Association Mapping of Agronomic traits in Bread Wheat using a high Density 90k SNP Array Article Swipe
Muhammad Ali Sher
,
Abdus Salam Khan
,
Zulfiqar Ali
,
Sultan Habibullah Khan
·
YOU?
·
· 2021
· Open Access
·
· DOI: https://doi.org/10.52700/pjbb.v2i2.91
YOU?
·
· 2021
· Open Access
·
· DOI: https://doi.org/10.52700/pjbb.v2i2.91
A genome-wide association study (GWAS) was performed using a high-density infinium 90K SNP array. We identified a total markers traits associations (MTAs) (p ?0.000) for the following plant traits; days taken to 50% heading(DH), days to 50% maturity (DM), plant height (Ph) cm, flag leaf area cm2 (FLA), tillers number per plant, spike length (SL) cm and grain yield per plant (GP) g. Most of the SNPs were identified in the A and B genome as compared to the D genome. The significant associated SNPs were mainly distributed on the chromosome 2B, 3B, 5A, and 5B. Nine SNPs on chromosome 5A, 2B and 2D were identified having pleiotropic effects The correlation analysis showed a significant positive association among SL, NT, GP. Which depicted that these traits are promising for breeding high yielding wheat cultivars. This study provided useful information of the valuable genetic loci for marker-assisted breeding.
Related Topics
Concepts
Genome-wide association study
Single-nucleotide polymorphism
Biology
SNP
Quantitative trait locus
SNP array
Genetics
Genetic association
Chromosome
Genotype
Gene
Metadata
- Type
- article
- Language
- en
- Landing Page
- https://doi.org/10.52700/pjbb.v2i2.91
- http://pjbb.wum.edu.pk/index.php/ojs/article/download/91/33
- OA Status
- diamond
- References
- 43
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W4205480137
All OpenAlex metadata
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https://doi.org/10.52700/pjbb.v2i2.91Digital Object Identifier
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Association Mapping of Agronomic traits in Bread Wheat using a high Density 90k SNP ArrayWork title
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articleOpenAlex work type
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enPrimary language
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2021Year of publication
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2021-12-31Full publication date if available
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Muhammad Ali Sher, Abdus Salam Khan, Zulfiqar Ali, Sultan Habibullah KhanList of authors in order
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https://doi.org/10.52700/pjbb.v2i2.91Publisher landing page
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https://pjbb.wum.edu.pk/index.php/ojs/article/download/91/33Direct link to full text PDF
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YesWhether a free full text is available
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diamondOpen access status per OpenAlex
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https://pjbb.wum.edu.pk/index.php/ojs/article/download/91/33Direct OA link when available
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Genome-wide association study, Single-nucleotide polymorphism, Biology, SNP, Quantitative trait locus, SNP array, Genetics, Genetic association, Chromosome, Genotype, GeneTop concepts (fields/topics) attached by OpenAlex
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0Total citation count in OpenAlex
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10Other works algorithmically related by OpenAlex
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| abstract_inverted_index.length | 53 |
| abstract_inverted_index.mainly | 86 |
| abstract_inverted_index.number | 49 |
| abstract_inverted_index.plant, | 51 |
| abstract_inverted_index.showed | 112 |
| abstract_inverted_index.traits | 19, 125 |
| abstract_inverted_index.useful | 137 |
| abstract_inverted_index.?0.000) | 23 |
| abstract_inverted_index.effects | 108 |
| abstract_inverted_index.genetic | 142 |
| abstract_inverted_index.genome. | 80 |
| abstract_inverted_index.markers | 18 |
| abstract_inverted_index.tillers | 48 |
| abstract_inverted_index.traits; | 28 |
| abstract_inverted_index.analysis | 111 |
| abstract_inverted_index.breeding | 129 |
| abstract_inverted_index.compared | 76 |
| abstract_inverted_index.depicted | 122 |
| abstract_inverted_index.infinium | 10 |
| abstract_inverted_index.maturity | 37 |
| abstract_inverted_index.positive | 115 |
| abstract_inverted_index.provided | 136 |
| abstract_inverted_index.valuable | 141 |
| abstract_inverted_index.yielding | 131 |
| abstract_inverted_index.breeding. | 146 |
| abstract_inverted_index.following | 26 |
| abstract_inverted_index.performed | 6 |
| abstract_inverted_index.promising | 127 |
| abstract_inverted_index.associated | 83 |
| abstract_inverted_index.chromosome | 90, 99 |
| abstract_inverted_index.cultivars. | 133 |
| abstract_inverted_index.identified | 15, 68, 105 |
| abstract_inverted_index.association | 2, 116 |
| abstract_inverted_index.correlation | 110 |
| abstract_inverted_index.distributed | 87 |
| abstract_inverted_index.genome-wide | 1 |
| abstract_inverted_index.information | 138 |
| abstract_inverted_index.pleiotropic | 107 |
| abstract_inverted_index.significant | 82, 114 |
| abstract_inverted_index.associations | 20 |
| abstract_inverted_index.heading(DH), | 33 |
| abstract_inverted_index.high-density | 9 |
| abstract_inverted_index.marker-assisted | 145 |
| cited_by_percentile_year | |
| countries_distinct_count | 1 |
| institutions_distinct_count | 4 |
| sustainable_development_goals[0].id | https://metadata.un.org/sdg/2 |
| sustainable_development_goals[0].score | 0.6800000071525574 |
| sustainable_development_goals[0].display_name | Zero hunger |
| citation_normalized_percentile.value | 0.11745827 |
| citation_normalized_percentile.is_in_top_1_percent | False |
| citation_normalized_percentile.is_in_top_10_percent | False |