, 34
abstract_inverted_index.file	1
abstract_inverted_index.gene	9, 30
abstract_inverted_index.sets	10, 31
abstract_inverted_index.Table	4, 25
abstract_inverted_index.Zheng	41
abstract_inverted_index.types	14, 35
abstract_inverted_index.8-donor	20
abstract_inverted_index.amongst	11, 32
abstract_inverted_index.dataset.	23, 46
abstract_inverted_index.enriched	8, 29
abstract_inverted_index.scRNA-seq	22, 45
abstract_inverted_index.Additional	0
abstract_inverted_index.determined	16, 37
abstract_inverted_index.Supplemental	3, 24
cited_by_percentile_year
countries_distinct_count	0
institutions_distinct_count	9
citation_normalized_percentile