Additional file 3 of A comprehensive enhancer screen identifies TRAM2 as a key and novel mediator of YAP oncogenesis Article Swipe

View

Li Li , Alejandro P. Ugalde , Colinda L. G. J. Scheele , Sebastian M. Dieter , Remco Nagel , Jin Ma , Abhijeet Pataskar , Gözde Korkmaz , Ran Elkon , Miao‐Ping Chien , You Li , Pin-Rui Su , Onno B. Bleijerveld , Maarten Altelaar , Lyubomir Momchev , Zohar Manber , Ruiqi Han , Pieter C. Van Breugel , Rui Lopes , Peter ten Dijke , Jacco van Rheenen , Reuven Agami ·

YOU? · · 2021 · Open Access · · DOI: https://doi.org/10.6084/m9.figshare.13668213

Additional file 3: Table S2. CRISPR screen analysis.

Related Topics

Lock And Key

Computational Biology

Concepts

Mediator Key (lock) Enhancer Carcinogenesis Computational biology Computer science Biology World Wide Web Cell biology Genetics Operating system Transcription factor Cancer Gene

Metadata

Type: dataset
Language: en
Landing Page: https://doi.org/10.6084/m9.figshare.13668213
OA Status: gold
References: 6
Related Works: 10
OpenAlex ID: https://openalex.org/W4394085734

All OpenAlex metadata

Raw OpenAlex JSON

OpenAlex ID: https://openalex.org/W4394085734

Canonical identifier for this work in OpenAlex
DOI: https://doi.org/10.6084/m9.figshare.13668213

Digital Object Identifier
Title: Additional file 3 of A comprehensive enhancer screen identifies TRAM2 as a key and novel mediator of YAP oncogenesis

Work title
Type: dataset

OpenAlex work type
Language: en

Primary language
Publication year: 2021

Year of publication
Publication date: 2021-01-01

Full publication date if available
Authors: Li Li, Alejandro P. Ugalde, Colinda L. G. J. Scheele, Sebastian M. Dieter, Remco Nagel, Jin Ma, Abhijeet Pataskar, Gözde Korkmaz, Ran Elkon, Miao‐Ping Chien, You Li, Pin-Rui Su, Onno B. Bleijerveld, Maarten Altelaar, Lyubomir Momchev, Zohar Manber, Ruiqi Han, Pieter C. Van Breugel, Rui Lopes, Peter ten Dijke, Jacco van Rheenen, Reuven Agami

List of authors in order
Landing page: https://doi.org/10.6084/m9.figshare.13668213

Publisher landing page
Open access: Yes

Whether a free full text is available
OA status: gold

Open access status per OpenAlex
OA URL: https://doi.org/10.6084/m9.figshare.13668213

Direct OA link when available
Concepts: Mediator, Key (lock), Enhancer, Carcinogenesis, Computational biology, Computer science, Biology, World Wide Web, Cell biology, Genetics, Operating system, Transcription factor, Cancer, Gene

Top concepts (fields/topics) attached by OpenAlex
Cited by: 0

Total citation count in OpenAlex
References (count): 6

Number of works referenced by this work
Related works (count): 10

Other works algorithmically related by OpenAlex

Full payload

id	https://openalex.org/W4394085734
doi	https://doi.org/10.6084/m9.figshare.13668213
ids.doi	https://doi.org/10.6084/m9.figshare.13668213
ids.openalex	https://openalex.org/W4394085734
fwci
type	dataset
title	Additional file 3 of A comprehensive enhancer screen identifies TRAM2 as a key and novel mediator of YAP oncogenesis
biblio.issue
biblio.volume
biblio.last_page
biblio.first_page
topics[0].id	https://openalex.org/T12065
topics[0].field.id	https://openalex.org/fields/13
topics[0].field.display_name	Biochemistry, Genetics and Molecular Biology
topics[0].score	0.9761000275611877
topics[0].domain.id	https://openalex.org/domains/1
topics[0].domain.display_name	Life Sciences
topics[0].subfield.id	https://openalex.org/subfields/1307
topics[0].subfield.display_name	Cell Biology
topics[0].display_name	Hippo pathway signaling and YAP/TAZ
topics[1].id	https://openalex.org/T11713
topics[1].field.id	https://openalex.org/fields/27
topics[1].field.display_name	Medicine
topics[1].score	0.9470000267028809
topics[1].domain.id	https://openalex.org/domains/4
topics[1].domain.display_name	Health Sciences
topics[1].subfield.id	https://openalex.org/subfields/2746
topics[1].subfield.display_name	Surgery
topics[1].display_name	Genital Health and Disease
is_xpac	False
apc_list
apc_paid
concepts[0].id	https://openalex.org/C2107291
concepts[0].level	2
concepts[0].score	0.8577561378479004
concepts[0].wikidata	https://www.wikidata.org/wiki/Q14886885
concepts[0].display_name	Mediator
concepts[1].id	https://openalex.org/C26517878
concepts[1].level	2
concepts[1].score	0.7542346715927124
concepts[1].wikidata	https://www.wikidata.org/wiki/Q228039
concepts[1].display_name	Key (lock)
concepts[2].id	https://openalex.org/C111936080
concepts[2].level	4
concepts[2].score	0.6834440231323242
concepts[2].wikidata	https://www.wikidata.org/wiki/Q913367
concepts[2].display_name	Enhancer
concepts[3].id	https://openalex.org/C555283112
concepts[3].level	3
concepts[3].score	0.5703110098838806
concepts[3].wikidata	https://www.wikidata.org/wiki/Q1637543
concepts[3].display_name	Carcinogenesis
concepts[4].id	https://openalex.org/C70721500
concepts[4].level	1
concepts[4].score	0.45879361033439636
concepts[4].wikidata	https://www.wikidata.org/wiki/Q177005
concepts[4].display_name	Computational biology
concepts[5].id	https://openalex.org/C41008148
concepts[5].level	0
concepts[5].score	0.4241308271884918
concepts[5].wikidata	https://www.wikidata.org/wiki/Q21198
concepts[5].display_name	Computer science
concepts[6].id	https://openalex.org/C86803240
concepts[6].level	0
concepts[6].score	0.3693486452102661
concepts[6].wikidata	https://www.wikidata.org/wiki/Q420
concepts[6].display_name	Biology
concepts[7].id	https://openalex.org/C136764020
concepts[7].level	1
concepts[7].score	0.3441551625728607
concepts[7].wikidata	https://www.wikidata.org/wiki/Q466
concepts[7].display_name	World Wide Web
concepts[8].id	https://openalex.org/C95444343
concepts[8].level	1
concepts[8].score	0.25884559750556946
concepts[8].wikidata	https://www.wikidata.org/wiki/Q7141
concepts[8].display_name	Cell biology
concepts[9].id	https://openalex.org/C54355233
concepts[9].level	1
concepts[9].score	0.23646730184555054
concepts[9].wikidata	https://www.wikidata.org/wiki/Q7162
concepts[9].display_name	Genetics
concepts[10].id	https://openalex.org/C111919701
concepts[10].level	1
concepts[10].score	0.15711259841918945
concepts[10].wikidata	https://www.wikidata.org/wiki/Q9135
concepts[10].display_name	Operating system
concepts[11].id	https://openalex.org/C86339819
concepts[11].level	3
concepts[11].score	0.10373055934906006
concepts[11].wikidata	https://www.wikidata.org/wiki/Q407384
concepts[11].display_name	Transcription factor
concepts[12].id	https://openalex.org/C121608353
concepts[12].level	2
concepts[12].score	0.09270501136779785
concepts[12].wikidata	https://www.wikidata.org/wiki/Q12078
concepts[12].display_name	Cancer
concepts[13].id	https://openalex.org/C104317684
concepts[13].level	2
concepts[13].score	0.058460086584091187
concepts[13].wikidata	https://www.wikidata.org/wiki/Q7187
concepts[13].display_name	Gene
keywords[0].id	https://openalex.org/keywords/mediator
keywords[0].score	0.8577561378479004
keywords[0].display_name	Mediator
keywords[1].id	https://openalex.org/keywords/key
keywords[1].score	0.7542346715927124
keywords[1].display_name	Key (lock)
keywords[2].id	https://openalex.org/keywords/enhancer
keywords[2].score	0.6834440231323242
keywords[2].display_name	Enhancer
keywords[3].id	https://openalex.org/keywords/carcinogenesis
keywords[3].score	0.5703110098838806
keywords[3].display_name	Carcinogenesis
keywords[4].id	https://openalex.org/keywords/computational-biology
keywords[4].score	0.45879361033439636
keywords[4].display_name	Computational biology
keywords[5].id	https://openalex.org/keywords/computer-science
keywords[5].score	0.4241308271884918
keywords[5].display_name	Computer science
keywords[6].id	https://openalex.org/keywords/biology
keywords[6].score	0.3693486452102661
keywords[6].display_name	Biology
keywords[7].id	https://openalex.org/keywords/world-wide-web
keywords[7].score	0.3441551625728607
keywords[7].display_name	World Wide Web
keywords[8].id	https://openalex.org/keywords/cell-biology
keywords[8].score	0.25884559750556946
keywords[8].display_name	Cell biology
keywords[9].id	https://openalex.org/keywords/genetics
keywords[9].score	0.23646730184555054
keywords[9].display_name	Genetics
keywords[10].id	https://openalex.org/keywords/operating-system
keywords[10].score	0.15711259841918945
keywords[10].display_name	Operating system
keywords[11].id	https://openalex.org/keywords/transcription-factor
keywords[11].score	0.10373055934906006
keywords[11].display_name	Transcription factor
keywords[12].id	https://openalex.org/keywords/cancer
keywords[12].score	0.09270501136779785
keywords[12].display_name	Cancer
keywords[13].id	https://openalex.org/keywords/gene
keywords[13].score	0.058460086584091187
keywords[13].display_name	Gene
language	en
locations[0].id	doi:10.6084/m9.figshare.13668213
locations[0].is_oa	True
locations[0].source
locations[0].license	cc-by
locations[0].pdf_url
locations[0].version
locations[0].raw_type	dataset
locations[0].license_id	https://openalex.org/licenses/cc-by
locations[0].is_accepted	False
locations[0].is_published
locations[0].raw_source_name
locations[0].landing_page_url	https://doi.org/10.6084/m9.figshare.13668213
indexed_in	datacite
authorships[0].author.id	https://openalex.org/A5100361222
authorships[0].author.orcid	https://orcid.org/0000-0002-6920-3311
authorships[0].author.display_name	Li Li
authorships[0].author_position	first
authorships[0].raw_author_name	Li Li
authorships[0].is_corresponding	False
authorships[1].author.id	https://openalex.org/A5050796917
authorships[1].author.orcid	https://orcid.org/0000-0003-2522-0627
authorships[1].author.display_name	Alejandro P. Ugalde
authorships[1].author_position	middle
authorships[1].raw_author_name	Alejandro P. Ugalde
authorships[1].is_corresponding	False
authorships[2].author.id	https://openalex.org/A5051079326
authorships[2].author.orcid	https://orcid.org/0000-0001-8999-5451
authorships[2].author.display_name	Colinda L. G. J. Scheele
authorships[2].author_position	middle
authorships[2].raw_author_name	Colinda L. G. J. Scheele
authorships[2].is_corresponding	False
authorships[3].author.id	https://openalex.org/A5028602533
authorships[3].author.orcid	https://orcid.org/0000-0003-1324-7638
authorships[3].author.display_name	Sebastian M. Dieter
authorships[3].author_position	middle
authorships[3].raw_author_name	Sebastian M. Dieter
authorships[3].is_corresponding	False
authorships[4].author.id	https://openalex.org/A5035790268
authorships[4].author.orcid
authorships[4].author.display_name	Remco Nagel
authorships[4].author_position	middle
authorships[4].raw_author_name	Remco Nagel
authorships[4].is_corresponding	False
authorships[5].author.id	https://openalex.org/A5027779346
authorships[5].author.orcid	https://orcid.org/0000-0002-5343-1352
authorships[5].author.display_name	Jin Ma
authorships[5].author_position	middle
authorships[5].raw_author_name	Jin Ma
authorships[5].is_corresponding	False
authorships[6].author.id	https://openalex.org/A5065025244
authorships[6].author.orcid	https://orcid.org/0000-0003-1537-3371
authorships[6].author.display_name	Abhijeet Pataskar
authorships[6].author_position	middle
authorships[6].raw_author_name	Abhijeet Pataskar
authorships[6].is_corresponding	False
authorships[7].author.id	https://openalex.org/A5089151419
authorships[7].author.orcid	https://orcid.org/0000-0002-3574-1015
authorships[7].author.display_name	Gözde Korkmaz
authorships[7].author_position	middle
authorships[7].raw_author_name	Gozde Korkmaz
authorships[7].is_corresponding	False
authorships[8].author.id	https://openalex.org/A5043516734
authorships[8].author.orcid	https://orcid.org/0000-0003-3440-1286
authorships[8].author.display_name	Ran Elkon
authorships[8].author_position	middle
authorships[8].raw_author_name	Ran Elkon
authorships[8].is_corresponding	False
authorships[9].author.id	https://openalex.org/A5076454824
authorships[9].author.orcid	https://orcid.org/0000-0002-6087-4688
authorships[9].author.display_name	Miao‐Ping Chien
authorships[9].author_position	middle
authorships[9].raw_author_name	Miao-Ping Chien
authorships[9].is_corresponding	False
authorships[10].author.id	https://openalex.org/A5100401821
authorships[10].author.orcid	https://orcid.org/0000-0002-0426-7760
authorships[10].author.display_name	You Li
authorships[10].author_position	middle
authorships[10].raw_author_name	Li You
authorships[10].is_corresponding	False
authorships[11].author.id	https://openalex.org/A5006371749
authorships[11].author.orcid
authorships[11].author.display_name	Pin-Rui Su
authorships[11].author_position	middle
authorships[11].raw_author_name	Pin-Rui Su
authorships[11].is_corresponding	False
authorships[12].author.id	https://openalex.org/A5066696136
authorships[12].author.orcid	https://orcid.org/0000-0002-9395-2347
authorships[12].author.display_name	Onno B. Bleijerveld
authorships[12].author_position	middle
authorships[12].raw_author_name	Onno B. Bleijerveld
authorships[12].is_corresponding	False
authorships[13].author.id	https://openalex.org/A5013176510
authorships[13].author.orcid	https://orcid.org/0000-0001-5093-5945
authorships[13].author.display_name	Maarten Altelaar
authorships[13].author_position	middle
authorships[13].raw_author_name	Maarten Altelaar
authorships[13].is_corresponding	False
authorships[14].author.id	https://openalex.org/A5077457267
authorships[14].author.orcid
authorships[14].author.display_name	Lyubomir Momchev
authorships[14].author_position	middle
authorships[14].raw_author_name	Lyubomir Momchev
authorships[14].is_corresponding	False
authorships[15].author.id	https://openalex.org/A5012078308
authorships[15].author.orcid
authorships[15].author.display_name	Zohar Manber
authorships[15].author_position	middle
authorships[15].raw_author_name	Zohar Manber
authorships[15].is_corresponding	False
authorships[16].author.id	https://openalex.org/A5052678742
authorships[16].author.orcid	https://orcid.org/0000-0001-7212-0747
authorships[16].author.display_name	Ruiqi Han
authorships[16].author_position	middle
authorships[16].raw_author_name	Ruiqi Han
authorships[16].is_corresponding	False
authorships[17].author.id	https://openalex.org/A5070059408
authorships[17].author.orcid
authorships[17].author.display_name	Pieter C. Van Breugel
authorships[17].author_position	middle
authorships[17].raw_author_name	Pieter C. Van Breugel
authorships[17].is_corresponding	False
authorships[18].author.id	https://openalex.org/A5081577679
authorships[18].author.orcid	https://orcid.org/0000-0003-3474-676X
authorships[18].author.display_name	Rui Lopes
authorships[18].author_position	middle
authorships[18].raw_author_name	Rui Lopes
authorships[18].is_corresponding	False
authorships[19].author.id	https://openalex.org/A5046914597
authorships[19].author.orcid	https://orcid.org/0000-0002-7234-342X
authorships[19].author.display_name	Peter ten Dijke
authorships[19].author_position	middle
authorships[19].raw_author_name	Peter Ten Dijke
authorships[19].is_corresponding	False
authorships[20].author.id	https://openalex.org/A5055964450
authorships[20].author.orcid	https://orcid.org/0000-0001-8175-1647
authorships[20].author.display_name	Jacco van Rheenen
authorships[20].author_position	middle
authorships[20].raw_author_name	Jacco Van Rheenen
authorships[20].is_corresponding	False
authorships[21].author.id	https://openalex.org/A5079323488
authorships[21].author.orcid	https://orcid.org/0000-0002-2848-2473
authorships[21].author.display_name	Reuven Agami
authorships[21].author_position	last
authorships[21].raw_author_name	Reuven Agami
authorships[21].is_corresponding	False
has_content.pdf	False
has_content.grobid_xml	False
is_paratext	False
open_access.is_oa	True
open_access.oa_url	https://doi.org/10.6084/m9.figshare.13668213
open_access.oa_status	gold
open_access.any_repository_has_fulltext	False
created_date	2025-10-10T00:00:00
display_name	Additional file 3 of A comprehensive enhancer screen identifies TRAM2 as a key and novel mediator of YAP oncogenesis
has_fulltext	False
is_retracted	False
updated_date	2025-11-06T06:51:31.235846
primary_topic.id	https://openalex.org/T12065
primary_topic.field.id	https://openalex.org/fields/13
primary_topic.field.display_name	Biochemistry, Genetics and Molecular Biology
primary_topic.score	0.9761000275611877
primary_topic.domain.id	https://openalex.org/domains/1
primary_topic.domain.display_name	Life Sciences
primary_topic.subfield.id	https://openalex.org/subfields/1307
primary_topic.subfield.display_name	Cell Biology
primary_topic.display_name	Hippo pathway signaling and YAP/TAZ
related_works	https://openalex.org/W2113330652, https://openalex.org/W2061914098, https://openalex.org/W4309683845, https://openalex.org/W2118646732, https://openalex.org/W4387565139, https://openalex.org/W4389440207, https://openalex.org/W2152841149, https://openalex.org/W2586783543, https://openalex.org/W4387598842, https://openalex.org/W2973036402
cited_by_count	0
locations_count	1
best_oa_location.id	doi:10.6084/m9.figshare.13668213
best_oa_location.is_oa	True
best_oa_location.source
best_oa_location.license	cc-by
best_oa_location.pdf_url
best_oa_location.version
best_oa_location.raw_type	dataset
best_oa_location.license_id	https://openalex.org/licenses/cc-by
best_oa_location.is_accepted	False
best_oa_location.is_published	False
best_oa_location.raw_source_name
best_oa_location.landing_page_url	https://doi.org/10.6084/m9.figshare.13668213
primary_location.id	doi:10.6084/m9.figshare.13668213
primary_location.is_oa	True
primary_location.source
primary_location.license	cc-by
primary_location.pdf_url
primary_location.version
primary_location.raw_type	dataset
primary_location.license_id	https://openalex.org/licenses/cc-by
primary_location.is_accepted	False
primary_location.is_published	False
primary_location.raw_source_name
primary_location.landing_page_url	https://doi.org/10.6084/m9.figshare.13668213
publication_date	2021-01-01
publication_year	2021
referenced_works	https://openalex.org/W1995160678, https://openalex.org/W2945535500, https://openalex.org/W2944489089, https://openalex.org/W2022993325, https://openalex.org/W2270544154, https://openalex.org/W2170551349
referenced_works_count	6
abstract_inverted_index.3:	2
abstract_inverted_index.S2.	4
abstract_inverted_index.file	1
abstract_inverted_index.Table	3
abstract_inverted_index.CRISPR	5
abstract_inverted_index.screen	6
abstract_inverted_index.analysis.	7
abstract_inverted_index.Additional	0
cited_by_percentile_year
countries_distinct_count	0
institutions_distinct_count	22
citation_normalized_percentile