Associated bacterial communities, confrontation studies, and comparative genomics reveal important interactions between Morchella with Pseudomonas spp. Article Swipe
Guillaume Cailleau
,
Buck Hanson
,
Melissa Cravero
,
Sami Zhioua
,
Patrick Hilpish
,
Celia Ruiz
,
Aaron Robinson
,
Julia M. Kelliher
,
Demosthenes Morales
,
La Verne Gallegos‐Graves
,
Gregory Bonito
,
Patrick Chain
,
Saskia Bindschedler
,
Pilar Junier
·
YOU?
·
· 2023
· Open Access
·
· DOI: https://doi.org/10.3389/ffunb.2023.1285531
YOU?
·
· 2023
· Open Access
·
· DOI: https://doi.org/10.3389/ffunb.2023.1285531
Members of the fungal genus Morchella are widely known for their important ecological roles and significant economic value. In this study, we used amplicon and genome sequencing to characterize bacterial communities associated with sexual fruiting bodies from wild specimens, as well as vegetative mycelium and sclerotia obtained from Morchella isolates grown in vitro . These investigations included diverse representatives from both Elata and Esculenta Morchella clades. Unique bacterial community compositions were observed across the various structures examined, both within and across individual Morchella isolates or specimens. However, specific bacterial taxa were frequently detected in association with certain structures, providing support for an associated core bacterial community. Bacteria from the genus Pseudomonas and Ralstonia constituted the core bacterial associates of Morchella mycelia and sclerotia, while other genera (e.g., Pedobacter spp., Deviosa spp., and Bradyrhizobium spp.) constituted the core bacterial community of fruiting bodies. Furthermore, the importance of Pseudomonas as a key member of the bacteriome was supported by the isolation of several Pseudomonas strains from mycelia during in vitro cultivation. Four of the six mycelial-derived Pseudomonas isolates shared 16S rDNA sequence identity with amplicon sequences recovered directly from the examined fungal structures. Distinct interaction phenotypes (antagonistic or neutral) were observed in confrontation assays between these bacteria and various Morchella isolates. Genome sequences obtained from these Pseudomonas isolates revealed intriguing differences in gene content and annotated functions, specifically with respect to toxin-antitoxin systems, cell adhesion, chitinases, and insecticidal toxins. These genetic differences correlated with the interaction phenotypes. This study provides evidence that Pseudomonas spp. are frequently associated with Morchella and these associations may greatly impact fungal physiology.
Related Topics
Concepts
Biology
Gammaproteobacteria
Stenotrophomonas
Microbiology
Mycelium
Pseudomonas
Botany
Bacteria
16S ribosomal RNA
Genetics
Metadata
- Type
- article
- Language
- en
- Landing Page
- https://doi.org/10.3389/ffunb.2023.1285531
- https://www.frontiersin.org/articles/10.3389/ffunb.2023.1285531/pdf?isPublishedV2=False
- OA Status
- gold
- Cited By
- 4
- References
- 75
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W4389684696
All OpenAlex metadata
Raw OpenAlex JSON
- OpenAlex ID
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https://openalex.org/W4389684696Canonical identifier for this work in OpenAlex
- DOI
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https://doi.org/10.3389/ffunb.2023.1285531Digital Object Identifier
- Title
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Associated bacterial communities, confrontation studies, and comparative genomics reveal important interactions between Morchella with Pseudomonas spp.Work title
- Type
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articleOpenAlex work type
- Language
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enPrimary language
- Publication year
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2023Year of publication
- Publication date
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2023-12-13Full publication date if available
- Authors
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Guillaume Cailleau, Buck Hanson, Melissa Cravero, Sami Zhioua, Patrick Hilpish, Celia Ruiz, Aaron Robinson, Julia M. Kelliher, Demosthenes Morales, La Verne Gallegos‐Graves, Gregory Bonito, Patrick Chain, Saskia Bindschedler, Pilar JunierList of authors in order
- Landing page
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https://doi.org/10.3389/ffunb.2023.1285531Publisher landing page
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https://www.frontiersin.org/articles/10.3389/ffunb.2023.1285531/pdf?isPublishedV2=FalseDirect link to full text PDF
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YesWhether a free full text is available
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goldOpen access status per OpenAlex
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https://www.frontiersin.org/articles/10.3389/ffunb.2023.1285531/pdf?isPublishedV2=FalseDirect OA link when available
- Concepts
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Biology, Gammaproteobacteria, Stenotrophomonas, Microbiology, Mycelium, Pseudomonas, Botany, Bacteria, 16S ribosomal RNA, GeneticsTop concepts (fields/topics) attached by OpenAlex
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4Total citation count in OpenAlex
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2025: 3, 2024: 1Per-year citation counts (last 5 years)
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75Number of works referenced by this work
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10Other works algorithmically related by OpenAlex
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| abstract_inverted_index.vegetative | 42 |
| abstract_inverted_index.Pseudomonas | 110, 146, 161, 174, 214, 250 |
| abstract_inverted_index.association | 94 |
| abstract_inverted_index.chitinases, | 233 |
| abstract_inverted_index.communities | 30 |
| abstract_inverted_index.constituted | 113, 134 |
| abstract_inverted_index.differences | 218, 239 |
| abstract_inverted_index.interaction | 192, 243 |
| abstract_inverted_index.phenotypes. | 244 |
| abstract_inverted_index.physiology. | 264 |
| abstract_inverted_index.significant | 15 |
| abstract_inverted_index.structures, | 97 |
| abstract_inverted_index.structures. | 190 |
| abstract_inverted_index.Furthermore, | 142 |
| abstract_inverted_index.associations | 259 |
| abstract_inverted_index.characterize | 28 |
| abstract_inverted_index.compositions | 69 |
| abstract_inverted_index.cultivation. | 168 |
| abstract_inverted_index.insecticidal | 235 |
| abstract_inverted_index.specifically | 225 |
| abstract_inverted_index.(antagonistic | 194 |
| abstract_inverted_index.confrontation | 200 |
| abstract_inverted_index.Bradyrhizobium | 132 |
| abstract_inverted_index.investigations | 55 |
| abstract_inverted_index.representatives | 58 |
| abstract_inverted_index.toxin-antitoxin | 229 |
| abstract_inverted_index.mycelial-derived | 173 |
| cited_by_percentile_year.max | 97 |
| cited_by_percentile_year.min | 90 |
| corresponding_author_ids | https://openalex.org/A5013897809 |
| countries_distinct_count | 2 |
| institutions_distinct_count | 14 |
| corresponding_institution_ids | https://openalex.org/I57825437 |
| sustainable_development_goals[0].id | https://metadata.un.org/sdg/15 |
| sustainable_development_goals[0].score | 0.5899999737739563 |
| sustainable_development_goals[0].display_name | Life in Land |
| citation_normalized_percentile.value | 0.88275173 |
| citation_normalized_percentile.is_in_top_1_percent | False |
| citation_normalized_percentile.is_in_top_10_percent | False |