Binding by the Polycomb complex component BMI1 and H2A monoubiquitination shape local and long-range interactions in the Arabidopsis genome Article Swipe
Xiaochang Yin
,
Francisco J. Romero–Campero
,
Minqi Yang
,
Fernando Baile
,
Yuxin Cao
,
Jiayue Shu
,
Lingxiao Luo
,
Dingyue Wang
,
Shang Sun
,
Peng Yan
,
Zhiyun Gong
,
Xiaorong Mo
,
Genji Qin
,
Myriam Calonje
,
Yue Zhou
·
YOU?
·
· 2023
· Open Access
·
· DOI: https://doi.org/10.1093/plcell/koad112
YOU?
·
· 2023
· Open Access
·
· DOI: https://doi.org/10.1093/plcell/koad112
Three-dimensional (3D) chromatin organization is highly dynamic during development and seems to play a crucial role in regulating gene expression. Self-interacting domains, commonly called topologically associating domains (TADs) or compartment domains (CDs), have been proposed as the basic structural units of chromatin organization. Surprisingly, although these units have been found in several plant species, they escaped detection in Arabidopsis (Arabidopsis thaliana). Here, we show that the Arabidopsis genome is partitioned into contiguous CDs with different epigenetic features, which are required to maintain appropriate intra-CD and long-range interactions. Consistent with this notion, the histone-modifying Polycomb group machinery is involved in 3D chromatin organization. Yet, while it is clear that Polycomb repressive complex 2 (PRC2)-mediated trimethylation of histone H3 on lysine 27 (H3K27me3) helps establish local and long-range chromatin interactions in plants, the implications of PRC1-mediated histone H2A monoubiquitination on lysine 121 (H2AK121ub) are unclear. We found that PRC1, together with PRC2, maintains intra-CD interactions, but it also hinders the formation of H3K4me3-enriched local chromatin loops when acting independently of PRC2. Moreover, the loss of PRC1 or PRC2 activity differentially affects long-range chromatin interactions, and these 3D changes differentially affect gene expression. Our results suggest that H2AK121ub helps prevent the formation of transposable element/H3K27me1-rich long loops and serves as a docking point for H3K27me3 incorporation.
Related Topics
Concepts
PRC2
Chromatin
Biology
Polycomb-group proteins
H3K4me3
Histone
Histone H3
Arabidopsis
Genetics
EZH2
Cell biology
Epigenetics
Histone H2A
Epigenomics
Gene expression
Gene
Mutant
Repressor
DNA methylation
Promoter
Metadata
- Type
- article
- Language
- en
- Landing Page
- https://doi.org/10.1093/plcell/koad112
- OA Status
- green
- Cited By
- 37
- References
- 89
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W4366242882
All OpenAlex metadata
Raw OpenAlex JSON
- OpenAlex ID
-
https://openalex.org/W4366242882Canonical identifier for this work in OpenAlex
- DOI
-
https://doi.org/10.1093/plcell/koad112Digital Object Identifier
- Title
-
Binding by the Polycomb complex component BMI1 and H2A monoubiquitination shape local and long-range interactions in the Arabidopsis genomeWork title
- Type
-
articleOpenAlex work type
- Language
-
enPrimary language
- Publication year
-
2023Year of publication
- Publication date
-
2023-04-18Full publication date if available
- Authors
-
Xiaochang Yin, Francisco J. Romero–Campero, Minqi Yang, Fernando Baile, Yuxin Cao, Jiayue Shu, Lingxiao Luo, Dingyue Wang, Shang Sun, Peng Yan, Zhiyun Gong, Xiaorong Mo, Genji Qin, Myriam Calonje, Yue ZhouList of authors in order
- Landing page
-
https://doi.org/10.1093/plcell/koad112Publisher landing page
- Open access
-
YesWhether a free full text is available
- OA status
-
greenOpen access status per OpenAlex
- OA URL
-
https://pmc.ncbi.nlm.nih.gov/articles/PMC10291032/pdf/koad112.pdfDirect OA link when available
- Concepts
-
PRC2, Chromatin, Biology, Polycomb-group proteins, H3K4me3, Histone, Histone H3, Arabidopsis, Genetics, EZH2, Cell biology, Epigenetics, Histone H2A, Epigenomics, Gene expression, Gene, Mutant, Repressor, DNA methylation, PromoterTop concepts (fields/topics) attached by OpenAlex
- Cited by
-
37Total citation count in OpenAlex
- Citations by year (recent)
-
2025: 16, 2024: 15, 2023: 6Per-year citation counts (last 5 years)
- References (count)
-
89Number of works referenced by this work
- Related works (count)
-
10Other works algorithmically related by OpenAlex
Full payload
| id | https://openalex.org/W4366242882 |
|---|---|
| doi | https://doi.org/10.1093/plcell/koad112 |
| ids.doi | https://doi.org/10.1093/plcell/koad112 |
| ids.pmid | https://pubmed.ncbi.nlm.nih.gov/37070946 |
| ids.openalex | https://openalex.org/W4366242882 |
| fwci | 10.58321324 |
| mesh[0].qualifier_ui | Q000235 |
| mesh[0].descriptor_ui | D017360 |
| mesh[0].is_major_topic | True |
| mesh[0].qualifier_name | genetics |
| mesh[0].descriptor_name | Arabidopsis |
| mesh[1].qualifier_ui | Q000378 |
| mesh[1].descriptor_ui | D017360 |
| mesh[1].is_major_topic | True |
| mesh[1].qualifier_name | metabolism |
| mesh[1].descriptor_name | Arabidopsis |
| mesh[2].qualifier_ui | Q000235 |
| mesh[2].descriptor_ui | D006657 |
| mesh[2].is_major_topic | False |
| mesh[2].qualifier_name | genetics |
| mesh[2].descriptor_name | Histones |
| mesh[3].qualifier_ui | Q000378 |
| mesh[3].descriptor_ui | D006657 |
| mesh[3].is_major_topic | False |
| mesh[3].qualifier_name | metabolism |
| mesh[3].descriptor_name | Histones |
| mesh[4].qualifier_ui | Q000378 |
| mesh[4].descriptor_ui | D029681 |
| mesh[4].is_major_topic | True |
| mesh[4].qualifier_name | metabolism |
| mesh[4].descriptor_name | Arabidopsis Proteins |
| mesh[5].qualifier_ui | Q000378 |
| mesh[5].descriptor_ui | D008239 |
| mesh[5].is_major_topic | False |
| mesh[5].qualifier_name | metabolism |
| mesh[5].descriptor_name | Lysine |
| mesh[6].qualifier_ui | Q000235 |
| mesh[6].descriptor_ui | D063146 |
| mesh[6].is_major_topic | False |
| mesh[6].qualifier_name | genetics |
| mesh[6].descriptor_name | Polycomb-Group Proteins |
| mesh[7].qualifier_ui | Q000378 |
| mesh[7].descriptor_ui | D063146 |
| mesh[7].is_major_topic | False |
| mesh[7].qualifier_name | metabolism |
| mesh[7].descriptor_name | Polycomb-Group Proteins |
| mesh[8].qualifier_ui | Q000235 |
| mesh[8].descriptor_ui | D002843 |
| mesh[8].is_major_topic | False |
| mesh[8].qualifier_name | genetics |
| mesh[8].descriptor_name | Chromatin |
| mesh[9].qualifier_ui | Q000378 |
| mesh[9].descriptor_ui | D002843 |
| mesh[9].is_major_topic | False |
| mesh[9].qualifier_name | metabolism |
| mesh[9].descriptor_name | Chromatin |
| mesh[10].qualifier_ui | Q000235 |
| mesh[10].descriptor_ui | D063151 |
| mesh[10].is_major_topic | False |
| mesh[10].qualifier_name | genetics |
| mesh[10].descriptor_name | Polycomb Repressive Complex 2 |
| mesh[11].qualifier_ui | Q000378 |
| mesh[11].descriptor_ui | D063151 |
| mesh[11].is_major_topic | False |
| mesh[11].qualifier_name | metabolism |
| mesh[11].descriptor_name | Polycomb Repressive Complex 2 |
| mesh[12].qualifier_ui | Q000235 |
| mesh[12].descriptor_ui | D017360 |
| mesh[12].is_major_topic | True |
| mesh[12].qualifier_name | genetics |
| mesh[12].descriptor_name | Arabidopsis |
| mesh[13].qualifier_ui | Q000378 |
| mesh[13].descriptor_ui | D017360 |
| mesh[13].is_major_topic | True |
| mesh[13].qualifier_name | metabolism |
| mesh[13].descriptor_name | Arabidopsis |
| mesh[14].qualifier_ui | Q000235 |
| mesh[14].descriptor_ui | D006657 |
| mesh[14].is_major_topic | False |
| mesh[14].qualifier_name | genetics |
| mesh[14].descriptor_name | Histones |
| mesh[15].qualifier_ui | Q000378 |
| mesh[15].descriptor_ui | D006657 |
| mesh[15].is_major_topic | False |
| mesh[15].qualifier_name | metabolism |
| mesh[15].descriptor_name | Histones |
| mesh[16].qualifier_ui | Q000378 |
| mesh[16].descriptor_ui | D029681 |
| mesh[16].is_major_topic | True |
| mesh[16].qualifier_name | metabolism |
| mesh[16].descriptor_name | Arabidopsis Proteins |
| mesh[17].qualifier_ui | Q000378 |
| mesh[17].descriptor_ui | D008239 |
| mesh[17].is_major_topic | False |
| mesh[17].qualifier_name | metabolism |
| mesh[17].descriptor_name | Lysine |
| mesh[18].qualifier_ui | Q000235 |
| mesh[18].descriptor_ui | D063146 |
| mesh[18].is_major_topic | False |
| mesh[18].qualifier_name | genetics |
| mesh[18].descriptor_name | Polycomb-Group Proteins |
| mesh[19].qualifier_ui | Q000378 |
| mesh[19].descriptor_ui | D063146 |
| mesh[19].is_major_topic | False |
| mesh[19].qualifier_name | metabolism |
| mesh[19].descriptor_name | Polycomb-Group Proteins |
| mesh[20].qualifier_ui | Q000235 |
| mesh[20].descriptor_ui | D002843 |
| mesh[20].is_major_topic | False |
| mesh[20].qualifier_name | genetics |
| mesh[20].descriptor_name | Chromatin |
| mesh[21].qualifier_ui | Q000378 |
| mesh[21].descriptor_ui | D002843 |
| mesh[21].is_major_topic | False |
| mesh[21].qualifier_name | metabolism |
| mesh[21].descriptor_name | Chromatin |
| mesh[22].qualifier_ui | Q000235 |
| mesh[22].descriptor_ui | D063151 |
| mesh[22].is_major_topic | False |
| mesh[22].qualifier_name | genetics |
| mesh[22].descriptor_name | Polycomb Repressive Complex 2 |
| mesh[23].qualifier_ui | Q000378 |
| mesh[23].descriptor_ui | D063151 |
| mesh[23].is_major_topic | False |
| mesh[23].qualifier_name | metabolism |
| mesh[23].descriptor_name | Polycomb Repressive Complex 2 |
| mesh[24].qualifier_ui | Q000235 |
| mesh[24].descriptor_ui | D017360 |
| mesh[24].is_major_topic | True |
| mesh[24].qualifier_name | genetics |
| mesh[24].descriptor_name | Arabidopsis |
| mesh[25].qualifier_ui | Q000378 |
| mesh[25].descriptor_ui | D017360 |
| mesh[25].is_major_topic | True |
| mesh[25].qualifier_name | metabolism |
| mesh[25].descriptor_name | Arabidopsis |
| mesh[26].qualifier_ui | Q000235 |
| mesh[26].descriptor_ui | D006657 |
| mesh[26].is_major_topic | False |
| mesh[26].qualifier_name | genetics |
| mesh[26].descriptor_name | Histones |
| mesh[27].qualifier_ui | Q000378 |
| mesh[27].descriptor_ui | D006657 |
| mesh[27].is_major_topic | False |
| mesh[27].qualifier_name | metabolism |
| mesh[27].descriptor_name | Histones |
| mesh[28].qualifier_ui | Q000378 |
| mesh[28].descriptor_ui | D029681 |
| mesh[28].is_major_topic | True |
| mesh[28].qualifier_name | metabolism |
| mesh[28].descriptor_name | Arabidopsis Proteins |
| mesh[29].qualifier_ui | Q000378 |
| mesh[29].descriptor_ui | D008239 |
| mesh[29].is_major_topic | False |
| mesh[29].qualifier_name | metabolism |
| mesh[29].descriptor_name | Lysine |
| mesh[30].qualifier_ui | Q000235 |
| mesh[30].descriptor_ui | D063146 |
| mesh[30].is_major_topic | False |
| mesh[30].qualifier_name | genetics |
| mesh[30].descriptor_name | Polycomb-Group Proteins |
| mesh[31].qualifier_ui | Q000378 |
| mesh[31].descriptor_ui | D063146 |
| mesh[31].is_major_topic | False |
| mesh[31].qualifier_name | metabolism |
| mesh[31].descriptor_name | Polycomb-Group Proteins |
| mesh[32].qualifier_ui | Q000235 |
| mesh[32].descriptor_ui | D002843 |
| mesh[32].is_major_topic | False |
| mesh[32].qualifier_name | genetics |
| mesh[32].descriptor_name | Chromatin |
| mesh[33].qualifier_ui | Q000378 |
| mesh[33].descriptor_ui | D002843 |
| mesh[33].is_major_topic | False |
| mesh[33].qualifier_name | metabolism |
| mesh[33].descriptor_name | Chromatin |
| mesh[34].qualifier_ui | Q000235 |
| mesh[34].descriptor_ui | D063151 |
| mesh[34].is_major_topic | False |
| mesh[34].qualifier_name | genetics |
| mesh[34].descriptor_name | Polycomb Repressive Complex 2 |
| mesh[35].qualifier_ui | Q000378 |
| mesh[35].descriptor_ui | D063151 |
| mesh[35].is_major_topic | False |
| mesh[35].qualifier_name | metabolism |
| mesh[35].descriptor_name | Polycomb Repressive Complex 2 |
| type | article |
| title | Binding by the Polycomb complex component BMI1 and H2A monoubiquitination shape local and long-range interactions in the Arabidopsis genome |
| awards[0].id | https://openalex.org/G7682351824 |
| awards[0].funder_id | https://openalex.org/F4320321001 |
| awards[0].display_name | |
| awards[0].funder_award_id | PID2019-106664GB-I00 |
| awards[0].funder_display_name | National Natural Science Foundation of China |
| awards[1].id | https://openalex.org/G4404043211 |
| awards[1].funder_id | https://openalex.org/F4320322930 |
| awards[1].display_name | |
| awards[1].funder_award_id | 2021T140019 |
| awards[1].funder_display_name | Ministerio de Ciencia e Innovación |
| awards[2].id | https://openalex.org/G5525156095 |
| awards[2].funder_id | https://openalex.org/F4320321001 |
| awards[2].display_name | |
| awards[2].funder_award_id | BIO2017-84066-R |
| awards[2].funder_display_name | National Natural Science Foundation of China |
| biblio.issue | 7 |
| biblio.volume | 35 |
| biblio.last_page | 2503 |
| biblio.first_page | 2484 |
| topics[0].id | https://openalex.org/T10222 |
| topics[0].field.id | https://openalex.org/fields/13 |
| topics[0].field.display_name | Biochemistry, Genetics and Molecular Biology |
| topics[0].score | 0.9998999834060669 |
| topics[0].domain.id | https://openalex.org/domains/1 |
| topics[0].domain.display_name | Life Sciences |
| topics[0].subfield.id | https://openalex.org/subfields/1312 |
| topics[0].subfield.display_name | Molecular Biology |
| topics[0].display_name | Genomics and Chromatin Dynamics |
| topics[1].id | https://openalex.org/T10434 |
| topics[1].field.id | https://openalex.org/fields/11 |
| topics[1].field.display_name | Agricultural and Biological Sciences |
| topics[1].score | 0.9994999766349792 |
| topics[1].domain.id | https://openalex.org/domains/1 |
| topics[1].domain.display_name | Life Sciences |
| topics[1].subfield.id | https://openalex.org/subfields/1110 |
| topics[1].subfield.display_name | Plant Science |
| topics[1].display_name | Chromosomal and Genetic Variations |
| topics[2].id | https://openalex.org/T10184 |
| topics[2].field.id | https://openalex.org/fields/11 |
| topics[2].field.display_name | Agricultural and Biological Sciences |
| topics[2].score | 0.9994999766349792 |
| topics[2].domain.id | https://openalex.org/domains/1 |
| topics[2].domain.display_name | Life Sciences |
| topics[2].subfield.id | https://openalex.org/subfields/1110 |
| topics[2].subfield.display_name | Plant Science |
| topics[2].display_name | Plant Molecular Biology Research |
| funders[0].id | https://openalex.org/F4320321001 |
| funders[0].ror | https://ror.org/01h0zpd94 |
| funders[0].display_name | National Natural Science Foundation of China |
| funders[1].id | https://openalex.org/F4320321543 |
| funders[1].ror | https://ror.org/0426zh255 |
| funders[1].display_name | China Postdoctoral Science Foundation |
| funders[2].id | https://openalex.org/F4320322930 |
| funders[2].ror | https://ror.org/034900433 |
| funders[2].display_name | Ministerio de Ciencia e Innovación |
| funders[3].id | https://openalex.org/F4320324787 |
| funders[3].ror | https://ror.org/02v51f717 |
| funders[3].display_name | Peking University |
| funders[4].id | https://openalex.org/F4320326901 |
| funders[4].ror | |
| funders[4].display_name | State Key Laboratory of Protein and Plant Gene Research |
| is_xpac | False |
| apc_list.value | 4371 |
| apc_list.currency | USD |
| apc_list.value_usd | 4371 |
| apc_paid | |
| concepts[0].id | https://openalex.org/C2776915012 |
| concepts[0].level | 5 |
| concepts[0].score | 0.9219465255737305 |
| concepts[0].wikidata | https://www.wikidata.org/wiki/Q17125871 |
| concepts[0].display_name | PRC2 |
| concepts[1].id | https://openalex.org/C83640560 |
| concepts[1].level | 3 |
| concepts[1].score | 0.8398243188858032 |
| concepts[1].wikidata | https://www.wikidata.org/wiki/Q180951 |
| concepts[1].display_name | Chromatin |
| concepts[2].id | https://openalex.org/C86803240 |
| concepts[2].level | 0 |
| concepts[2].score | 0.8251506090164185 |
| concepts[2].wikidata | https://www.wikidata.org/wiki/Q420 |
| concepts[2].display_name | Biology |
| concepts[3].id | https://openalex.org/C2777116130 |
| concepts[3].level | 5 |
| concepts[3].score | 0.7754544019699097 |
| concepts[3].wikidata | https://www.wikidata.org/wiki/Q4082046 |
| concepts[3].display_name | Polycomb-group proteins |
| concepts[4].id | https://openalex.org/C2780914512 |
| concepts[4].level | 5 |
| concepts[4].score | 0.6147669553756714 |
| concepts[4].wikidata | https://www.wikidata.org/wiki/Q25323943 |
| concepts[4].display_name | H3K4me3 |
| concepts[5].id | https://openalex.org/C64927066 |
| concepts[5].level | 3 |
| concepts[5].score | 0.5789427161216736 |
| concepts[5].wikidata | https://www.wikidata.org/wiki/Q36293 |
| concepts[5].display_name | Histone |
| concepts[6].id | https://openalex.org/C2776745794 |
| concepts[6].level | 4 |
| concepts[6].score | 0.5581011772155762 |
| concepts[6].wikidata | https://www.wikidata.org/wiki/Q24777451 |
| concepts[6].display_name | Histone H3 |
| concepts[7].id | https://openalex.org/C2779491563 |
| concepts[7].level | 4 |
| concepts[7].score | 0.5171024799346924 |
| concepts[7].wikidata | https://www.wikidata.org/wiki/Q157892 |
| concepts[7].display_name | Arabidopsis |
| concepts[8].id | https://openalex.org/C54355233 |
| concepts[8].level | 1 |
| concepts[8].score | 0.4872526228427887 |
| concepts[8].wikidata | https://www.wikidata.org/wiki/Q7162 |
| concepts[8].display_name | Genetics |
| concepts[9].id | https://openalex.org/C50171091 |
| concepts[9].level | 4 |
| concepts[9].score | 0.46684038639068604 |
| concepts[9].wikidata | https://www.wikidata.org/wiki/Q17917770 |
| concepts[9].display_name | EZH2 |
| concepts[10].id | https://openalex.org/C95444343 |
| concepts[10].level | 1 |
| concepts[10].score | 0.45451614260673523 |
| concepts[10].wikidata | https://www.wikidata.org/wiki/Q7141 |
| concepts[10].display_name | Cell biology |
| concepts[11].id | https://openalex.org/C41091548 |
| concepts[11].level | 3 |
| concepts[11].score | 0.45103463530540466 |
| concepts[11].wikidata | https://www.wikidata.org/wiki/Q26939 |
| concepts[11].display_name | Epigenetics |
| concepts[12].id | https://openalex.org/C56428682 |
| concepts[12].level | 4 |
| concepts[12].score | 0.45101621747016907 |
| concepts[12].wikidata | https://www.wikidata.org/wiki/Q24785535 |
| concepts[12].display_name | Histone H2A |
| concepts[13].id | https://openalex.org/C121912465 |
| concepts[13].level | 5 |
| concepts[13].score | 0.42439520359039307 |
| concepts[13].wikidata | https://www.wikidata.org/wiki/Q3589153 |
| concepts[13].display_name | Epigenomics |
| concepts[14].id | https://openalex.org/C150194340 |
| concepts[14].level | 3 |
| concepts[14].score | 0.23835813999176025 |
| concepts[14].wikidata | https://www.wikidata.org/wiki/Q26972 |
| concepts[14].display_name | Gene expression |
| concepts[15].id | https://openalex.org/C104317684 |
| concepts[15].level | 2 |
| concepts[15].score | 0.2356296181678772 |
| concepts[15].wikidata | https://www.wikidata.org/wiki/Q7187 |
| concepts[15].display_name | Gene |
| concepts[16].id | https://openalex.org/C143065580 |
| concepts[16].level | 3 |
| concepts[16].score | 0.13174453377723694 |
| concepts[16].wikidata | https://www.wikidata.org/wiki/Q3285695 |
| concepts[16].display_name | Mutant |
| concepts[17].id | https://openalex.org/C158448853 |
| concepts[17].level | 4 |
| concepts[17].score | 0.13076934218406677 |
| concepts[17].wikidata | https://www.wikidata.org/wiki/Q425218 |
| concepts[17].display_name | Repressor |
| concepts[18].id | https://openalex.org/C190727270 |
| concepts[18].level | 4 |
| concepts[18].score | 0.11529317498207092 |
| concepts[18].wikidata | https://www.wikidata.org/wiki/Q874745 |
| concepts[18].display_name | DNA methylation |
| concepts[19].id | https://openalex.org/C101762097 |
| concepts[19].level | 4 |
| concepts[19].score | 0.10006678104400635 |
| concepts[19].wikidata | https://www.wikidata.org/wiki/Q224093 |
| concepts[19].display_name | Promoter |
| keywords[0].id | https://openalex.org/keywords/prc2 |
| keywords[0].score | 0.9219465255737305 |
| keywords[0].display_name | PRC2 |
| keywords[1].id | https://openalex.org/keywords/chromatin |
| keywords[1].score | 0.8398243188858032 |
| keywords[1].display_name | Chromatin |
| keywords[2].id | https://openalex.org/keywords/biology |
| keywords[2].score | 0.8251506090164185 |
| keywords[2].display_name | Biology |
| keywords[3].id | https://openalex.org/keywords/polycomb-group-proteins |
| keywords[3].score | 0.7754544019699097 |
| keywords[3].display_name | Polycomb-group proteins |
| keywords[4].id | https://openalex.org/keywords/h3k4me3 |
| keywords[4].score | 0.6147669553756714 |
| keywords[4].display_name | H3K4me3 |
| keywords[5].id | https://openalex.org/keywords/histone |
| keywords[5].score | 0.5789427161216736 |
| keywords[5].display_name | Histone |
| keywords[6].id | https://openalex.org/keywords/histone-h3 |
| keywords[6].score | 0.5581011772155762 |
| keywords[6].display_name | Histone H3 |
| keywords[7].id | https://openalex.org/keywords/arabidopsis |
| keywords[7].score | 0.5171024799346924 |
| keywords[7].display_name | Arabidopsis |
| keywords[8].id | https://openalex.org/keywords/genetics |
| keywords[8].score | 0.4872526228427887 |
| keywords[8].display_name | Genetics |
| keywords[9].id | https://openalex.org/keywords/ezh2 |
| keywords[9].score | 0.46684038639068604 |
| keywords[9].display_name | EZH2 |
| keywords[10].id | https://openalex.org/keywords/cell-biology |
| keywords[10].score | 0.45451614260673523 |
| keywords[10].display_name | Cell biology |
| keywords[11].id | https://openalex.org/keywords/epigenetics |
| keywords[11].score | 0.45103463530540466 |
| keywords[11].display_name | Epigenetics |
| keywords[12].id | https://openalex.org/keywords/histone-h2a |
| keywords[12].score | 0.45101621747016907 |
| keywords[12].display_name | Histone H2A |
| keywords[13].id | https://openalex.org/keywords/epigenomics |
| keywords[13].score | 0.42439520359039307 |
| keywords[13].display_name | Epigenomics |
| keywords[14].id | https://openalex.org/keywords/gene-expression |
| keywords[14].score | 0.23835813999176025 |
| keywords[14].display_name | Gene expression |
| keywords[15].id | https://openalex.org/keywords/gene |
| keywords[15].score | 0.2356296181678772 |
| keywords[15].display_name | Gene |
| keywords[16].id | https://openalex.org/keywords/mutant |
| keywords[16].score | 0.13174453377723694 |
| keywords[16].display_name | Mutant |
| keywords[17].id | https://openalex.org/keywords/repressor |
| keywords[17].score | 0.13076934218406677 |
| keywords[17].display_name | Repressor |
| keywords[18].id | https://openalex.org/keywords/dna-methylation |
| keywords[18].score | 0.11529317498207092 |
| keywords[18].display_name | DNA methylation |
| keywords[19].id | https://openalex.org/keywords/promoter |
| keywords[19].score | 0.10006678104400635 |
| keywords[19].display_name | Promoter |
| language | en |
| locations[0].id | doi:10.1093/plcell/koad112 |
| locations[0].is_oa | False |
| locations[0].source.id | https://openalex.org/S48849333 |
| locations[0].source.issn | 1040-4651, 1532-298X |
| locations[0].source.type | journal |
| locations[0].source.is_oa | False |
| locations[0].source.issn_l | 1040-4651 |
| locations[0].source.is_core | True |
| locations[0].source.is_in_doaj | False |
| locations[0].source.display_name | The Plant Cell |
| locations[0].source.host_organization | https://openalex.org/P4310311648 |
| locations[0].source.host_organization_name | Oxford University Press |
| locations[0].source.host_organization_lineage | https://openalex.org/P4310311648, https://openalex.org/P4310311647 |
| locations[0].source.host_organization_lineage_names | Oxford University Press, University of Oxford |
| locations[0].license | |
| locations[0].pdf_url | |
| locations[0].version | publishedVersion |
| locations[0].raw_type | journal-article |
| locations[0].license_id | |
| locations[0].is_accepted | True |
| locations[0].is_published | True |
| locations[0].raw_source_name | The Plant Cell |
| locations[0].landing_page_url | https://doi.org/10.1093/plcell/koad112 |
| locations[1].id | pmid:37070946 |
| locations[1].is_oa | False |
| locations[1].source.id | https://openalex.org/S4306525036 |
| locations[1].source.issn | |
| locations[1].source.type | repository |
| locations[1].source.is_oa | False |
| locations[1].source.issn_l | |
| locations[1].source.is_core | False |
| locations[1].source.is_in_doaj | False |
| locations[1].source.display_name | PubMed |
| locations[1].source.host_organization | https://openalex.org/I1299303238 |
| locations[1].source.host_organization_name | National Institutes of Health |
| locations[1].source.host_organization_lineage | https://openalex.org/I1299303238 |
| locations[1].license | |
| locations[1].pdf_url | |
| locations[1].version | publishedVersion |
| locations[1].raw_type | |
| locations[1].license_id | |
| locations[1].is_accepted | True |
| locations[1].is_published | True |
| locations[1].raw_source_name | The Plant cell |
| locations[1].landing_page_url | https://pubmed.ncbi.nlm.nih.gov/37070946 |
| locations[2].id | pmh:oai:pubmedcentral.nih.gov:10291032 |
| locations[2].is_oa | True |
| locations[2].source.id | https://openalex.org/S2764455111 |
| locations[2].source.issn | |
| locations[2].source.type | repository |
| locations[2].source.is_oa | False |
| locations[2].source.issn_l | |
| locations[2].source.is_core | False |
| locations[2].source.is_in_doaj | False |
| locations[2].source.display_name | PubMed Central |
| locations[2].source.host_organization | https://openalex.org/I1299303238 |
| locations[2].source.host_organization_name | National Institutes of Health |
| locations[2].source.host_organization_lineage | https://openalex.org/I1299303238 |
| locations[2].license | |
| locations[2].pdf_url | https://pmc.ncbi.nlm.nih.gov/articles/PMC10291032/pdf/koad112.pdf |
| locations[2].version | submittedVersion |
| locations[2].raw_type | Text |
| locations[2].license_id | |
| locations[2].is_accepted | False |
| locations[2].is_published | False |
| locations[2].raw_source_name | Plant Cell |
| locations[2].landing_page_url | https://www.ncbi.nlm.nih.gov/pmc/articles/10291032 |
| locations[3].id | pmh:oai:digital.csic.es:10261/355310 |
| locations[3].is_oa | True |
| locations[3].source.id | https://openalex.org/S4306400616 |
| locations[3].source.issn | |
| locations[3].source.type | repository |
| locations[3].source.is_oa | False |
| locations[3].source.issn_l | |
| locations[3].source.is_core | False |
| locations[3].source.is_in_doaj | False |
| locations[3].source.display_name | DIGITAL.CSIC (Spanish National Research Council (CSIC)) |
| locations[3].source.host_organization | https://openalex.org/I134820265 |
| locations[3].source.host_organization_name | Consejo Superior de Investigaciones Científicas |
| locations[3].source.host_organization_lineage | https://openalex.org/I134820265 |
| locations[3].license | other-oa |
| locations[3].pdf_url | |
| locations[3].version | submittedVersion |
| locations[3].raw_type | http://purl.org/coar/resource_type/c_6501 |
| locations[3].license_id | https://openalex.org/licenses/other-oa |
| locations[3].is_accepted | False |
| locations[3].is_published | False |
| locations[3].raw_source_name | |
| locations[3].landing_page_url | http://hdl.handle.net/10261/355310 |
| indexed_in | crossref, pubmed |
| authorships[0].author.id | https://openalex.org/A5054396355 |
| authorships[0].author.orcid | |
| authorships[0].author.display_name | Xiaochang Yin |
| authorships[0].countries | CN |
| authorships[0].affiliations[0].institution_ids | https://openalex.org/I20231570, https://openalex.org/I4210160507 |
| authorships[0].affiliations[0].raw_affiliation_string | State Key Laboratory of Protein and Plant Gene Research, School of Advanced Agricultural Sciences, Peking-Tsinghua Center for Life Sciences, Peking University , Beijing 100871 , China |
| authorships[0].institutions[0].id | https://openalex.org/I4210160507 |
| authorships[0].institutions[0].ror | https://ror.org/05kje8j93 |
| authorships[0].institutions[0].type | education |
| authorships[0].institutions[0].lineage | https://openalex.org/I20231570, https://openalex.org/I4210160507, https://openalex.org/I99065089 |
| authorships[0].institutions[0].country_code | CN |
| authorships[0].institutions[0].display_name | Center for Life Sciences |
| authorships[0].institutions[1].id | https://openalex.org/I20231570 |
| authorships[0].institutions[1].ror | https://ror.org/02v51f717 |
| authorships[0].institutions[1].type | education |
| authorships[0].institutions[1].lineage | https://openalex.org/I20231570 |
| authorships[0].institutions[1].country_code | CN |
| authorships[0].institutions[1].display_name | Peking University |
| authorships[0].author_position | first |
| authorships[0].raw_author_name | Xiaochang Yin |
| authorships[0].is_corresponding | False |
| authorships[0].raw_affiliation_strings | State Key Laboratory of Protein and Plant Gene Research, School of Advanced Agricultural Sciences, Peking-Tsinghua Center for Life Sciences, Peking University , Beijing 100871 , China |
| authorships[1].author.id | https://openalex.org/A5021627857 |
| authorships[1].author.orcid | https://orcid.org/0000-0001-9834-030X |
| authorships[1].author.display_name | Francisco J. Romero–Campero |
| authorships[1].countries | ES |
| authorships[1].affiliations[0].institution_ids | https://openalex.org/I79238269 |
| authorships[1].affiliations[0].raw_affiliation_string | Department of Computer Science and Artificial Intelligence, University of Sevilla , Avenida Reina Mercedes s/n, Seville 41012 , Spain |
| authorships[1].affiliations[1].institution_ids | https://openalex.org/I79238269 |
| authorships[1].affiliations[1].raw_affiliation_string | Department of Computer Science and Artificial Intelligence, University of Sevilla, Avenida Reina Mercedes s/n, Seville 41012, Spain |
| authorships[1].institutions[0].id | https://openalex.org/I79238269 |
| authorships[1].institutions[0].ror | https://ror.org/03yxnpp24 |
| authorships[1].institutions[0].type | education |
| authorships[1].institutions[0].lineage | https://openalex.org/I79238269 |
| authorships[1].institutions[0].country_code | ES |
| authorships[1].institutions[0].display_name | Universidad de Sevilla |
| authorships[1].author_position | middle |
| authorships[1].raw_author_name | Francisco J Romero-Campero |
| authorships[1].is_corresponding | False |
| authorships[1].raw_affiliation_strings | Department of Computer Science and Artificial Intelligence, University of Sevilla , Avenida Reina Mercedes s/n, Seville 41012 , Spain, Department of Computer Science and Artificial Intelligence, University of Sevilla, Avenida Reina Mercedes s/n, Seville 41012, Spain |
| authorships[2].author.id | https://openalex.org/A5046180274 |
| authorships[2].author.orcid | https://orcid.org/0000-0003-3467-3759 |
| authorships[2].author.display_name | Minqi Yang |
| authorships[2].countries | CN |
| authorships[2].affiliations[0].institution_ids | https://openalex.org/I20231570, https://openalex.org/I4210160507 |
| authorships[2].affiliations[0].raw_affiliation_string | State Key Laboratory of Protein and Plant Gene Research, School of Advanced Agricultural Sciences, Peking-Tsinghua Center for Life Sciences, Peking University , Beijing 100871 , China |
| authorships[2].institutions[0].id | https://openalex.org/I4210160507 |
| authorships[2].institutions[0].ror | https://ror.org/05kje8j93 |
| authorships[2].institutions[0].type | education |
| authorships[2].institutions[0].lineage | https://openalex.org/I20231570, https://openalex.org/I4210160507, https://openalex.org/I99065089 |
| authorships[2].institutions[0].country_code | CN |
| authorships[2].institutions[0].display_name | Center for Life Sciences |
| authorships[2].institutions[1].id | https://openalex.org/I20231570 |
| authorships[2].institutions[1].ror | https://ror.org/02v51f717 |
| authorships[2].institutions[1].type | education |
| authorships[2].institutions[1].lineage | https://openalex.org/I20231570 |
| authorships[2].institutions[1].country_code | CN |
| authorships[2].institutions[1].display_name | Peking University |
| authorships[2].author_position | middle |
| authorships[2].raw_author_name | Minqi Yang |
| authorships[2].is_corresponding | False |
| authorships[2].raw_affiliation_strings | State Key Laboratory of Protein and Plant Gene Research, School of Advanced Agricultural Sciences, Peking-Tsinghua Center for Life Sciences, Peking University , Beijing 100871 , China |
| authorships[3].author.id | https://openalex.org/A5086932430 |
| authorships[3].author.orcid | https://orcid.org/0000-0002-3923-0984 |
| authorships[3].author.display_name | Fernando Baile |
| authorships[3].countries | ES |
| authorships[3].affiliations[0].institution_ids | https://openalex.org/I4210091303 |
| authorships[3].affiliations[0].raw_affiliation_string | Institute of Plant Biochemistry and Photosynthesis (IBVF-CSIC) , Avenida Américo Vespucio 49, 41092 Seville , Spain |
| authorships[3].institutions[0].id | https://openalex.org/I4210091303 |
| authorships[3].institutions[0].ror | https://ror.org/00hsc2364 |
| authorships[3].institutions[0].type | facility |
| authorships[3].institutions[0].lineage | https://openalex.org/I134820265, https://openalex.org/I4210091303, https://openalex.org/I79238269 |
| authorships[3].institutions[0].country_code | ES |
| authorships[3].institutions[0].display_name | Instituto de Bioquímica Vegetal y Fotosíntesis |
| authorships[3].author_position | middle |
| authorships[3].raw_author_name | Fernando Baile |
| authorships[3].is_corresponding | False |
| authorships[3].raw_affiliation_strings | Institute of Plant Biochemistry and Photosynthesis (IBVF-CSIC) , Avenida Américo Vespucio 49, 41092 Seville , Spain |
| authorships[4].author.id | https://openalex.org/A5026731539 |
| authorships[4].author.orcid | https://orcid.org/0000-0002-8897-7259 |
| authorships[4].author.display_name | Yuxin Cao |
| authorships[4].countries | CN |
| authorships[4].affiliations[0].institution_ids | https://openalex.org/I20231570, https://openalex.org/I4210160507 |
| authorships[4].affiliations[0].raw_affiliation_string | State Key Laboratory of Protein and Plant Gene Research, School of Advanced Agricultural Sciences, Peking-Tsinghua Center for Life Sciences, Peking University , Beijing 100871 , China |
| authorships[4].institutions[0].id | https://openalex.org/I4210160507 |
| authorships[4].institutions[0].ror | https://ror.org/05kje8j93 |
| authorships[4].institutions[0].type | education |
| authorships[4].institutions[0].lineage | https://openalex.org/I20231570, https://openalex.org/I4210160507, https://openalex.org/I99065089 |
| authorships[4].institutions[0].country_code | CN |
| authorships[4].institutions[0].display_name | Center for Life Sciences |
| authorships[4].institutions[1].id | https://openalex.org/I20231570 |
| authorships[4].institutions[1].ror | https://ror.org/02v51f717 |
| authorships[4].institutions[1].type | education |
| authorships[4].institutions[1].lineage | https://openalex.org/I20231570 |
| authorships[4].institutions[1].country_code | CN |
| authorships[4].institutions[1].display_name | Peking University |
| authorships[4].author_position | middle |
| authorships[4].raw_author_name | Yuxin Cao |
| authorships[4].is_corresponding | False |
| authorships[4].raw_affiliation_strings | State Key Laboratory of Protein and Plant Gene Research, School of Advanced Agricultural Sciences, Peking-Tsinghua Center for Life Sciences, Peking University , Beijing 100871 , China |
| authorships[5].author.id | https://openalex.org/A5039093957 |
| authorships[5].author.orcid | https://orcid.org/0000-0003-2939-0076 |
| authorships[5].author.display_name | Jiayue Shu |
| authorships[5].countries | CN |
| authorships[5].affiliations[0].institution_ids | https://openalex.org/I20231570, https://openalex.org/I4210160507 |
| authorships[5].affiliations[0].raw_affiliation_string | State Key Laboratory of Protein and Plant Gene Research, School of Advanced Agricultural Sciences, Peking-Tsinghua Center for Life Sciences, Peking University , Beijing 100871 , China |
| authorships[5].affiliations[1].institution_ids | https://openalex.org/I20231570 |
| authorships[5].affiliations[1].raw_affiliation_string | Academy for Advanced Interdisciplinary Studies, Peking University , Beijing 100871 , China |
| authorships[5].institutions[0].id | https://openalex.org/I4210160507 |
| authorships[5].institutions[0].ror | https://ror.org/05kje8j93 |
| authorships[5].institutions[0].type | education |
| authorships[5].institutions[0].lineage | https://openalex.org/I20231570, https://openalex.org/I4210160507, https://openalex.org/I99065089 |
| authorships[5].institutions[0].country_code | CN |
| authorships[5].institutions[0].display_name | Center for Life Sciences |
| authorships[5].institutions[1].id | https://openalex.org/I20231570 |
| authorships[5].institutions[1].ror | https://ror.org/02v51f717 |
| authorships[5].institutions[1].type | education |
| authorships[5].institutions[1].lineage | https://openalex.org/I20231570 |
| authorships[5].institutions[1].country_code | CN |
| authorships[5].institutions[1].display_name | Peking University |
| authorships[5].author_position | middle |
| authorships[5].raw_author_name | Jiayue Shu |
| authorships[5].is_corresponding | False |
| authorships[5].raw_affiliation_strings | Academy for Advanced Interdisciplinary Studies, Peking University , Beijing 100871 , China, State Key Laboratory of Protein and Plant Gene Research, School of Advanced Agricultural Sciences, Peking-Tsinghua Center for Life Sciences, Peking University , Beijing 100871 , China |
| authorships[6].author.id | https://openalex.org/A5049986890 |
| authorships[6].author.orcid | https://orcid.org/0000-0002-2220-0500 |
| authorships[6].author.display_name | Lingxiao Luo |
| authorships[6].countries | CN |
| authorships[6].affiliations[0].institution_ids | https://openalex.org/I20231570, https://openalex.org/I4210160507 |
| authorships[6].affiliations[0].raw_affiliation_string | State Key Laboratory of Protein and Plant Gene Research, School of Advanced Agricultural Sciences, Peking-Tsinghua Center for Life Sciences, Peking University , Beijing 100871 , China |
| authorships[6].institutions[0].id | https://openalex.org/I4210160507 |
| authorships[6].institutions[0].ror | https://ror.org/05kje8j93 |
| authorships[6].institutions[0].type | education |
| authorships[6].institutions[0].lineage | https://openalex.org/I20231570, https://openalex.org/I4210160507, https://openalex.org/I99065089 |
| authorships[6].institutions[0].country_code | CN |
| authorships[6].institutions[0].display_name | Center for Life Sciences |
| authorships[6].institutions[1].id | https://openalex.org/I20231570 |
| authorships[6].institutions[1].ror | https://ror.org/02v51f717 |
| authorships[6].institutions[1].type | education |
| authorships[6].institutions[1].lineage | https://openalex.org/I20231570 |
| authorships[6].institutions[1].country_code | CN |
| authorships[6].institutions[1].display_name | Peking University |
| authorships[6].author_position | middle |
| authorships[6].raw_author_name | Lingxiao Luo |
| authorships[6].is_corresponding | False |
| authorships[6].raw_affiliation_strings | State Key Laboratory of Protein and Plant Gene Research, School of Advanced Agricultural Sciences, Peking-Tsinghua Center for Life Sciences, Peking University , Beijing 100871 , China |
| authorships[7].author.id | https://openalex.org/A5015791000 |
| authorships[7].author.orcid | https://orcid.org/0000-0002-1027-7455 |
| authorships[7].author.display_name | Dingyue Wang |
| authorships[7].countries | CN |
| authorships[7].affiliations[0].institution_ids | https://openalex.org/I20231570, https://openalex.org/I4210160507 |
| authorships[7].affiliations[0].raw_affiliation_string | State Key Laboratory of Protein and Plant Gene Research, School of Advanced Agricultural Sciences, Peking-Tsinghua Center for Life Sciences, Peking University , Beijing 100871 , China |
| authorships[7].affiliations[1].institution_ids | https://openalex.org/I20231570 |
| authorships[7].affiliations[1].raw_affiliation_string | Academy for Advanced Interdisciplinary Studies, Peking University , Beijing 100871 , China |
| authorships[7].institutions[0].id | https://openalex.org/I4210160507 |
| authorships[7].institutions[0].ror | https://ror.org/05kje8j93 |
| authorships[7].institutions[0].type | education |
| authorships[7].institutions[0].lineage | https://openalex.org/I20231570, https://openalex.org/I4210160507, https://openalex.org/I99065089 |
| authorships[7].institutions[0].country_code | CN |
| authorships[7].institutions[0].display_name | Center for Life Sciences |
| authorships[7].institutions[1].id | https://openalex.org/I20231570 |
| authorships[7].institutions[1].ror | https://ror.org/02v51f717 |
| authorships[7].institutions[1].type | education |
| authorships[7].institutions[1].lineage | https://openalex.org/I20231570 |
| authorships[7].institutions[1].country_code | CN |
| authorships[7].institutions[1].display_name | Peking University |
| authorships[7].author_position | middle |
| authorships[7].raw_author_name | Dingyue Wang |
| authorships[7].is_corresponding | False |
| authorships[7].raw_affiliation_strings | Academy for Advanced Interdisciplinary Studies, Peking University , Beijing 100871 , China, State Key Laboratory of Protein and Plant Gene Research, School of Advanced Agricultural Sciences, Peking-Tsinghua Center for Life Sciences, Peking University , Beijing 100871 , China |
| authorships[8].author.id | https://openalex.org/A5013178448 |
| authorships[8].author.orcid | https://orcid.org/0009-0007-8504-0253 |
| authorships[8].author.display_name | Shang Sun |
| authorships[8].countries | CN |
| authorships[8].affiliations[0].institution_ids | https://openalex.org/I78978612 |
| authorships[8].affiliations[0].raw_affiliation_string | Key Laboratory of Plant Functional Genomics of the Ministry of Education/Jiangsu Key Laboratory of Crop Genomics and Molecular Breeding, Agricultural College of Yangzhou University , Yangzhou 225009 , China |
| authorships[8].institutions[0].id | https://openalex.org/I78978612 |
| authorships[8].institutions[0].ror | https://ror.org/03tqb8s11 |
| authorships[8].institutions[0].type | education |
| authorships[8].institutions[0].lineage | https://openalex.org/I78978612 |
| authorships[8].institutions[0].country_code | CN |
| authorships[8].institutions[0].display_name | Yangzhou University |
| authorships[8].author_position | middle |
| authorships[8].raw_author_name | Shang Sun |
| authorships[8].is_corresponding | False |
| authorships[8].raw_affiliation_strings | Key Laboratory of Plant Functional Genomics of the Ministry of Education/Jiangsu Key Laboratory of Crop Genomics and Molecular Breeding, Agricultural College of Yangzhou University , Yangzhou 225009 , China |
| authorships[9].author.id | https://openalex.org/A5013741685 |
| authorships[9].author.orcid | https://orcid.org/0000-0002-4929-7621 |
| authorships[9].author.display_name | Peng Yan |
| authorships[9].countries | CN |
| authorships[9].affiliations[0].institution_ids | https://openalex.org/I20231570, https://openalex.org/I4210160507 |
| authorships[9].affiliations[0].raw_affiliation_string | State Key Laboratory of Protein and Plant Gene Research, School of Advanced Agricultural Sciences, Peking-Tsinghua Center for Life Sciences, Peking University , Beijing 100871 , China |
| authorships[9].affiliations[1].institution_ids | https://openalex.org/I4391768222, https://openalex.org/I76130692 |
| authorships[9].affiliations[1].raw_affiliation_string | State Key Laboratory of Plant Physiology and Biochemistry, College of Life Science, Zhejiang University , Hangzhou 310058 , China |
| authorships[9].institutions[0].id | https://openalex.org/I4391768222 |
| authorships[9].institutions[0].ror | https://ror.org/02yjhrp74 |
| authorships[9].institutions[0].type | facility |
| authorships[9].institutions[0].lineage | https://openalex.org/I4391768222, https://openalex.org/I52158045, https://openalex.org/I76130692 |
| authorships[9].institutions[0].country_code | |
| authorships[9].institutions[0].display_name | State Key Laboratory of Plant Physiology and Biochemistry |
| authorships[9].institutions[1].id | https://openalex.org/I4210160507 |
| authorships[9].institutions[1].ror | https://ror.org/05kje8j93 |
| authorships[9].institutions[1].type | education |
| authorships[9].institutions[1].lineage | https://openalex.org/I20231570, https://openalex.org/I4210160507, https://openalex.org/I99065089 |
| authorships[9].institutions[1].country_code | CN |
| authorships[9].institutions[1].display_name | Center for Life Sciences |
| authorships[9].institutions[2].id | https://openalex.org/I20231570 |
| authorships[9].institutions[2].ror | https://ror.org/02v51f717 |
| authorships[9].institutions[2].type | education |
| authorships[9].institutions[2].lineage | https://openalex.org/I20231570 |
| authorships[9].institutions[2].country_code | CN |
| authorships[9].institutions[2].display_name | Peking University |
| authorships[9].institutions[3].id | https://openalex.org/I76130692 |
| authorships[9].institutions[3].ror | https://ror.org/00a2xv884 |
| authorships[9].institutions[3].type | education |
| authorships[9].institutions[3].lineage | https://openalex.org/I76130692 |
| authorships[9].institutions[3].country_code | CN |
| authorships[9].institutions[3].display_name | Zhejiang University |
| authorships[9].author_position | middle |
| authorships[9].raw_author_name | Peng Yan |
| authorships[9].is_corresponding | False |
| authorships[9].raw_affiliation_strings | State Key Laboratory of Plant Physiology and Biochemistry, College of Life Science, Zhejiang University , Hangzhou 310058 , China, State Key Laboratory of Protein and Plant Gene Research, School of Advanced Agricultural Sciences, Peking-Tsinghua Center for Life Sciences, Peking University , Beijing 100871 , China |
| authorships[10].author.id | https://openalex.org/A5059389778 |
| authorships[10].author.orcid | https://orcid.org/0000-0002-2071-3150 |
| authorships[10].author.display_name | Zhiyun Gong |
| authorships[10].countries | CN |
| authorships[10].affiliations[0].institution_ids | https://openalex.org/I78978612 |
| authorships[10].affiliations[0].raw_affiliation_string | Key Laboratory of Plant Functional Genomics of the Ministry of Education/Jiangsu Key Laboratory of Crop Genomics and Molecular Breeding, Agricultural College of Yangzhou University , Yangzhou 225009 , China |
| authorships[10].institutions[0].id | https://openalex.org/I78978612 |
| authorships[10].institutions[0].ror | https://ror.org/03tqb8s11 |
| authorships[10].institutions[0].type | education |
| authorships[10].institutions[0].lineage | https://openalex.org/I78978612 |
| authorships[10].institutions[0].country_code | CN |
| authorships[10].institutions[0].display_name | Yangzhou University |
| authorships[10].author_position | middle |
| authorships[10].raw_author_name | Zhiyun Gong |
| authorships[10].is_corresponding | False |
| authorships[10].raw_affiliation_strings | Key Laboratory of Plant Functional Genomics of the Ministry of Education/Jiangsu Key Laboratory of Crop Genomics and Molecular Breeding, Agricultural College of Yangzhou University , Yangzhou 225009 , China |
| authorships[11].author.id | https://openalex.org/A5053643944 |
| authorships[11].author.orcid | https://orcid.org/0000-0001-9337-0657 |
| authorships[11].author.display_name | Xiaorong Mo |
| authorships[11].countries | CN |
| authorships[11].affiliations[0].institution_ids | https://openalex.org/I4391768222, https://openalex.org/I76130692 |
| authorships[11].affiliations[0].raw_affiliation_string | State Key Laboratory of Plant Physiology and Biochemistry, College of Life Science, Zhejiang University , Hangzhou 310058 , China |
| authorships[11].institutions[0].id | https://openalex.org/I4391768222 |
| authorships[11].institutions[0].ror | https://ror.org/02yjhrp74 |
| authorships[11].institutions[0].type | facility |
| authorships[11].institutions[0].lineage | https://openalex.org/I4391768222, https://openalex.org/I52158045, https://openalex.org/I76130692 |
| authorships[11].institutions[0].country_code | |
| authorships[11].institutions[0].display_name | State Key Laboratory of Plant Physiology and Biochemistry |
| authorships[11].institutions[1].id | https://openalex.org/I76130692 |
| authorships[11].institutions[1].ror | https://ror.org/00a2xv884 |
| authorships[11].institutions[1].type | education |
| authorships[11].institutions[1].lineage | https://openalex.org/I76130692 |
| authorships[11].institutions[1].country_code | CN |
| authorships[11].institutions[1].display_name | Zhejiang University |
| authorships[11].author_position | middle |
| authorships[11].raw_author_name | Xiaorong Mo |
| authorships[11].is_corresponding | False |
| authorships[11].raw_affiliation_strings | State Key Laboratory of Plant Physiology and Biochemistry, College of Life Science, Zhejiang University , Hangzhou 310058 , China |
| authorships[12].author.id | https://openalex.org/A5059319622 |
| authorships[12].author.orcid | https://orcid.org/0000-0002-6995-5126 |
| authorships[12].author.display_name | Genji Qin |
| authorships[12].countries | CN |
| authorships[12].affiliations[0].institution_ids | https://openalex.org/I20231570 |
| authorships[12].affiliations[0].raw_affiliation_string | State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Peking University , Beijing 100871 , China |
| authorships[12].institutions[0].id | https://openalex.org/I20231570 |
| authorships[12].institutions[0].ror | https://ror.org/02v51f717 |
| authorships[12].institutions[0].type | education |
| authorships[12].institutions[0].lineage | https://openalex.org/I20231570 |
| authorships[12].institutions[0].country_code | CN |
| authorships[12].institutions[0].display_name | Peking University |
| authorships[12].author_position | middle |
| authorships[12].raw_author_name | Genji Qin |
| authorships[12].is_corresponding | False |
| authorships[12].raw_affiliation_strings | State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Peking University , Beijing 100871 , China |
| authorships[13].author.id | https://openalex.org/A5060210266 |
| authorships[13].author.orcid | https://orcid.org/0000-0001-6351-6774 |
| authorships[13].author.display_name | Myriam Calonje |
| authorships[13].countries | ES |
| authorships[13].affiliations[0].institution_ids | https://openalex.org/I4210091303 |
| authorships[13].affiliations[0].raw_affiliation_string | Institute of Plant Biochemistry and Photosynthesis (IBVF-CSIC) , Avenida Américo Vespucio 49, 41092 Seville , Spain |
| authorships[13].institutions[0].id | https://openalex.org/I4210091303 |
| authorships[13].institutions[0].ror | https://ror.org/00hsc2364 |
| authorships[13].institutions[0].type | facility |
| authorships[13].institutions[0].lineage | https://openalex.org/I134820265, https://openalex.org/I4210091303, https://openalex.org/I79238269 |
| authorships[13].institutions[0].country_code | ES |
| authorships[13].institutions[0].display_name | Instituto de Bioquímica Vegetal y Fotosíntesis |
| authorships[13].author_position | middle |
| authorships[13].raw_author_name | Myriam Calonje |
| authorships[13].is_corresponding | False |
| authorships[13].raw_affiliation_strings | Institute of Plant Biochemistry and Photosynthesis (IBVF-CSIC) , Avenida Américo Vespucio 49, 41092 Seville , Spain |
| authorships[14].author.id | https://openalex.org/A5026010692 |
| authorships[14].author.orcid | https://orcid.org/0000-0002-2507-7990 |
| authorships[14].author.display_name | Yue Zhou |
| authorships[14].countries | CN |
| authorships[14].affiliations[0].institution_ids | https://openalex.org/I20231570, https://openalex.org/I4210160507 |
| authorships[14].affiliations[0].raw_affiliation_string | State Key Laboratory of Protein and Plant Gene Research, School of Advanced Agricultural Sciences, Peking-Tsinghua Center for Life Sciences, Peking University , Beijing 100871 , China |
| authorships[14].institutions[0].id | https://openalex.org/I4210160507 |
| authorships[14].institutions[0].ror | https://ror.org/05kje8j93 |
| authorships[14].institutions[0].type | education |
| authorships[14].institutions[0].lineage | https://openalex.org/I20231570, https://openalex.org/I4210160507, https://openalex.org/I99065089 |
| authorships[14].institutions[0].country_code | CN |
| authorships[14].institutions[0].display_name | Center for Life Sciences |
| authorships[14].institutions[1].id | https://openalex.org/I20231570 |
| authorships[14].institutions[1].ror | https://ror.org/02v51f717 |
| authorships[14].institutions[1].type | education |
| authorships[14].institutions[1].lineage | https://openalex.org/I20231570 |
| authorships[14].institutions[1].country_code | CN |
| authorships[14].institutions[1].display_name | Peking University |
| authorships[14].author_position | last |
| authorships[14].raw_author_name | Yue Zhou |
| authorships[14].is_corresponding | False |
| authorships[14].raw_affiliation_strings | State Key Laboratory of Protein and Plant Gene Research, School of Advanced Agricultural Sciences, Peking-Tsinghua Center for Life Sciences, Peking University , Beijing 100871 , China |
| has_content.pdf | True |
| has_content.grobid_xml | False |
| is_paratext | False |
| open_access.is_oa | True |
| open_access.oa_url | https://pmc.ncbi.nlm.nih.gov/articles/PMC10291032/pdf/koad112.pdf |
| open_access.oa_status | green |
| open_access.any_repository_has_fulltext | False |
| created_date | 2025-10-10T00:00:00 |
| display_name | Binding by the Polycomb complex component BMI1 and H2A monoubiquitination shape local and long-range interactions in the Arabidopsis genome |
| has_fulltext | False |
| is_retracted | False |
| updated_date | 2025-11-06T03:46:38.306776 |
| primary_topic.id | https://openalex.org/T10222 |
| primary_topic.field.id | https://openalex.org/fields/13 |
| primary_topic.field.display_name | Biochemistry, Genetics and Molecular Biology |
| primary_topic.score | 0.9998999834060669 |
| primary_topic.domain.id | https://openalex.org/domains/1 |
| primary_topic.domain.display_name | Life Sciences |
| primary_topic.subfield.id | https://openalex.org/subfields/1312 |
| primary_topic.subfield.display_name | Molecular Biology |
| primary_topic.display_name | Genomics and Chromatin Dynamics |
| related_works | https://openalex.org/W3093413024, https://openalex.org/W2392629404, https://openalex.org/W2061508314, https://openalex.org/W2544310727, https://openalex.org/W2373302771, https://openalex.org/W2154234231, https://openalex.org/W4379143607, https://openalex.org/W2181751096, https://openalex.org/W2110241629, https://openalex.org/W237351345 |
| cited_by_count | 37 |
| counts_by_year[0].year | 2025 |
| counts_by_year[0].cited_by_count | 16 |
| counts_by_year[1].year | 2024 |
| counts_by_year[1].cited_by_count | 15 |
| counts_by_year[2].year | 2023 |
| counts_by_year[2].cited_by_count | 6 |
| locations_count | 4 |
| best_oa_location.id | pmh:oai:pubmedcentral.nih.gov:10291032 |
| best_oa_location.is_oa | True |
| best_oa_location.source.id | https://openalex.org/S2764455111 |
| best_oa_location.source.issn | |
| best_oa_location.source.type | repository |
| best_oa_location.source.is_oa | False |
| best_oa_location.source.issn_l | |
| best_oa_location.source.is_core | False |
| best_oa_location.source.is_in_doaj | False |
| best_oa_location.source.display_name | PubMed Central |
| best_oa_location.source.host_organization | https://openalex.org/I1299303238 |
| best_oa_location.source.host_organization_name | National Institutes of Health |
| best_oa_location.source.host_organization_lineage | https://openalex.org/I1299303238 |
| best_oa_location.license | |
| best_oa_location.pdf_url | https://pmc.ncbi.nlm.nih.gov/articles/PMC10291032/pdf/koad112.pdf |
| best_oa_location.version | submittedVersion |
| best_oa_location.raw_type | Text |
| best_oa_location.license_id | |
| best_oa_location.is_accepted | False |
| best_oa_location.is_published | False |
| best_oa_location.raw_source_name | Plant Cell |
| best_oa_location.landing_page_url | https://www.ncbi.nlm.nih.gov/pmc/articles/10291032 |
| primary_location.id | doi:10.1093/plcell/koad112 |
| primary_location.is_oa | False |
| primary_location.source.id | https://openalex.org/S48849333 |
| primary_location.source.issn | 1040-4651, 1532-298X |
| primary_location.source.type | journal |
| primary_location.source.is_oa | False |
| primary_location.source.issn_l | 1040-4651 |
| primary_location.source.is_core | True |
| primary_location.source.is_in_doaj | False |
| primary_location.source.display_name | The Plant Cell |
| primary_location.source.host_organization | https://openalex.org/P4310311648 |
| primary_location.source.host_organization_name | Oxford University Press |
| primary_location.source.host_organization_lineage | https://openalex.org/P4310311648, https://openalex.org/P4310311647 |
| primary_location.source.host_organization_lineage_names | Oxford University Press, University of Oxford |
| primary_location.license | |
| primary_location.pdf_url | |
| primary_location.version | publishedVersion |
| primary_location.raw_type | journal-article |
| primary_location.license_id | |
| primary_location.is_accepted | True |
| primary_location.is_published | True |
| primary_location.raw_source_name | The Plant Cell |
| primary_location.landing_page_url | https://doi.org/10.1093/plcell/koad112 |
| publication_date | 2023-04-18 |
| publication_year | 2023 |
| referenced_works | https://openalex.org/W3094258389, https://openalex.org/W2142270559, https://openalex.org/W3215627751, https://openalex.org/W3160368783, https://openalex.org/W2604714362, https://openalex.org/W2093800333, https://openalex.org/W3040194462, https://openalex.org/W3001337713, https://openalex.org/W2107366172, https://openalex.org/W3027849952, https://openalex.org/W2086469122, https://openalex.org/W2036726776, https://openalex.org/W2042088824, https://openalex.org/W2089683406, https://openalex.org/W2988704258, https://openalex.org/W2163412235, https://openalex.org/W2003818145, https://openalex.org/W2884361791, https://openalex.org/W2770852695, https://openalex.org/W6774577604, https://openalex.org/W2493763501, https://openalex.org/W1980980040, https://openalex.org/W2401568148, https://openalex.org/W2025077689, https://openalex.org/W2040490059, https://openalex.org/W2604944932, https://openalex.org/W2074588926, https://openalex.org/W1985368543, https://openalex.org/W3125269882, https://openalex.org/W2014677321, https://openalex.org/W3163970006, https://openalex.org/W2146543824, https://openalex.org/W3083313330, https://openalex.org/W2745069609, https://openalex.org/W2102368172, https://openalex.org/W1968231873, https://openalex.org/W3035004652, https://openalex.org/W4200539173, https://openalex.org/W2002557938, https://openalex.org/W2020912279, https://openalex.org/W2124985265, https://openalex.org/W2618448276, https://openalex.org/W2090037139, https://openalex.org/W2126606466, https://openalex.org/W2747655851, https://openalex.org/W2397143686, https://openalex.org/W2088998472, https://openalex.org/W1997517143, https://openalex.org/W2979609478, https://openalex.org/W2160477539, https://openalex.org/W2028029749, https://openalex.org/W2119451273, https://openalex.org/W3029699748, https://openalex.org/W2084626940, https://openalex.org/W3092999803, https://openalex.org/W6770491839, https://openalex.org/W2480228390, https://openalex.org/W2136430672, https://openalex.org/W2951322997, https://openalex.org/W2158789637, https://openalex.org/W2341539131, https://openalex.org/W2745967441, https://openalex.org/W1831401007, https://openalex.org/W2185693210, https://openalex.org/W4318167595, https://openalex.org/W2557087167, https://openalex.org/W2937151182, https://openalex.org/W3123280470, https://openalex.org/W2129096780, https://openalex.org/W1994746083, https://openalex.org/W2123589780, https://openalex.org/W2952014756, https://openalex.org/W2747548029, https://openalex.org/W2024596205, https://openalex.org/W3137030566, https://openalex.org/W2153421910, https://openalex.org/W3118903864, https://openalex.org/W2109529242, https://openalex.org/W2170830174, https://openalex.org/W3107013728, https://openalex.org/W2146547152, https://openalex.org/W2171808845, https://openalex.org/W2952664869, https://openalex.org/W2607401015, https://openalex.org/W2149627698, https://openalex.org/W2904120442, https://openalex.org/W3165253641, https://openalex.org/W2986475075, https://openalex.org/W3007757690 |
| referenced_works_count | 89 |
| abstract_inverted_index.2 | 112 |
| abstract_inverted_index.a | 14, 208 |
| abstract_inverted_index.27 | 120 |
| abstract_inverted_index.3D | 100, 185 |
| abstract_inverted_index.H3 | 117 |
| abstract_inverted_index.We | 144 |
| abstract_inverted_index.as | 36, 207 |
| abstract_inverted_index.in | 17, 51, 58, 99, 129 |
| abstract_inverted_index.is | 5, 69, 97, 106 |
| abstract_inverted_index.it | 105, 155 |
| abstract_inverted_index.of | 41, 115, 133, 160, 168, 173, 200 |
| abstract_inverted_index.on | 118, 138 |
| abstract_inverted_index.or | 29, 175 |
| abstract_inverted_index.to | 12, 81 |
| abstract_inverted_index.we | 63 |
| abstract_inverted_index.121 | 140 |
| abstract_inverted_index.CDs | 73 |
| abstract_inverted_index.H2A | 136 |
| abstract_inverted_index.Our | 191 |
| abstract_inverted_index.and | 10, 85, 125, 183, 205 |
| abstract_inverted_index.are | 79, 142 |
| abstract_inverted_index.but | 154 |
| abstract_inverted_index.for | 211 |
| abstract_inverted_index.the | 37, 66, 92, 131, 158, 171, 198 |
| abstract_inverted_index.(3D) | 2 |
| abstract_inverted_index.PRC1 | 174 |
| abstract_inverted_index.PRC2 | 176 |
| abstract_inverted_index.Yet, | 103 |
| abstract_inverted_index.also | 156 |
| abstract_inverted_index.been | 34, 49 |
| abstract_inverted_index.gene | 19, 189 |
| abstract_inverted_index.have | 33, 48 |
| abstract_inverted_index.into | 71 |
| abstract_inverted_index.long | 203 |
| abstract_inverted_index.loss | 172 |
| abstract_inverted_index.play | 13 |
| abstract_inverted_index.role | 16 |
| abstract_inverted_index.show | 64 |
| abstract_inverted_index.that | 65, 108, 146, 194 |
| abstract_inverted_index.they | 55 |
| abstract_inverted_index.this | 90 |
| abstract_inverted_index.when | 165 |
| abstract_inverted_index.with | 74, 89, 149 |
| abstract_inverted_index.Here, | 62 |
| abstract_inverted_index.PRC1, | 147 |
| abstract_inverted_index.PRC2, | 150 |
| abstract_inverted_index.PRC2. | 169 |
| abstract_inverted_index.basic | 38 |
| abstract_inverted_index.clear | 107 |
| abstract_inverted_index.found | 50, 145 |
| abstract_inverted_index.group | 95 |
| abstract_inverted_index.helps | 122, 196 |
| abstract_inverted_index.local | 124, 162 |
| abstract_inverted_index.loops | 164, 204 |
| abstract_inverted_index.plant | 53 |
| abstract_inverted_index.point | 210 |
| abstract_inverted_index.seems | 11 |
| abstract_inverted_index.these | 46, 184 |
| abstract_inverted_index.units | 40, 47 |
| abstract_inverted_index.which | 78 |
| abstract_inverted_index.while | 104 |
| abstract_inverted_index.(CDs), | 32 |
| abstract_inverted_index.(TADs) | 28 |
| abstract_inverted_index.acting | 166 |
| abstract_inverted_index.affect | 188 |
| abstract_inverted_index.called | 24 |
| abstract_inverted_index.during | 8 |
| abstract_inverted_index.genome | 68 |
| abstract_inverted_index.highly | 6 |
| abstract_inverted_index.lysine | 119, 139 |
| abstract_inverted_index.serves | 206 |
| abstract_inverted_index.affects | 179 |
| abstract_inverted_index.changes | 186 |
| abstract_inverted_index.complex | 111 |
| abstract_inverted_index.crucial | 15 |
| abstract_inverted_index.docking | 209 |
| abstract_inverted_index.domains | 27, 31 |
| abstract_inverted_index.dynamic | 7 |
| abstract_inverted_index.escaped | 56 |
| abstract_inverted_index.hinders | 157 |
| abstract_inverted_index.histone | 116, 135 |
| abstract_inverted_index.notion, | 91 |
| abstract_inverted_index.plants, | 130 |
| abstract_inverted_index.prevent | 197 |
| abstract_inverted_index.results | 192 |
| abstract_inverted_index.several | 52 |
| abstract_inverted_index.suggest | 193 |
| abstract_inverted_index.Abstract | 0 |
| abstract_inverted_index.H3K27me3 | 212 |
| abstract_inverted_index.Polycomb | 94, 109 |
| abstract_inverted_index.activity | 177 |
| abstract_inverted_index.although | 45 |
| abstract_inverted_index.commonly | 23 |
| abstract_inverted_index.domains, | 22 |
| abstract_inverted_index.intra-CD | 84, 152 |
| abstract_inverted_index.involved | 98 |
| abstract_inverted_index.maintain | 82 |
| abstract_inverted_index.proposed | 35 |
| abstract_inverted_index.required | 80 |
| abstract_inverted_index.species, | 54 |
| abstract_inverted_index.together | 148 |
| abstract_inverted_index.unclear. | 143 |
| abstract_inverted_index.H2AK121ub | 195 |
| abstract_inverted_index.Moreover, | 170 |
| abstract_inverted_index.chromatin | 3, 42, 101, 127, 163, 181 |
| abstract_inverted_index.detection | 57 |
| abstract_inverted_index.different | 75 |
| abstract_inverted_index.establish | 123 |
| abstract_inverted_index.features, | 77 |
| abstract_inverted_index.formation | 159, 199 |
| abstract_inverted_index.machinery | 96 |
| abstract_inverted_index.maintains | 151 |
| abstract_inverted_index.(H3K27me3) | 121 |
| abstract_inverted_index.Consistent | 88 |
| abstract_inverted_index.contiguous | 72 |
| abstract_inverted_index.epigenetic | 76 |
| abstract_inverted_index.long-range | 86, 126, 180 |
| abstract_inverted_index.regulating | 18 |
| abstract_inverted_index.repressive | 110 |
| abstract_inverted_index.structural | 39 |
| abstract_inverted_index.thaliana). | 61 |
| abstract_inverted_index.(H2AK121ub) | 141 |
| abstract_inverted_index.Arabidopsis | 59, 67 |
| abstract_inverted_index.appropriate | 83 |
| abstract_inverted_index.associating | 26 |
| abstract_inverted_index.compartment | 30 |
| abstract_inverted_index.development | 9 |
| abstract_inverted_index.expression. | 20, 190 |
| abstract_inverted_index.partitioned | 70 |
| abstract_inverted_index.(Arabidopsis | 60 |
| abstract_inverted_index.implications | 132 |
| abstract_inverted_index.interactions | 128 |
| abstract_inverted_index.organization | 4 |
| abstract_inverted_index.transposable | 201 |
| abstract_inverted_index.PRC1-mediated | 134 |
| abstract_inverted_index.Surprisingly, | 44 |
| abstract_inverted_index.independently | 167 |
| abstract_inverted_index.interactions, | 153, 182 |
| abstract_inverted_index.interactions. | 87 |
| abstract_inverted_index.organization. | 43, 102 |
| abstract_inverted_index.topologically | 25 |
| abstract_inverted_index.differentially | 178, 187 |
| abstract_inverted_index.incorporation. | 213 |
| abstract_inverted_index.trimethylation | 114 |
| abstract_inverted_index.(PRC2)-mediated | 113 |
| abstract_inverted_index.H3K4me3-enriched | 161 |
| abstract_inverted_index.Self-interacting | 21 |
| abstract_inverted_index.Three-dimensional | 1 |
| abstract_inverted_index.histone-modifying | 93 |
| abstract_inverted_index.monoubiquitination | 137 |
| abstract_inverted_index.element/H3K27me1-rich | 202 |
| cited_by_percentile_year.max | 100 |
| cited_by_percentile_year.min | 98 |
| countries_distinct_count | 2 |
| institutions_distinct_count | 15 |
| sustainable_development_goals[0].id | https://metadata.un.org/sdg/15 |
| sustainable_development_goals[0].score | 0.6499999761581421 |
| sustainable_development_goals[0].display_name | Life in Land |
| citation_normalized_percentile.value | 0.98782027 |
| citation_normalized_percentile.is_in_top_1_percent | True |
| citation_normalized_percentile.is_in_top_10_percent | True |