Antimicrobial Resistance Surveillance: Data Harmonisation and Data Selection within Secondary Data Use Article Swipe
Sinja Bleischwitz
,
Tristan Winkelmann
,
Yvonne Pfeifer
,
Martin A. Fischer
,
Niels Pfennigwerth
,
Jens A. Hammerl
,
Ulrike Binsker
,
Jörg B. Hans
,
Sören Gatermann
,
Annemarie Käsbohrer
,
Guido Werner
,
Lothar Kreienbrock
·
YOU?
·
· 2024
· Open Access
·
· DOI: https://doi.org/10.3390/antibiotics13070656
YOU?
·
· 2024
· Open Access
·
· DOI: https://doi.org/10.3390/antibiotics13070656
Resistance to last-resort antibiotics is a global threat to public health. Therefore, surveillance and monitoring systems for antimicrobial resistance should be established on a national and international scale. For the development of a One Health surveillance system, we collected exemplary data on carbapenem and colistin-resistant bacterial isolates from human, animal, food, and environmental sources. We pooled secondary data from routine screenings, hospital outbreak investigations, and studies on antimicrobial resistance. For a joint One Health evaluation, this study incorporates epidemiological metadata with phenotypic resistance information and molecular data on the isolate level. To harmonise the heterogeneous original information for the intended use, we developed a generic strategy. By defining and categorising variables, followed by plausibility checks, we created a catalogue for prospective data collections and applied it to our dataset, enabling us to perform preliminary descriptive statistical analyses. This study shows the complexity of data management using heterogeneous secondary data pools and gives an insight into the early stages of the development of an AMR surveillance programme using secondary data.
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Metadata
- Type
- article
- Language
- en
- Landing Page
- https://doi.org/10.3390/antibiotics13070656
- OA Status
- gold
- Cited By
- 1
- References
- 35
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W4400721569
All OpenAlex metadata
Raw OpenAlex JSON
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https://openalex.org/W4400721569Canonical identifier for this work in OpenAlex
- DOI
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https://doi.org/10.3390/antibiotics13070656Digital Object Identifier
- Title
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Antimicrobial Resistance Surveillance: Data Harmonisation and Data Selection within Secondary Data UseWork title
- Type
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articleOpenAlex work type
- Language
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enPrimary language
- Publication year
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2024Year of publication
- Publication date
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2024-07-16Full publication date if available
- Authors
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Sinja Bleischwitz, Tristan Winkelmann, Yvonne Pfeifer, Martin A. Fischer, Niels Pfennigwerth, Jens A. Hammerl, Ulrike Binsker, Jörg B. Hans, Sören Gatermann, Annemarie Käsbohrer, Guido Werner, Lothar KreienbrockList of authors in order
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https://doi.org/10.3390/antibiotics13070656Publisher landing page
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YesWhether a free full text is available
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goldOpen access status per OpenAlex
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https://doi.org/10.3390/antibiotics13070656Direct OA link when available
- Concepts
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Antibiotic resistance, Metadata, Data management, Environmental health, Colistin, Data science, Computer science, Medicine, Geography, Data mining, Antimicrobial, Biology, Antibiotics, World Wide Web, MicrobiologyTop concepts (fields/topics) attached by OpenAlex
- Cited by
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1Total citation count in OpenAlex
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2025: 1Per-year citation counts (last 5 years)
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10Other works algorithmically related by OpenAlex
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