DAISIEprep: an R package for the extraction and formatting of data for the island biogeography model DAISIE Article Swipe
Joshua W. Lambert
,
Lizzie Roeble
,
Théo Pannetier
,
Rampal S. Etienne
,
Luís Valente
·
YOU?
·
· 2023
· Open Access
·
· DOI: https://doi.org/10.1101/2023.02.19.529129
YOU?
·
· 2023
· Open Access
·
· DOI: https://doi.org/10.1101/2023.02.19.529129
Phylogenetic trees are commonly used to answer questions on biogeographical and diversification histories of different groups. Recently, new approaches have been developed that use community phylogenetic trees requiring a data structure distinct from the single phylogenetic trees that are commonly used, which may be a barrier to the utilisation of these approaches. DAISIE (Dynamic Assembly of Islands through Speciation, Immigration and Extinction) is an island biogeography model that can estimate rates of colonisation, speciation and extinction from phylogenetic data across insular communities, as well as simulate islands under those rates. Here we describe the DAISIEprep R package, a set of pre-processing tools to aid the extraction of data from one or many phylogenetic trees to generate data in a format interpretable by DAISIE for the application of island biogeography inference models. We present examples to illustrate the various data types that can be used. The package includes simple algorithms to extract data on island colonists and account for bio-geographical, topological and taxonomic uncertainty. It also allows flexible incorporation of either missing species or entire insular lineages when phylogenetic data are not available. DAISIEprep enables reproducible and user-friendly data extraction and formatting, and will facili-tate addressing questions about island biogeography, diversification and anthropogenic impacts in insular systems.
Related Topics
Concepts
Biogeography
Phylogenetic tree
Insular biogeography
Genetic algorithm
R package
Taxon
Phylogenetic comparative methods
Ecology
Geography
Biology
Evolutionary biology
Computer science
Gene
Computational science
Biochemistry
Metadata
- Type
- preprint
- Language
- en
- Landing Page
- https://doi.org/10.1101/2023.02.19.529129
- https://www.biorxiv.org/content/biorxiv/early/2023/02/21/2023.02.19.529129.full.pdf
- OA Status
- green
- References
- 58
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W4321440850
All OpenAlex metadata
Raw OpenAlex JSON
- OpenAlex ID
-
https://openalex.org/W4321440850Canonical identifier for this work in OpenAlex
- DOI
-
https://doi.org/10.1101/2023.02.19.529129Digital Object Identifier
- Title
-
DAISIEprep: an R package for the extraction and formatting of data for the island biogeography model DAISIEWork title
- Type
-
preprintOpenAlex work type
- Language
-
enPrimary language
- Publication year
-
2023Year of publication
- Publication date
-
2023-02-21Full publication date if available
- Authors
-
Joshua W. Lambert, Lizzie Roeble, Théo Pannetier, Rampal S. Etienne, Luís ValenteList of authors in order
- Landing page
-
https://doi.org/10.1101/2023.02.19.529129Publisher landing page
- PDF URL
-
https://www.biorxiv.org/content/biorxiv/early/2023/02/21/2023.02.19.529129.full.pdfDirect link to full text PDF
- Open access
-
YesWhether a free full text is available
- OA status
-
greenOpen access status per OpenAlex
- OA URL
-
https://www.biorxiv.org/content/biorxiv/early/2023/02/21/2023.02.19.529129.full.pdfDirect OA link when available
- Concepts
-
Biogeography, Phylogenetic tree, Insular biogeography, Genetic algorithm, R package, Taxon, Phylogenetic comparative methods, Ecology, Geography, Biology, Evolutionary biology, Computer science, Gene, Computational science, BiochemistryTop concepts (fields/topics) attached by OpenAlex
- Cited by
-
0Total citation count in OpenAlex
- References (count)
-
58Number of works referenced by this work
- Related works (count)
-
10Other works algorithmically related by OpenAlex
Full payload
| id | https://openalex.org/W4321440850 |
|---|---|
| doi | https://doi.org/10.1101/2023.02.19.529129 |
| ids.doi | https://doi.org/10.1101/2023.02.19.529129 |
| ids.openalex | https://openalex.org/W4321440850 |
| fwci | 0.0 |
| type | preprint |
| title | DAISIEprep: an R package for the extraction and formatting of data for the island biogeography model DAISIE |
| biblio.issue | |
| biblio.volume | |
| biblio.last_page | |
| biblio.first_page | |
| topics[0].id | https://openalex.org/T11354 |
| topics[0].field.id | https://openalex.org/fields/19 |
| topics[0].field.display_name | Earth and Planetary Sciences |
| topics[0].score | 0.9994999766349792 |
| topics[0].domain.id | https://openalex.org/domains/3 |
| topics[0].domain.display_name | Physical Sciences |
| topics[0].subfield.id | https://openalex.org/subfields/1911 |
| topics[0].subfield.display_name | Paleontology |
| topics[0].display_name | Evolution and Paleontology Studies |
| topics[1].id | https://openalex.org/T10895 |
| topics[1].field.id | https://openalex.org/fields/23 |
| topics[1].field.display_name | Environmental Science |
| topics[1].score | 0.9987999796867371 |
| topics[1].domain.id | https://openalex.org/domains/3 |
| topics[1].domain.display_name | Physical Sciences |
| topics[1].subfield.id | https://openalex.org/subfields/2302 |
| topics[1].subfield.display_name | Ecological Modeling |
| topics[1].display_name | Species Distribution and Climate Change |
| topics[2].id | https://openalex.org/T10005 |
| topics[2].field.id | https://openalex.org/fields/23 |
| topics[2].field.display_name | Environmental Science |
| topics[2].score | 0.9980000257492065 |
| topics[2].domain.id | https://openalex.org/domains/3 |
| topics[2].domain.display_name | Physical Sciences |
| topics[2].subfield.id | https://openalex.org/subfields/2309 |
| topics[2].subfield.display_name | Nature and Landscape Conservation |
| topics[2].display_name | Ecology and Vegetation Dynamics Studies |
| is_xpac | False |
| apc_list | |
| apc_paid | |
| concepts[0].id | https://openalex.org/C123575903 |
| concepts[0].level | 2 |
| concepts[0].score | 0.7682172060012817 |
| concepts[0].wikidata | https://www.wikidata.org/wiki/Q52106 |
| concepts[0].display_name | Biogeography |
| concepts[1].id | https://openalex.org/C193252679 |
| concepts[1].level | 3 |
| concepts[1].score | 0.7540411949157715 |
| concepts[1].wikidata | https://www.wikidata.org/wiki/Q242125 |
| concepts[1].display_name | Phylogenetic tree |
| concepts[2].id | https://openalex.org/C202682190 |
| concepts[2].level | 3 |
| concepts[2].score | 0.5836175680160522 |
| concepts[2].wikidata | https://www.wikidata.org/wiki/Q1664460 |
| concepts[2].display_name | Insular biogeography |
| concepts[3].id | https://openalex.org/C2776838516 |
| concepts[3].level | 2 |
| concepts[3].score | 0.5059928297996521 |
| concepts[3].wikidata | https://www.wikidata.org/wiki/Q187787 |
| concepts[3].display_name | Genetic algorithm |
| concepts[4].id | https://openalex.org/C2984074130 |
| concepts[4].level | 2 |
| concepts[4].score | 0.4697846472263336 |
| concepts[4].wikidata | https://www.wikidata.org/wiki/Q73539779 |
| concepts[4].display_name | R package |
| concepts[5].id | https://openalex.org/C71640776 |
| concepts[5].level | 2 |
| concepts[5].score | 0.43495064973831177 |
| concepts[5].wikidata | https://www.wikidata.org/wiki/Q16521 |
| concepts[5].display_name | Taxon |
| concepts[6].id | https://openalex.org/C176771619 |
| concepts[6].level | 4 |
| concepts[6].score | 0.41921207308769226 |
| concepts[6].wikidata | https://www.wikidata.org/wiki/Q7189434 |
| concepts[6].display_name | Phylogenetic comparative methods |
| concepts[7].id | https://openalex.org/C18903297 |
| concepts[7].level | 1 |
| concepts[7].score | 0.40171119570732117 |
| concepts[7].wikidata | https://www.wikidata.org/wiki/Q7150 |
| concepts[7].display_name | Ecology |
| concepts[8].id | https://openalex.org/C205649164 |
| concepts[8].level | 0 |
| concepts[8].score | 0.37774553894996643 |
| concepts[8].wikidata | https://www.wikidata.org/wiki/Q1071 |
| concepts[8].display_name | Geography |
| concepts[9].id | https://openalex.org/C86803240 |
| concepts[9].level | 0 |
| concepts[9].score | 0.3775646686553955 |
| concepts[9].wikidata | https://www.wikidata.org/wiki/Q420 |
| concepts[9].display_name | Biology |
| concepts[10].id | https://openalex.org/C78458016 |
| concepts[10].level | 1 |
| concepts[10].score | 0.32611674070358276 |
| concepts[10].wikidata | https://www.wikidata.org/wiki/Q840400 |
| concepts[10].display_name | Evolutionary biology |
| concepts[11].id | https://openalex.org/C41008148 |
| concepts[11].level | 0 |
| concepts[11].score | 0.2186608910560608 |
| concepts[11].wikidata | https://www.wikidata.org/wiki/Q21198 |
| concepts[11].display_name | Computer science |
| concepts[12].id | https://openalex.org/C104317684 |
| concepts[12].level | 2 |
| concepts[12].score | 0.0 |
| concepts[12].wikidata | https://www.wikidata.org/wiki/Q7187 |
| concepts[12].display_name | Gene |
| concepts[13].id | https://openalex.org/C459310 |
| concepts[13].level | 1 |
| concepts[13].score | 0.0 |
| concepts[13].wikidata | https://www.wikidata.org/wiki/Q117801 |
| concepts[13].display_name | Computational science |
| concepts[14].id | https://openalex.org/C55493867 |
| concepts[14].level | 1 |
| concepts[14].score | 0.0 |
| concepts[14].wikidata | https://www.wikidata.org/wiki/Q7094 |
| concepts[14].display_name | Biochemistry |
| keywords[0].id | https://openalex.org/keywords/biogeography |
| keywords[0].score | 0.7682172060012817 |
| keywords[0].display_name | Biogeography |
| keywords[1].id | https://openalex.org/keywords/phylogenetic-tree |
| keywords[1].score | 0.7540411949157715 |
| keywords[1].display_name | Phylogenetic tree |
| keywords[2].id | https://openalex.org/keywords/insular-biogeography |
| keywords[2].score | 0.5836175680160522 |
| keywords[2].display_name | Insular biogeography |
| keywords[3].id | https://openalex.org/keywords/genetic-algorithm |
| keywords[3].score | 0.5059928297996521 |
| keywords[3].display_name | Genetic algorithm |
| keywords[4].id | https://openalex.org/keywords/r-package |
| keywords[4].score | 0.4697846472263336 |
| keywords[4].display_name | R package |
| keywords[5].id | https://openalex.org/keywords/taxon |
| keywords[5].score | 0.43495064973831177 |
| keywords[5].display_name | Taxon |
| keywords[6].id | https://openalex.org/keywords/phylogenetic-comparative-methods |
| keywords[6].score | 0.41921207308769226 |
| keywords[6].display_name | Phylogenetic comparative methods |
| keywords[7].id | https://openalex.org/keywords/ecology |
| keywords[7].score | 0.40171119570732117 |
| keywords[7].display_name | Ecology |
| keywords[8].id | https://openalex.org/keywords/geography |
| keywords[8].score | 0.37774553894996643 |
| keywords[8].display_name | Geography |
| keywords[9].id | https://openalex.org/keywords/biology |
| keywords[9].score | 0.3775646686553955 |
| keywords[9].display_name | Biology |
| keywords[10].id | https://openalex.org/keywords/evolutionary-biology |
| keywords[10].score | 0.32611674070358276 |
| keywords[10].display_name | Evolutionary biology |
| keywords[11].id | https://openalex.org/keywords/computer-science |
| keywords[11].score | 0.2186608910560608 |
| keywords[11].display_name | Computer science |
| language | en |
| locations[0].id | doi:10.1101/2023.02.19.529129 |
| locations[0].is_oa | True |
| locations[0].source.id | https://openalex.org/S4306402567 |
| locations[0].source.issn | |
| locations[0].source.type | repository |
| locations[0].source.is_oa | False |
| locations[0].source.issn_l | |
| locations[0].source.is_core | False |
| locations[0].source.is_in_doaj | False |
| locations[0].source.display_name | bioRxiv (Cold Spring Harbor Laboratory) |
| locations[0].source.host_organization | https://openalex.org/I2750212522 |
| locations[0].source.host_organization_name | Cold Spring Harbor Laboratory |
| locations[0].source.host_organization_lineage | https://openalex.org/I2750212522 |
| locations[0].license | cc-by-nc |
| locations[0].pdf_url | https://www.biorxiv.org/content/biorxiv/early/2023/02/21/2023.02.19.529129.full.pdf |
| locations[0].version | acceptedVersion |
| locations[0].raw_type | posted-content |
| locations[0].license_id | https://openalex.org/licenses/cc-by-nc |
| locations[0].is_accepted | True |
| locations[0].is_published | False |
| locations[0].raw_source_name | |
| locations[0].landing_page_url | https://doi.org/10.1101/2023.02.19.529129 |
| indexed_in | crossref |
| authorships[0].author.id | https://openalex.org/A5090325219 |
| authorships[0].author.orcid | https://orcid.org/0000-0001-5218-3046 |
| authorships[0].author.display_name | Joshua W. Lambert |
| authorships[0].countries | NL |
| authorships[0].affiliations[0].institution_ids | https://openalex.org/I169381384 |
| authorships[0].affiliations[0].raw_affiliation_string | Groningen Institute for Evolutionary Life Sciences, University of Groningen, Box 03, 9700 CC Groningen, The Netherlands |
| authorships[0].institutions[0].id | https://openalex.org/I169381384 |
| authorships[0].institutions[0].ror | https://ror.org/012p63287 |
| authorships[0].institutions[0].type | education |
| authorships[0].institutions[0].lineage | https://openalex.org/I169381384 |
| authorships[0].institutions[0].country_code | NL |
| authorships[0].institutions[0].display_name | University of Groningen |
| authorships[0].author_position | first |
| authorships[0].raw_author_name | Joshua W. Lambert |
| authorships[0].is_corresponding | True |
| authorships[0].raw_affiliation_strings | Groningen Institute for Evolutionary Life Sciences, University of Groningen, Box 03, 9700 CC Groningen, The Netherlands |
| authorships[1].author.id | https://openalex.org/A5045573355 |
| authorships[1].author.orcid | https://orcid.org/0000-0003-3664-4222 |
| authorships[1].author.display_name | Lizzie Roeble |
| authorships[1].countries | NL |
| authorships[1].affiliations[0].institution_ids | https://openalex.org/I169381384 |
| authorships[1].affiliations[0].raw_affiliation_string | Groningen Institute for Evolutionary Life Sciences, University of Groningen, Box 03, 9700 CC Groningen, The Netherlands |
| authorships[1].affiliations[1].institution_ids | https://openalex.org/I1295562517 |
| authorships[1].affiliations[1].raw_affiliation_string | Naturalis Biodiversity Center, Darwinweg , 333 CR Leiden, The Netherlands |
| authorships[1].institutions[0].id | https://openalex.org/I1295562517 |
| authorships[1].institutions[0].ror | https://ror.org/0566bfb96 |
| authorships[1].institutions[0].type | archive |
| authorships[1].institutions[0].lineage | https://openalex.org/I1295562517 |
| authorships[1].institutions[0].country_code | NL |
| authorships[1].institutions[0].display_name | Naturalis Biodiversity Center |
| authorships[1].institutions[1].id | https://openalex.org/I169381384 |
| authorships[1].institutions[1].ror | https://ror.org/012p63287 |
| authorships[1].institutions[1].type | education |
| authorships[1].institutions[1].lineage | https://openalex.org/I169381384 |
| authorships[1].institutions[1].country_code | NL |
| authorships[1].institutions[1].display_name | University of Groningen |
| authorships[1].author_position | middle |
| authorships[1].raw_author_name | Lizzie Roeble |
| authorships[1].is_corresponding | False |
| authorships[1].raw_affiliation_strings | Groningen Institute for Evolutionary Life Sciences, University of Groningen, Box 03, 9700 CC Groningen, The Netherlands, Naturalis Biodiversity Center, Darwinweg , 333 CR Leiden, The Netherlands |
| authorships[2].author.id | https://openalex.org/A5048036371 |
| authorships[2].author.orcid | https://orcid.org/0000-0002-8424-3573 |
| authorships[2].author.display_name | Théo Pannetier |
| authorships[2].countries | NL |
| authorships[2].affiliations[0].institution_ids | https://openalex.org/I169381384 |
| authorships[2].affiliations[0].raw_affiliation_string | Groningen Institute for Evolutionary Life Sciences, University of Groningen, Box 03, 9700 CC Groningen, The Netherlands |
| authorships[2].institutions[0].id | https://openalex.org/I169381384 |
| authorships[2].institutions[0].ror | https://ror.org/012p63287 |
| authorships[2].institutions[0].type | education |
| authorships[2].institutions[0].lineage | https://openalex.org/I169381384 |
| authorships[2].institutions[0].country_code | NL |
| authorships[2].institutions[0].display_name | University of Groningen |
| authorships[2].author_position | middle |
| authorships[2].raw_author_name | Théo Pannetier |
| authorships[2].is_corresponding | False |
| authorships[2].raw_affiliation_strings | Groningen Institute for Evolutionary Life Sciences, University of Groningen, Box 03, 9700 CC Groningen, The Netherlands |
| authorships[3].author.id | https://openalex.org/A5056389738 |
| authorships[3].author.orcid | https://orcid.org/0000-0003-2142-7612 |
| authorships[3].author.display_name | Rampal S. Etienne |
| authorships[3].countries | NL |
| authorships[3].affiliations[0].institution_ids | https://openalex.org/I169381384 |
| authorships[3].affiliations[0].raw_affiliation_string | Groningen Institute for Evolutionary Life Sciences, University of Groningen, Box 03, 9700 CC Groningen, The Netherlands |
| authorships[3].institutions[0].id | https://openalex.org/I169381384 |
| authorships[3].institutions[0].ror | https://ror.org/012p63287 |
| authorships[3].institutions[0].type | education |
| authorships[3].institutions[0].lineage | https://openalex.org/I169381384 |
| authorships[3].institutions[0].country_code | NL |
| authorships[3].institutions[0].display_name | University of Groningen |
| authorships[3].author_position | middle |
| authorships[3].raw_author_name | Rampal S. Etienne |
| authorships[3].is_corresponding | False |
| authorships[3].raw_affiliation_strings | Groningen Institute for Evolutionary Life Sciences, University of Groningen, Box 03, 9700 CC Groningen, The Netherlands |
| authorships[4].author.id | https://openalex.org/A5081242912 |
| authorships[4].author.orcid | https://orcid.org/0000-0003-4247-8785 |
| authorships[4].author.display_name | Luís Valente |
| authorships[4].countries | NL |
| authorships[4].affiliations[0].institution_ids | https://openalex.org/I169381384 |
| authorships[4].affiliations[0].raw_affiliation_string | Groningen Institute for Evolutionary Life Sciences, University of Groningen, Box 03, 9700 CC Groningen, The Netherlands |
| authorships[4].affiliations[1].institution_ids | https://openalex.org/I1295562517 |
| authorships[4].affiliations[1].raw_affiliation_string | Naturalis Biodiversity Center, Darwinweg , 333 CR Leiden, The Netherlands |
| authorships[4].institutions[0].id | https://openalex.org/I1295562517 |
| authorships[4].institutions[0].ror | https://ror.org/0566bfb96 |
| authorships[4].institutions[0].type | archive |
| authorships[4].institutions[0].lineage | https://openalex.org/I1295562517 |
| authorships[4].institutions[0].country_code | NL |
| authorships[4].institutions[0].display_name | Naturalis Biodiversity Center |
| authorships[4].institutions[1].id | https://openalex.org/I169381384 |
| authorships[4].institutions[1].ror | https://ror.org/012p63287 |
| authorships[4].institutions[1].type | education |
| authorships[4].institutions[1].lineage | https://openalex.org/I169381384 |
| authorships[4].institutions[1].country_code | NL |
| authorships[4].institutions[1].display_name | University of Groningen |
| authorships[4].author_position | last |
| authorships[4].raw_author_name | Luis Valente |
| authorships[4].is_corresponding | False |
| authorships[4].raw_affiliation_strings | Groningen Institute for Evolutionary Life Sciences, University of Groningen, Box 03, 9700 CC Groningen, The Netherlands, Naturalis Biodiversity Center, Darwinweg , 333 CR Leiden, The Netherlands |
| has_content.pdf | True |
| has_content.grobid_xml | True |
| is_paratext | False |
| open_access.is_oa | True |
| open_access.oa_url | https://www.biorxiv.org/content/biorxiv/early/2023/02/21/2023.02.19.529129.full.pdf |
| open_access.oa_status | green |
| open_access.any_repository_has_fulltext | False |
| created_date | 2025-10-10T00:00:00 |
| display_name | DAISIEprep: an R package for the extraction and formatting of data for the island biogeography model DAISIE |
| has_fulltext | True |
| is_retracted | False |
| updated_date | 2025-11-06T03:46:38.306776 |
| primary_topic.id | https://openalex.org/T11354 |
| primary_topic.field.id | https://openalex.org/fields/19 |
| primary_topic.field.display_name | Earth and Planetary Sciences |
| primary_topic.score | 0.9994999766349792 |
| primary_topic.domain.id | https://openalex.org/domains/3 |
| primary_topic.domain.display_name | Physical Sciences |
| primary_topic.subfield.id | https://openalex.org/subfields/1911 |
| primary_topic.subfield.display_name | Paleontology |
| primary_topic.display_name | Evolution and Paleontology Studies |
| related_works | https://openalex.org/W2197990580, https://openalex.org/W2282895916, https://openalex.org/W4210449133, https://openalex.org/W2102855049, https://openalex.org/W3019891064, https://openalex.org/W4313411668, https://openalex.org/W136766867, https://openalex.org/W4221079118, https://openalex.org/W2010327220, https://openalex.org/W112799945 |
| cited_by_count | 0 |
| locations_count | 1 |
| best_oa_location.id | doi:10.1101/2023.02.19.529129 |
| best_oa_location.is_oa | True |
| best_oa_location.source.id | https://openalex.org/S4306402567 |
| best_oa_location.source.issn | |
| best_oa_location.source.type | repository |
| best_oa_location.source.is_oa | False |
| best_oa_location.source.issn_l | |
| best_oa_location.source.is_core | False |
| best_oa_location.source.is_in_doaj | False |
| best_oa_location.source.display_name | bioRxiv (Cold Spring Harbor Laboratory) |
| best_oa_location.source.host_organization | https://openalex.org/I2750212522 |
| best_oa_location.source.host_organization_name | Cold Spring Harbor Laboratory |
| best_oa_location.source.host_organization_lineage | https://openalex.org/I2750212522 |
| best_oa_location.license | cc-by-nc |
| best_oa_location.pdf_url | https://www.biorxiv.org/content/biorxiv/early/2023/02/21/2023.02.19.529129.full.pdf |
| best_oa_location.version | acceptedVersion |
| best_oa_location.raw_type | posted-content |
| best_oa_location.license_id | https://openalex.org/licenses/cc-by-nc |
| best_oa_location.is_accepted | True |
| best_oa_location.is_published | False |
| best_oa_location.raw_source_name | |
| best_oa_location.landing_page_url | https://doi.org/10.1101/2023.02.19.529129 |
| primary_location.id | doi:10.1101/2023.02.19.529129 |
| primary_location.is_oa | True |
| primary_location.source.id | https://openalex.org/S4306402567 |
| primary_location.source.issn | |
| primary_location.source.type | repository |
| primary_location.source.is_oa | False |
| primary_location.source.issn_l | |
| primary_location.source.is_core | False |
| primary_location.source.is_in_doaj | False |
| primary_location.source.display_name | bioRxiv (Cold Spring Harbor Laboratory) |
| primary_location.source.host_organization | https://openalex.org/I2750212522 |
| primary_location.source.host_organization_name | Cold Spring Harbor Laboratory |
| primary_location.source.host_organization_lineage | https://openalex.org/I2750212522 |
| primary_location.license | cc-by-nc |
| primary_location.pdf_url | https://www.biorxiv.org/content/biorxiv/early/2023/02/21/2023.02.19.529129.full.pdf |
| primary_location.version | acceptedVersion |
| primary_location.raw_type | posted-content |
| primary_location.license_id | https://openalex.org/licenses/cc-by-nc |
| primary_location.is_accepted | True |
| primary_location.is_published | False |
| primary_location.raw_source_name | |
| primary_location.landing_page_url | https://doi.org/10.1101/2023.02.19.529129 |
| publication_date | 2023-02-21 |
| publication_year | 2023 |
| referenced_works | https://openalex.org/W2013501917, https://openalex.org/W2026062398, https://openalex.org/W2097734528, https://openalex.org/W2102384105, https://openalex.org/W1990456105, https://openalex.org/W2994528476, https://openalex.org/W2976793806, https://openalex.org/W2099221897, https://openalex.org/W2805453959, https://openalex.org/W4280615755, https://openalex.org/W2126833785, https://openalex.org/W1482160415, https://openalex.org/W2111884880, https://openalex.org/W3040842023, https://openalex.org/W2165460624, https://openalex.org/W2893042677, https://openalex.org/W2022035708, https://openalex.org/W3021581748, https://openalex.org/W2161444534, https://openalex.org/W2135611147, https://openalex.org/W1974883772, https://openalex.org/W2141913814, https://openalex.org/W2127779696, https://openalex.org/W2796242207, https://openalex.org/W3189492453, https://openalex.org/W3134450349, https://openalex.org/W2999136336, https://openalex.org/W2132578265, https://openalex.org/W4206151630, https://openalex.org/W2798191606, https://openalex.org/W2766641567, https://openalex.org/W4238870363, https://openalex.org/W2114876460, https://openalex.org/W2151062029, https://openalex.org/W2081488649, https://openalex.org/W2146386015, https://openalex.org/W4206033451, https://openalex.org/W2137678962, https://openalex.org/W4315476882, https://openalex.org/W2210604002, https://openalex.org/W1917701646, https://openalex.org/W4200071587, https://openalex.org/W2151409320, https://openalex.org/W2154518589, https://openalex.org/W2165778247, https://openalex.org/W1605984840, https://openalex.org/W100464641, https://openalex.org/W2161847290, https://openalex.org/W2991998196, https://openalex.org/W2126027501, https://openalex.org/W2794044768, https://openalex.org/W3008256015, https://openalex.org/W2109628725, https://openalex.org/W4242289937, https://openalex.org/W2898580681, https://openalex.org/W2513727910, https://openalex.org/W3101949891, https://openalex.org/W4399640412 |
| referenced_works_count | 58 |
| abstract_inverted_index.R | 96 |
| abstract_inverted_index.a | 29, 45, 98, 119 |
| abstract_inverted_index.It | 164 |
| abstract_inverted_index.We | 132 |
| abstract_inverted_index.an | 64 |
| abstract_inverted_index.as | 83, 85 |
| abstract_inverted_index.be | 44, 143 |
| abstract_inverted_index.by | 122 |
| abstract_inverted_index.in | 118, 204 |
| abstract_inverted_index.is | 63 |
| abstract_inverted_index.of | 14, 50, 56, 72, 100, 107, 127, 169 |
| abstract_inverted_index.on | 9, 153 |
| abstract_inverted_index.or | 111, 173 |
| abstract_inverted_index.to | 6, 47, 103, 115, 135, 150 |
| abstract_inverted_index.we | 92 |
| abstract_inverted_index.The | 145 |
| abstract_inverted_index.aid | 104 |
| abstract_inverted_index.and | 11, 61, 75, 156, 161, 186, 190, 192, 201 |
| abstract_inverted_index.are | 3, 39, 180 |
| abstract_inverted_index.can | 69, 142 |
| abstract_inverted_index.for | 124, 158 |
| abstract_inverted_index.may | 43 |
| abstract_inverted_index.new | 18 |
| abstract_inverted_index.not | 181 |
| abstract_inverted_index.one | 110 |
| abstract_inverted_index.set | 99 |
| abstract_inverted_index.the | 34, 48, 94, 105, 125, 137 |
| abstract_inverted_index.use | 24 |
| abstract_inverted_index.Here | 91 |
| abstract_inverted_index.also | 165 |
| abstract_inverted_index.been | 21 |
| abstract_inverted_index.data | 30, 79, 108, 117, 139, 152, 179, 188 |
| abstract_inverted_index.from | 33, 77, 109 |
| abstract_inverted_index.have | 20 |
| abstract_inverted_index.many | 112 |
| abstract_inverted_index.that | 23, 38, 68, 141 |
| abstract_inverted_index.used | 5 |
| abstract_inverted_index.well | 84 |
| abstract_inverted_index.when | 177 |
| abstract_inverted_index.will | 193 |
| abstract_inverted_index.about | 197 |
| abstract_inverted_index.model | 67 |
| abstract_inverted_index.rates | 71 |
| abstract_inverted_index.these | 51 |
| abstract_inverted_index.those | 89 |
| abstract_inverted_index.tools | 102 |
| abstract_inverted_index.trees | 2, 27, 37, 114 |
| abstract_inverted_index.types | 140 |
| abstract_inverted_index.under | 88 |
| abstract_inverted_index.used, | 41 |
| abstract_inverted_index.used. | 144 |
| abstract_inverted_index.which | 42 |
| abstract_inverted_index.DAISIE | 53, 123 |
| abstract_inverted_index.across | 80 |
| abstract_inverted_index.allows | 166 |
| abstract_inverted_index.answer | 7 |
| abstract_inverted_index.either | 170 |
| abstract_inverted_index.entire | 174 |
| abstract_inverted_index.format | 120 |
| abstract_inverted_index.island | 65, 128, 154, 198 |
| abstract_inverted_index.rates. | 90 |
| abstract_inverted_index.simple | 148 |
| abstract_inverted_index.single | 35 |
| abstract_inverted_index.Islands | 57 |
| abstract_inverted_index.account | 157 |
| abstract_inverted_index.barrier | 46 |
| abstract_inverted_index.enables | 184 |
| abstract_inverted_index.extract | 151 |
| abstract_inverted_index.groups. | 16 |
| abstract_inverted_index.impacts | 203 |
| abstract_inverted_index.insular | 81, 175, 205 |
| abstract_inverted_index.islands | 87 |
| abstract_inverted_index.missing | 171 |
| abstract_inverted_index.models. | 131 |
| abstract_inverted_index.package | 146 |
| abstract_inverted_index.present | 133 |
| abstract_inverted_index.species | 172 |
| abstract_inverted_index.through | 58 |
| abstract_inverted_index.various | 138 |
| abstract_inverted_index.(Dynamic | 54 |
| abstract_inverted_index.Abstract | 0 |
| abstract_inverted_index.Assembly | 55 |
| abstract_inverted_index.commonly | 4, 40 |
| abstract_inverted_index.describe | 93 |
| abstract_inverted_index.distinct | 32 |
| abstract_inverted_index.estimate | 70 |
| abstract_inverted_index.examples | 134 |
| abstract_inverted_index.flexible | 167 |
| abstract_inverted_index.generate | 116 |
| abstract_inverted_index.includes | 147 |
| abstract_inverted_index.lineages | 176 |
| abstract_inverted_index.package, | 97 |
| abstract_inverted_index.simulate | 86 |
| abstract_inverted_index.systems. | 206 |
| abstract_inverted_index.Recently, | 17 |
| abstract_inverted_index.colonists | 155 |
| abstract_inverted_index.community | 25 |
| abstract_inverted_index.developed | 22 |
| abstract_inverted_index.different | 15 |
| abstract_inverted_index.histories | 13 |
| abstract_inverted_index.inference | 130 |
| abstract_inverted_index.questions | 8, 196 |
| abstract_inverted_index.requiring | 28 |
| abstract_inverted_index.structure | 31 |
| abstract_inverted_index.taxonomic | 162 |
| abstract_inverted_index.DAISIEprep | 95, 183 |
| abstract_inverted_index.addressing | 195 |
| abstract_inverted_index.algorithms | 149 |
| abstract_inverted_index.approaches | 19 |
| abstract_inverted_index.available. | 182 |
| abstract_inverted_index.extinction | 76 |
| abstract_inverted_index.extraction | 106, 189 |
| abstract_inverted_index.illustrate | 136 |
| abstract_inverted_index.speciation | 74 |
| abstract_inverted_index.Extinction) | 62 |
| abstract_inverted_index.Immigration | 60 |
| abstract_inverted_index.Speciation, | 59 |
| abstract_inverted_index.application | 126 |
| abstract_inverted_index.approaches. | 52 |
| abstract_inverted_index.facili-tate | 194 |
| abstract_inverted_index.formatting, | 191 |
| abstract_inverted_index.topological | 160 |
| abstract_inverted_index.utilisation | 49 |
| abstract_inverted_index.Phylogenetic | 1 |
| abstract_inverted_index.biogeography | 66, 129 |
| abstract_inverted_index.communities, | 82 |
| abstract_inverted_index.phylogenetic | 26, 36, 78, 113, 178 |
| abstract_inverted_index.reproducible | 185 |
| abstract_inverted_index.uncertainty. | 163 |
| abstract_inverted_index.anthropogenic | 202 |
| abstract_inverted_index.biogeography, | 199 |
| abstract_inverted_index.colonisation, | 73 |
| abstract_inverted_index.incorporation | 168 |
| abstract_inverted_index.interpretable | 121 |
| abstract_inverted_index.user-friendly | 187 |
| abstract_inverted_index.pre-processing | 101 |
| abstract_inverted_index.biogeographical | 10 |
| abstract_inverted_index.diversification | 12, 200 |
| abstract_inverted_index.bio-geographical, | 159 |
| cited_by_percentile_year | |
| corresponding_author_ids | https://openalex.org/A5090325219 |
| countries_distinct_count | 1 |
| institutions_distinct_count | 5 |
| corresponding_institution_ids | https://openalex.org/I169381384 |
| sustainable_development_goals[0].id | https://metadata.un.org/sdg/14 |
| sustainable_development_goals[0].score | 0.550000011920929 |
| sustainable_development_goals[0].display_name | Life below water |
| citation_normalized_percentile.value | 0.0065652 |
| citation_normalized_percentile.is_in_top_1_percent | False |
| citation_normalized_percentile.is_in_top_10_percent | False |