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Data archive: CICT for single cell RNA-seq network inference
September 2023 • Shao‐shan Carol Huang, Abbas Shojaee
This archive contains benchmarking input data and results for using single cell gene expression data to infer gene regulatory networks (GRN) by the Causal Inference with Composition of Transactions (CICT) method and a selected set of published methods. This accompanies the manuscript "Robust discovery of gene regulatory networks from single-cell gene expression data by Causal Inference Using Composition of Transactions" (Shojaee and Huang, Brief in Bioinform 2023. DOI: 10.1093/bib/bbad370). The CICT code is availa…
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Computer Science
Computational Biology
Data Mining
Artificial Intelligence
Biology
Gene Expression
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