Comprehensive Analysis of Placental DNA Methylation Changes and Fetal Birth Weight in Pigs Article Swipe
Baohua Tan
,
Liyao Xiao
,
Yongzhong Wang
,
Chen Zhou
,
Huijun Huang
,
Zicong Li
,
Linjun Hong
,
Gengyuan Cai
,
Zhenfang Wu
,
Ting Gu
·
YOU?
·
· 2024
· Open Access
·
· DOI: https://doi.org/10.3390/ijms25147702
YOU?
·
· 2024
· Open Access
·
· DOI: https://doi.org/10.3390/ijms25147702
Birth weight is a complex multifactorial trait relevant to health states and disease risks in later life. The placenta is essential for proper fetal growth and facilitates gas, nutrient, and waste exchange between the mother and developing fetus. How changes in placental DNA methylation affect fetal birth weight remains to be fully elucidated. In this study, we used whole-genome bisulfite sequencing and RNA sequencing to reveal a global map of DNA methylation and gene expression changes between the placentas of highest birth weight and lowest birth weight piglets in the same litters. The transcriptome analysis identified 1682 differential expressed genes and revealed key transcriptional properties in distinct placentas. We also identified key transcription factors that may drive the differences in DNA methylome patterns between placentas. The decrease in DNA methylation level in the promoter was associated with the transcriptional activation of genes associated with angiogenesis, extracellular matrix remodeling, and transmembrane transport. Our results revealed the regulatory role of DNA methylation in gene transcription activity leading to the differences in placental morphological structures and birth weights of piglets. These results could provide novel clues to clarify the underlying regulatory mechanisms of placental development and fetal growth.
Related Topics
Concepts
DNA methylation
Biology
Transcriptome
Placenta
Epigenetics
Fetus
Differentially methylated regions
Gene
Methylation
Bisulfite sequencing
Regulation of gene expression
Andrology
Gene expression
Genetics
Pregnancy
Medicine
Metadata
- Type
- article
- Language
- en
- Landing Page
- https://doi.org/10.3390/ijms25147702
- https://www.mdpi.com/1422-0067/25/14/7702/pdf?version=1721281513
- OA Status
- gold
- Cited By
- 2
- References
- 54
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W4400643894
All OpenAlex metadata
Raw OpenAlex JSON
- OpenAlex ID
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https://openalex.org/W4400643894Canonical identifier for this work in OpenAlex
- DOI
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https://doi.org/10.3390/ijms25147702Digital Object Identifier
- Title
-
Comprehensive Analysis of Placental DNA Methylation Changes and Fetal Birth Weight in PigsWork title
- Type
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articleOpenAlex work type
- Language
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enPrimary language
- Publication year
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2024Year of publication
- Publication date
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2024-07-13Full publication date if available
- Authors
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Baohua Tan, Liyao Xiao, Yongzhong Wang, Chen Zhou, Huijun Huang, Zicong Li, Linjun Hong, Gengyuan Cai, Zhenfang Wu, Ting GuList of authors in order
- Landing page
-
https://doi.org/10.3390/ijms25147702Publisher landing page
- PDF URL
-
https://www.mdpi.com/1422-0067/25/14/7702/pdf?version=1721281513Direct link to full text PDF
- Open access
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YesWhether a free full text is available
- OA status
-
goldOpen access status per OpenAlex
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https://www.mdpi.com/1422-0067/25/14/7702/pdf?version=1721281513Direct OA link when available
- Concepts
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DNA methylation, Biology, Transcriptome, Placenta, Epigenetics, Fetus, Differentially methylated regions, Gene, Methylation, Bisulfite sequencing, Regulation of gene expression, Andrology, Gene expression, Genetics, Pregnancy, MedicineTop concepts (fields/topics) attached by OpenAlex
- Cited by
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2Total citation count in OpenAlex
- Citations by year (recent)
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2025: 1, 2024: 1Per-year citation counts (last 5 years)
- References (count)
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54Number of works referenced by this work
- Related works (count)
-
10Other works algorithmically related by OpenAlex
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| abstract_inverted_index.birth | 46, 81, 85, 173 |
| abstract_inverted_index.clues | 182 |
| abstract_inverted_index.could | 179 |
| abstract_inverted_index.drive | 116 |
| abstract_inverted_index.fetal | 23, 45, 193 |
| abstract_inverted_index.fully | 51 |
| abstract_inverted_index.genes | 99, 141 |
| abstract_inverted_index.later | 15 |
| abstract_inverted_index.level | 130 |
| abstract_inverted_index.life. | 16 |
| abstract_inverted_index.novel | 181 |
| abstract_inverted_index.risks | 13 |
| abstract_inverted_index.trait | 6 |
| abstract_inverted_index.waste | 30 |
| abstract_inverted_index.affect | 44 |
| abstract_inverted_index.fetus. | 37 |
| abstract_inverted_index.global | 67 |
| abstract_inverted_index.growth | 24 |
| abstract_inverted_index.health | 9 |
| abstract_inverted_index.lowest | 84 |
| abstract_inverted_index.matrix | 146 |
| abstract_inverted_index.mother | 34 |
| abstract_inverted_index.proper | 22 |
| abstract_inverted_index.reveal | 65 |
| abstract_inverted_index.states | 10 |
| abstract_inverted_index.study, | 55 |
| abstract_inverted_index.weight | 1, 47, 82, 86 |
| abstract_inverted_index.between | 32, 76, 123 |
| abstract_inverted_index.changes | 39, 75 |
| abstract_inverted_index.clarify | 184 |
| abstract_inverted_index.complex | 4 |
| abstract_inverted_index.disease | 12 |
| abstract_inverted_index.factors | 113 |
| abstract_inverted_index.growth. | 194 |
| abstract_inverted_index.highest | 80 |
| abstract_inverted_index.leading | 164 |
| abstract_inverted_index.piglets | 87 |
| abstract_inverted_index.provide | 180 |
| abstract_inverted_index.remains | 48 |
| abstract_inverted_index.results | 152, 178 |
| abstract_inverted_index.weights | 174 |
| abstract_inverted_index.activity | 163 |
| abstract_inverted_index.analysis | 94 |
| abstract_inverted_index.decrease | 126 |
| abstract_inverted_index.distinct | 106 |
| abstract_inverted_index.exchange | 31 |
| abstract_inverted_index.litters. | 91 |
| abstract_inverted_index.patterns | 122 |
| abstract_inverted_index.piglets. | 176 |
| abstract_inverted_index.placenta | 18 |
| abstract_inverted_index.promoter | 133 |
| abstract_inverted_index.relevant | 7 |
| abstract_inverted_index.revealed | 101, 153 |
| abstract_inverted_index.bisulfite | 59 |
| abstract_inverted_index.essential | 20 |
| abstract_inverted_index.expressed | 98 |
| abstract_inverted_index.methylome | 121 |
| abstract_inverted_index.nutrient, | 28 |
| abstract_inverted_index.placental | 41, 169, 190 |
| abstract_inverted_index.placentas | 78 |
| abstract_inverted_index.activation | 139 |
| abstract_inverted_index.associated | 135, 142 |
| abstract_inverted_index.developing | 36 |
| abstract_inverted_index.expression | 74 |
| abstract_inverted_index.identified | 95, 110 |
| abstract_inverted_index.mechanisms | 188 |
| abstract_inverted_index.placentas. | 107, 124 |
| abstract_inverted_index.properties | 104 |
| abstract_inverted_index.regulatory | 155, 187 |
| abstract_inverted_index.sequencing | 60, 63 |
| abstract_inverted_index.structures | 171 |
| abstract_inverted_index.transport. | 150 |
| abstract_inverted_index.underlying | 186 |
| abstract_inverted_index.development | 191 |
| abstract_inverted_index.differences | 118, 167 |
| abstract_inverted_index.elucidated. | 52 |
| abstract_inverted_index.facilitates | 26 |
| abstract_inverted_index.methylation | 43, 71, 129, 159 |
| abstract_inverted_index.remodeling, | 147 |
| abstract_inverted_index.differential | 97 |
| abstract_inverted_index.whole-genome | 58 |
| abstract_inverted_index.angiogenesis, | 144 |
| abstract_inverted_index.extracellular | 145 |
| abstract_inverted_index.morphological | 170 |
| abstract_inverted_index.transcription | 112, 162 |
| abstract_inverted_index.transcriptome | 93 |
| abstract_inverted_index.transmembrane | 149 |
| abstract_inverted_index.multifactorial | 5 |
| abstract_inverted_index.transcriptional | 103, 138 |
| cited_by_percentile_year.max | 95 |
| cited_by_percentile_year.min | 90 |
| corresponding_author_ids | https://openalex.org/A5009689461 |
| countries_distinct_count | 1 |
| institutions_distinct_count | 10 |
| corresponding_institution_ids | https://openalex.org/I101479585 |
| citation_normalized_percentile.value | 0.68455887 |
| citation_normalized_percentile.is_in_top_1_percent | False |
| citation_normalized_percentile.is_in_top_10_percent | False |