An AI-powered Knowledge Hub for Potato Functional Genomics Article Swipe
Jia Yuxin
,
Li Jinye
,
Jia Yudong
,
Li Futing
,
Su Xiaoqi
,
Luo Jilin
,
Dong Yarui
,
Sun Chunyan
,
Cui Qinghan
,
Xiaotian Li
,
Li Axiu
,
Yi Shang
,
Zhu Yujuan
,
Sanwen Huang
·
YOU?
·
· 2025
· Open Access
·
· DOI: https://doi.org/10.48550/arxiv.2506.00082
YOU?
·
· 2025
· Open Access
·
· DOI: https://doi.org/10.48550/arxiv.2506.00082
Potato functional genomics lags due to unsystematic gene information curation, gene identifier inconsistencies across reference genome versions, and the increasing volume of research publications. To address these limitations, we developed the Potato Knowledge Hub (http://www.potato-ai.top), leveraging Large Language Models (LLMs) and a systematically curated collection of over 3,200 high-quality potato research papers spanning over 120 years. This platform integrates two key modules: a functional gene database containing 2,571 literature-reported genes, meticulously mapped to the latest DMv8.1 reference genome with resolved nomenclature discrepancies and links to original publications; and a potato knowledge base. The knowledge base, built using a Retrieval-Augmented Generation (RAG) architecture, accurately answers research queries with literature citations, mitigating LLM "hallucination." Users can interact with the hub via a natural language AI agent, "Potato Research Assistant," for querying specialized knowledge, retrieving gene information, and extracting sequences. The continuously updated Potato Knowledge Hub aims to be a comprehensive resource, fostering advancements in potato functional genomics and supporting breeding programs.
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Metadata
- Type
- preprint
- Language
- en
- Landing Page
- http://arxiv.org/abs/2506.00082
- https://arxiv.org/pdf/2506.00082
- OA Status
- green
- OpenAlex ID
- https://openalex.org/W4414888080
All OpenAlex metadata
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https://openalex.org/W4414888080Canonical identifier for this work in OpenAlex
- DOI
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https://doi.org/10.48550/arxiv.2506.00082Digital Object Identifier
- Title
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An AI-powered Knowledge Hub for Potato Functional GenomicsWork title
- Type
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preprintOpenAlex work type
- Language
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enPrimary language
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2025Year of publication
- Publication date
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2025-05-30Full publication date if available
- Authors
-
Jia Yuxin, Li Jinye, Jia Yudong, Li Futing, Su Xiaoqi, Luo Jilin, Dong Yarui, Sun Chunyan, Cui Qinghan, Xiaotian Li, Li Axiu, Yi Shang, Zhu Yujuan, Sanwen HuangList of authors in order
- Landing page
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https://arxiv.org/abs/2506.00082Publisher landing page
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https://arxiv.org/pdf/2506.00082Direct link to full text PDF
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YesWhether a free full text is available
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greenOpen access status per OpenAlex
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https://arxiv.org/pdf/2506.00082Direct OA link when available
- Cited by
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0Total citation count in OpenAlex
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