Data-driven quantitative modeling of bacterial active nematics Article Swipe
He Li
,
Xia-qing Shi
,
Mingji Huang
,
Xiaohong Chen
,
Minfeng Xiao
,
Chenli Liu
,
Hugues Chaté
,
Hepeng Zhang
·
YOU?
·
· 2018
· Open Access
·
· DOI: https://doi.org/10.1073/pnas.1812570116
YOU?
·
· 2018
· Open Access
·
· DOI: https://doi.org/10.1073/pnas.1812570116
Significance Active nematics are nonequilibrium fluids consisting of elongated units driven at the individual scale. They spontaneously exhibit complex spatiotemporal dynamics and have attracted the attention of scientists from many disciplines. Here, we introduce an experimental system (made of filamentous bacteria) and a type of microscopic model for active nematics. Simultaneous measurements of orientation and velocity fields yield comprehensive experimental data that can be used to identify optimal values for all important parameters in the model. At these optimal parameters, the model quantitatively reproduces all experimentally measured features. This, in turn, reveals key processes governing active nematics. Our versatile approach successfully combines quantitative experiments and data-driven modeling; it can be used to study other dense active systems.
Related Topics
Concepts
Metadata
- Type
- article
- Language
- en
- Landing Page
- https://doi.org/10.1073/pnas.1812570116
- OA Status
- green
- Cited By
- 138
- References
- 85
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W2907907032
All OpenAlex metadata
Raw OpenAlex JSON
- OpenAlex ID
-
https://openalex.org/W2907907032Canonical identifier for this work in OpenAlex
- DOI
-
https://doi.org/10.1073/pnas.1812570116Digital Object Identifier
- Title
-
Data-driven quantitative modeling of bacterial active nematicsWork title
- Type
-
articleOpenAlex work type
- Language
-
enPrimary language
- Publication year
-
2018Year of publication
- Publication date
-
2018-12-28Full publication date if available
- Authors
-
He Li, Xia-qing Shi, Mingji Huang, Xiaohong Chen, Minfeng Xiao, Chenli Liu, Hugues Chaté, Hepeng ZhangList of authors in order
- Landing page
-
https://doi.org/10.1073/pnas.1812570116Publisher landing page
- Open access
-
YesWhether a free full text is available
- OA status
-
greenOpen access status per OpenAlex
- OA URL
-
https://arxiv.org/pdf/2011.07894Direct OA link when available
- Concepts
-
Computer science, Biological system, BiologyTop concepts (fields/topics) attached by OpenAlex
- Cited by
-
138Total citation count in OpenAlex
- Citations by year (recent)
-
2025: 14, 2024: 28, 2023: 15, 2022: 17, 2021: 31Per-year citation counts (last 5 years)
- References (count)
-
85Number of works referenced by this work
- Related works (count)
-
10Other works algorithmically related by OpenAlex
Full payload
| id | https://openalex.org/W2907907032 |
|---|---|
| doi | https://doi.org/10.1073/pnas.1812570116 |
| ids.doi | https://doi.org/10.1073/pnas.1812570116 |
| ids.mag | 2907907032 |
| ids.pmid | https://pubmed.ncbi.nlm.nih.gov/30593562 |
| ids.openalex | https://openalex.org/W2907907032 |
| fwci | 9.99850261 |
| mesh[0].qualifier_ui | |
| mesh[0].descriptor_ui | D057446 |
| mesh[0].is_major_topic | True |
| mesh[0].qualifier_name | |
| mesh[0].descriptor_name | Hydrodynamics |
| mesh[1].qualifier_ui | |
| mesh[1].descriptor_ui | D008962 |
| mesh[1].is_major_topic | True |
| mesh[1].qualifier_name | |
| mesh[1].descriptor_name | Models, Theoretical |
| mesh[2].qualifier_ui | |
| mesh[2].descriptor_ui | D012706 |
| mesh[2].is_major_topic | False |
| mesh[2].qualifier_name | |
| mesh[2].descriptor_name | Serratia marcescens |
| mesh[3].qualifier_ui | |
| mesh[3].descriptor_ui | D057446 |
| mesh[3].is_major_topic | True |
| mesh[3].qualifier_name | |
| mesh[3].descriptor_name | Hydrodynamics |
| mesh[4].qualifier_ui | |
| mesh[4].descriptor_ui | D008962 |
| mesh[4].is_major_topic | True |
| mesh[4].qualifier_name | |
| mesh[4].descriptor_name | Models, Theoretical |
| mesh[5].qualifier_ui | |
| mesh[5].descriptor_ui | D012706 |
| mesh[5].is_major_topic | False |
| mesh[5].qualifier_name | |
| mesh[5].descriptor_name | Serratia marcescens |
| type | article |
| title | Data-driven quantitative modeling of bacterial active nematics |
| awards[0].id | https://openalex.org/G178774567 |
| awards[0].funder_id | https://openalex.org/F4320321001 |
| awards[0].display_name | |
| awards[0].funder_award_id | 11674236 |
| awards[0].funder_display_name | National Natural Science Foundation of China |
| biblio.issue | 3 |
| biblio.volume | 116 |
| biblio.last_page | 785 |
| biblio.first_page | 777 |
| topics[0].id | https://openalex.org/T11486 |
| topics[0].field.id | https://openalex.org/fields/31 |
| topics[0].field.display_name | Physics and Astronomy |
| topics[0].score | 1.0 |
| topics[0].domain.id | https://openalex.org/domains/3 |
| topics[0].domain.display_name | Physical Sciences |
| topics[0].subfield.id | https://openalex.org/subfields/3104 |
| topics[0].subfield.display_name | Condensed Matter Physics |
| topics[0].display_name | Micro and Nano Robotics |
| topics[1].id | https://openalex.org/T13052 |
| topics[1].field.id | https://openalex.org/fields/22 |
| topics[1].field.display_name | Engineering |
| topics[1].score | 0.994700014591217 |
| topics[1].domain.id | https://openalex.org/domains/3 |
| topics[1].domain.display_name | Physical Sciences |
| topics[1].subfield.id | https://openalex.org/subfields/2204 |
| topics[1].subfield.display_name | Biomedical Engineering |
| topics[1].display_name | Molecular Communication and Nanonetworks |
| topics[2].id | https://openalex.org/T12236 |
| topics[2].field.id | https://openalex.org/fields/28 |
| topics[2].field.display_name | Neuroscience |
| topics[2].score | 0.9896000027656555 |
| topics[2].domain.id | https://openalex.org/domains/1 |
| topics[2].domain.display_name | Life Sciences |
| topics[2].subfield.id | https://openalex.org/subfields/2804 |
| topics[2].subfield.display_name | Cellular and Molecular Neuroscience |
| topics[2].display_name | Photoreceptor and optogenetics research |
| funders[0].id | https://openalex.org/F4320321001 |
| funders[0].ror | https://ror.org/01h0zpd94 |
| funders[0].display_name | National Natural Science Foundation of China |
| is_xpac | False |
| apc_list | |
| apc_paid | |
| concepts[0].id | https://openalex.org/C41008148 |
| concepts[0].level | 0 |
| concepts[0].score | 0.35173043608665466 |
| concepts[0].wikidata | https://www.wikidata.org/wiki/Q21198 |
| concepts[0].display_name | Computer science |
| concepts[1].id | https://openalex.org/C186060115 |
| concepts[1].level | 1 |
| concepts[1].score | 0.3273465037345886 |
| concepts[1].wikidata | https://www.wikidata.org/wiki/Q30336093 |
| concepts[1].display_name | Biological system |
| concepts[2].id | https://openalex.org/C86803240 |
| concepts[2].level | 0 |
| concepts[2].score | 0.15330788493156433 |
| concepts[2].wikidata | https://www.wikidata.org/wiki/Q420 |
| concepts[2].display_name | Biology |
| keywords[0].id | https://openalex.org/keywords/computer-science |
| keywords[0].score | 0.35173043608665466 |
| keywords[0].display_name | Computer science |
| keywords[1].id | https://openalex.org/keywords/biological-system |
| keywords[1].score | 0.3273465037345886 |
| keywords[1].display_name | Biological system |
| keywords[2].id | https://openalex.org/keywords/biology |
| keywords[2].score | 0.15330788493156433 |
| keywords[2].display_name | Biology |
| language | en |
| locations[0].id | doi:10.1073/pnas.1812570116 |
| locations[0].is_oa | False |
| locations[0].source.id | https://openalex.org/S125754415 |
| locations[0].source.issn | 0027-8424, 1091-6490 |
| locations[0].source.type | journal |
| locations[0].source.is_oa | False |
| locations[0].source.issn_l | 0027-8424 |
| locations[0].source.is_core | True |
| locations[0].source.is_in_doaj | False |
| locations[0].source.display_name | Proceedings of the National Academy of Sciences |
| locations[0].source.host_organization | https://openalex.org/P4310320052 |
| locations[0].source.host_organization_name | National Academy of Sciences |
| locations[0].source.host_organization_lineage | https://openalex.org/P4310320052 |
| locations[0].source.host_organization_lineage_names | National Academy of Sciences |
| locations[0].license | |
| locations[0].pdf_url | |
| locations[0].version | publishedVersion |
| locations[0].raw_type | journal-article |
| locations[0].license_id | |
| locations[0].is_accepted | True |
| locations[0].is_published | True |
| locations[0].raw_source_name | Proceedings of the National Academy of Sciences |
| locations[0].landing_page_url | https://doi.org/10.1073/pnas.1812570116 |
| locations[1].id | pmid:30593562 |
| locations[1].is_oa | False |
| locations[1].source.id | https://openalex.org/S4306525036 |
| locations[1].source.issn | |
| locations[1].source.type | repository |
| locations[1].source.is_oa | False |
| locations[1].source.issn_l | |
| locations[1].source.is_core | False |
| locations[1].source.is_in_doaj | False |
| locations[1].source.display_name | PubMed |
| locations[1].source.host_organization | https://openalex.org/I1299303238 |
| locations[1].source.host_organization_name | National Institutes of Health |
| locations[1].source.host_organization_lineage | https://openalex.org/I1299303238 |
| locations[1].license | |
| locations[1].pdf_url | |
| locations[1].version | publishedVersion |
| locations[1].raw_type | |
| locations[1].license_id | |
| locations[1].is_accepted | True |
| locations[1].is_published | True |
| locations[1].raw_source_name | Proceedings of the National Academy of Sciences of the United States of America |
| locations[1].landing_page_url | https://pubmed.ncbi.nlm.nih.gov/30593562 |
| locations[2].id | pmh:oai:arXiv.org:2011.07894 |
| locations[2].is_oa | True |
| locations[2].source.id | https://openalex.org/S4306400194 |
| locations[2].source.issn | |
| locations[2].source.type | repository |
| locations[2].source.is_oa | True |
| locations[2].source.issn_l | |
| locations[2].source.is_core | False |
| locations[2].source.is_in_doaj | False |
| locations[2].source.display_name | arXiv (Cornell University) |
| locations[2].source.host_organization | https://openalex.org/I205783295 |
| locations[2].source.host_organization_name | Cornell University |
| locations[2].source.host_organization_lineage | https://openalex.org/I205783295 |
| locations[2].license | |
| locations[2].pdf_url | https://arxiv.org/pdf/2011.07894 |
| locations[2].version | submittedVersion |
| locations[2].raw_type | text |
| locations[2].license_id | |
| locations[2].is_accepted | False |
| locations[2].is_published | False |
| locations[2].raw_source_name | |
| locations[2].landing_page_url | http://arxiv.org/abs/2011.07894 |
| locations[3].id | pmh:oai:HAL:cea-04344800v1 |
| locations[3].is_oa | False |
| locations[3].source.id | https://openalex.org/S4306402512 |
| locations[3].source.issn | |
| locations[3].source.type | repository |
| locations[3].source.is_oa | False |
| locations[3].source.issn_l | |
| locations[3].source.is_core | False |
| locations[3].source.is_in_doaj | False |
| locations[3].source.display_name | HAL (Le Centre pour la Communication Scientifique Directe) |
| locations[3].source.host_organization | https://openalex.org/I1294671590 |
| locations[3].source.host_organization_name | Centre National de la Recherche Scientifique |
| locations[3].source.host_organization_lineage | https://openalex.org/I1294671590 |
| locations[3].license | |
| locations[3].pdf_url | |
| locations[3].version | submittedVersion |
| locations[3].raw_type | Journal articles |
| locations[3].license_id | |
| locations[3].is_accepted | False |
| locations[3].is_published | False |
| locations[3].raw_source_name | Proceedings of the National Academy of Sciences of the United States of America, 2018, 116 (3), pp.777-785. ⟨10.1073/pnas.1812570116⟩ |
| locations[3].landing_page_url | https://cea.hal.science/cea-04344800 |
| locations[4].id | pmh:oai:europepmc.org:5589307 |
| locations[4].is_oa | False |
| locations[4].source.id | https://openalex.org/S4306400806 |
| locations[4].source.issn | |
| locations[4].source.type | repository |
| locations[4].source.is_oa | False |
| locations[4].source.issn_l | |
| locations[4].source.is_core | False |
| locations[4].source.is_in_doaj | False |
| locations[4].source.display_name | Europe PMC (PubMed Central) |
| locations[4].source.host_organization | https://openalex.org/I1303153112 |
| locations[4].source.host_organization_name | European Bioinformatics Institute |
| locations[4].source.host_organization_lineage | https://openalex.org/I1303153112 |
| locations[4].license | |
| locations[4].pdf_url | |
| locations[4].version | submittedVersion |
| locations[4].raw_type | Text |
| locations[4].license_id | |
| locations[4].is_accepted | False |
| locations[4].is_published | False |
| locations[4].raw_source_name | |
| locations[4].landing_page_url | https://www.ncbi.nlm.nih.gov/pmc/articles/6338848 |
| indexed_in | arxiv, crossref, pubmed |
| authorships[0].author.id | https://openalex.org/A5100737882 |
| authorships[0].author.orcid | https://orcid.org/0000-0002-1611-1026 |
| authorships[0].author.display_name | He Li |
| authorships[0].countries | CN |
| authorships[0].affiliations[0].institution_ids | https://openalex.org/I183067930 |
| authorships[0].affiliations[0].raw_affiliation_string | Institute of Natural Sciences, Shanghai Jiao Tong University, Shanghai 200240, China; |
| authorships[0].affiliations[1].institution_ids | https://openalex.org/I183067930 |
| authorships[0].affiliations[1].raw_affiliation_string | School of Physics and Astronomy, Shanghai Jiao Tong University, Shanghai 200240, China; |
| authorships[0].institutions[0].id | https://openalex.org/I183067930 |
| authorships[0].institutions[0].ror | https://ror.org/0220qvk04 |
| authorships[0].institutions[0].type | education |
| authorships[0].institutions[0].lineage | https://openalex.org/I183067930 |
| authorships[0].institutions[0].country_code | CN |
| authorships[0].institutions[0].display_name | Shanghai Jiao Tong University |
| authorships[0].author_position | first |
| authorships[0].raw_author_name | He Li |
| authorships[0].is_corresponding | False |
| authorships[0].raw_affiliation_strings | Institute of Natural Sciences, Shanghai Jiao Tong University, Shanghai 200240, China;, School of Physics and Astronomy, Shanghai Jiao Tong University, Shanghai 200240, China; |
| authorships[1].author.id | https://openalex.org/A5082749429 |
| authorships[1].author.orcid | https://orcid.org/0000-0003-2180-3497 |
| authorships[1].author.display_name | Xia-qing Shi |
| authorships[1].countries | CN, FR |
| authorships[1].affiliations[0].institution_ids | https://openalex.org/I1294671590, https://openalex.org/I2738703131, https://openalex.org/I277688954, https://openalex.org/I4210115618, https://openalex.org/I4210128565 |
| authorships[1].affiliations[0].raw_affiliation_string | Service de Physique de l’Etat Condensé, Commissariat à l’Energie Atomique (CEA), CNRS, Université Paris-Saclay, CEA-Saclay, 91191 Gif-sur-Yvette, France; |
| authorships[1].affiliations[1].institution_ids | https://openalex.org/I3923682 |
| authorships[1].affiliations[1].raw_affiliation_string | Center for Soft Condensed Matter Physics and Interdisciplinary Research & School of Physical Science and Technology, Soochow University, Suzhou 215006, China; |
| authorships[1].institutions[0].id | https://openalex.org/I3923682 |
| authorships[1].institutions[0].ror | https://ror.org/05t8y2r12 |
| authorships[1].institutions[0].type | education |
| authorships[1].institutions[0].lineage | https://openalex.org/I3923682 |
| authorships[1].institutions[0].country_code | CN |
| authorships[1].institutions[0].display_name | Soochow University |
| authorships[1].institutions[1].id | https://openalex.org/I4210128565 |
| authorships[1].institutions[1].ror | https://ror.org/03n15ch10 |
| authorships[1].institutions[1].type | government |
| authorships[1].institutions[1].lineage | https://openalex.org/I2738703131, https://openalex.org/I277688954, https://openalex.org/I4210128565 |
| authorships[1].institutions[1].country_code | FR |
| authorships[1].institutions[1].display_name | CEA Paris-Saclay |
| authorships[1].institutions[2].id | https://openalex.org/I1294671590 |
| authorships[1].institutions[2].ror | https://ror.org/02feahw73 |
| authorships[1].institutions[2].type | government |
| authorships[1].institutions[2].lineage | https://openalex.org/I1294671590 |
| authorships[1].institutions[2].country_code | FR |
| authorships[1].institutions[2].display_name | Centre National de la Recherche Scientifique |
| authorships[1].institutions[3].id | https://openalex.org/I2738703131 |
| authorships[1].institutions[3].ror | https://ror.org/00jjx8s55 |
| authorships[1].institutions[3].type | government |
| authorships[1].institutions[3].lineage | https://openalex.org/I2738703131 |
| authorships[1].institutions[3].country_code | FR |
| authorships[1].institutions[3].display_name | Commissariat à l'Énergie Atomique et aux Énergies Alternatives |
| authorships[1].institutions[4].id | https://openalex.org/I4210115618 |
| authorships[1].institutions[4].ror | https://ror.org/0247p4w70 |
| authorships[1].institutions[4].type | facility |
| authorships[1].institutions[4].lineage | https://openalex.org/I1294671590, https://openalex.org/I1294671590, https://openalex.org/I2738703131, https://openalex.org/I2738703131, https://openalex.org/I4210091594, https://openalex.org/I4210098836, https://openalex.org/I4210113668, https://openalex.org/I4210115618 |
| authorships[1].institutions[4].country_code | FR |
| authorships[1].institutions[4].display_name | Service de Physique de l'État Condensé |
| authorships[1].institutions[5].id | https://openalex.org/I277688954 |
| authorships[1].institutions[5].ror | https://ror.org/03xjwb503 |
| authorships[1].institutions[5].type | education |
| authorships[1].institutions[5].lineage | https://openalex.org/I277688954 |
| authorships[1].institutions[5].country_code | FR |
| authorships[1].institutions[5].display_name | Université Paris-Saclay |
| authorships[1].author_position | middle |
| authorships[1].raw_author_name | Xia-qing Shi |
| authorships[1].is_corresponding | False |
| authorships[1].raw_affiliation_strings | Center for Soft Condensed Matter Physics and Interdisciplinary Research & School of Physical Science and Technology, Soochow University, Suzhou 215006, China;, Service de Physique de l’Etat Condensé, Commissariat à l’Energie Atomique (CEA), CNRS, Université Paris-Saclay, CEA-Saclay, 91191 Gif-sur-Yvette, France; |
| authorships[2].author.id | https://openalex.org/A5081049901 |
| authorships[2].author.orcid | https://orcid.org/0000-0002-7401-8049 |
| authorships[2].author.display_name | Mingji Huang |
| authorships[2].countries | CN |
| authorships[2].affiliations[0].institution_ids | https://openalex.org/I183067930 |
| authorships[2].affiliations[0].raw_affiliation_string | Institute of Natural Sciences, Shanghai Jiao Tong University, Shanghai 200240, China; |
| authorships[2].affiliations[1].institution_ids | https://openalex.org/I183067930 |
| authorships[2].affiliations[1].raw_affiliation_string | School of Physics and Astronomy, Shanghai Jiao Tong University, Shanghai 200240, China; |
| authorships[2].institutions[0].id | https://openalex.org/I183067930 |
| authorships[2].institutions[0].ror | https://ror.org/0220qvk04 |
| authorships[2].institutions[0].type | education |
| authorships[2].institutions[0].lineage | https://openalex.org/I183067930 |
| authorships[2].institutions[0].country_code | CN |
| authorships[2].institutions[0].display_name | Shanghai Jiao Tong University |
| authorships[2].author_position | middle |
| authorships[2].raw_author_name | Mingji Huang |
| authorships[2].is_corresponding | False |
| authorships[2].raw_affiliation_strings | Institute of Natural Sciences, Shanghai Jiao Tong University, Shanghai 200240, China;, School of Physics and Astronomy, Shanghai Jiao Tong University, Shanghai 200240, China; |
| authorships[3].author.id | https://openalex.org/A5100373745 |
| authorships[3].author.orcid | https://orcid.org/0000-0002-9797-8384 |
| authorships[3].author.display_name | Xiaohong Chen |
| authorships[3].countries | CN |
| authorships[3].affiliations[0].institution_ids | https://openalex.org/I183067930 |
| authorships[3].affiliations[0].raw_affiliation_string | Institute of Natural Sciences, Shanghai Jiao Tong University, Shanghai 200240, China; |
| authorships[3].affiliations[1].institution_ids | https://openalex.org/I183067930 |
| authorships[3].affiliations[1].raw_affiliation_string | School of Physics and Astronomy, Shanghai Jiao Tong University, Shanghai 200240, China; |
| authorships[3].institutions[0].id | https://openalex.org/I183067930 |
| authorships[3].institutions[0].ror | https://ror.org/0220qvk04 |
| authorships[3].institutions[0].type | education |
| authorships[3].institutions[0].lineage | https://openalex.org/I183067930 |
| authorships[3].institutions[0].country_code | CN |
| authorships[3].institutions[0].display_name | Shanghai Jiao Tong University |
| authorships[3].author_position | middle |
| authorships[3].raw_author_name | Xiao Chen |
| authorships[3].is_corresponding | False |
| authorships[3].raw_affiliation_strings | Institute of Natural Sciences, Shanghai Jiao Tong University, Shanghai 200240, China;, School of Physics and Astronomy, Shanghai Jiao Tong University, Shanghai 200240, China; |
| authorships[4].author.id | https://openalex.org/A5100412749 |
| authorships[4].author.orcid | https://orcid.org/0000-0002-0507-7352 |
| authorships[4].author.display_name | Minfeng Xiao |
| authorships[4].countries | CN |
| authorships[4].affiliations[0].institution_ids | https://openalex.org/I19820366, https://openalex.org/I4210145761 |
| authorships[4].affiliations[0].raw_affiliation_string | Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China; |
| authorships[4].institutions[0].id | https://openalex.org/I19820366 |
| authorships[4].institutions[0].ror | https://ror.org/034t30j35 |
| authorships[4].institutions[0].type | government |
| authorships[4].institutions[0].lineage | https://openalex.org/I19820366 |
| authorships[4].institutions[0].country_code | CN |
| authorships[4].institutions[0].display_name | Chinese Academy of Sciences |
| authorships[4].institutions[1].id | https://openalex.org/I4210145761 |
| authorships[4].institutions[1].ror | https://ror.org/04gh4er46 |
| authorships[4].institutions[1].type | facility |
| authorships[4].institutions[1].lineage | https://openalex.org/I19820366, https://openalex.org/I4210145761 |
| authorships[4].institutions[1].country_code | CN |
| authorships[4].institutions[1].display_name | Shenzhen Institutes of Advanced Technology |
| authorships[4].author_position | middle |
| authorships[4].raw_author_name | Minfeng Xiao |
| authorships[4].is_corresponding | False |
| authorships[4].raw_affiliation_strings | Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China; |
| authorships[5].author.id | https://openalex.org/A5058631201 |
| authorships[5].author.orcid | https://orcid.org/0000-0003-3029-7207 |
| authorships[5].author.display_name | Chenli Liu |
| authorships[5].countries | CN |
| authorships[5].affiliations[0].institution_ids | https://openalex.org/I19820366, https://openalex.org/I4210145761 |
| authorships[5].affiliations[0].raw_affiliation_string | Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China; |
| authorships[5].institutions[0].id | https://openalex.org/I19820366 |
| authorships[5].institutions[0].ror | https://ror.org/034t30j35 |
| authorships[5].institutions[0].type | government |
| authorships[5].institutions[0].lineage | https://openalex.org/I19820366 |
| authorships[5].institutions[0].country_code | CN |
| authorships[5].institutions[0].display_name | Chinese Academy of Sciences |
| authorships[5].institutions[1].id | https://openalex.org/I4210145761 |
| authorships[5].institutions[1].ror | https://ror.org/04gh4er46 |
| authorships[5].institutions[1].type | facility |
| authorships[5].institutions[1].lineage | https://openalex.org/I19820366, https://openalex.org/I4210145761 |
| authorships[5].institutions[1].country_code | CN |
| authorships[5].institutions[1].display_name | Shenzhen Institutes of Advanced Technology |
| authorships[5].author_position | middle |
| authorships[5].raw_author_name | Chenli Liu |
| authorships[5].is_corresponding | False |
| authorships[5].raw_affiliation_strings | Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China; |
| authorships[6].author.id | https://openalex.org/A5020073350 |
| authorships[6].author.orcid | https://orcid.org/0000-0002-6098-4094 |
| authorships[6].author.display_name | Hugues Chaté |
| authorships[6].countries | CN, FR |
| authorships[6].affiliations[0].institution_ids | https://openalex.org/I1294671590, https://openalex.org/I2738703131, https://openalex.org/I277688954, https://openalex.org/I4210115618, https://openalex.org/I4210128565 |
| authorships[6].affiliations[0].raw_affiliation_string | Service de Physique de l’Etat Condensé, Commissariat à l’Energie Atomique (CEA), CNRS, Université Paris-Saclay, CEA-Saclay, 91191 Gif-sur-Yvette, France; |
| authorships[6].affiliations[1].institution_ids | https://openalex.org/I4210139958 |
| authorships[6].affiliations[1].raw_affiliation_string | Computational Science Research Center, Beijing 100094, China; |
| authorships[6].institutions[0].id | https://openalex.org/I4210139958 |
| authorships[6].institutions[0].ror | https://ror.org/04tavf782 |
| authorships[6].institutions[0].type | facility |
| authorships[6].institutions[0].lineage | https://openalex.org/I4210139958 |
| authorships[6].institutions[0].country_code | CN |
| authorships[6].institutions[0].display_name | Beijing Computational Science Research Center |
| authorships[6].institutions[1].id | https://openalex.org/I4210128565 |
| authorships[6].institutions[1].ror | https://ror.org/03n15ch10 |
| authorships[6].institutions[1].type | government |
| authorships[6].institutions[1].lineage | https://openalex.org/I2738703131, https://openalex.org/I277688954, https://openalex.org/I4210128565 |
| authorships[6].institutions[1].country_code | FR |
| authorships[6].institutions[1].display_name | CEA Paris-Saclay |
| authorships[6].institutions[2].id | https://openalex.org/I1294671590 |
| authorships[6].institutions[2].ror | https://ror.org/02feahw73 |
| authorships[6].institutions[2].type | government |
| authorships[6].institutions[2].lineage | https://openalex.org/I1294671590 |
| authorships[6].institutions[2].country_code | FR |
| authorships[6].institutions[2].display_name | Centre National de la Recherche Scientifique |
| authorships[6].institutions[3].id | https://openalex.org/I2738703131 |
| authorships[6].institutions[3].ror | https://ror.org/00jjx8s55 |
| authorships[6].institutions[3].type | government |
| authorships[6].institutions[3].lineage | https://openalex.org/I2738703131 |
| authorships[6].institutions[3].country_code | FR |
| authorships[6].institutions[3].display_name | Commissariat à l'Énergie Atomique et aux Énergies Alternatives |
| authorships[6].institutions[4].id | https://openalex.org/I4210115618 |
| authorships[6].institutions[4].ror | https://ror.org/0247p4w70 |
| authorships[6].institutions[4].type | facility |
| authorships[6].institutions[4].lineage | https://openalex.org/I1294671590, https://openalex.org/I1294671590, https://openalex.org/I2738703131, https://openalex.org/I2738703131, https://openalex.org/I4210091594, https://openalex.org/I4210098836, https://openalex.org/I4210113668, https://openalex.org/I4210115618 |
| authorships[6].institutions[4].country_code | FR |
| authorships[6].institutions[4].display_name | Service de Physique de l'État Condensé |
| authorships[6].institutions[5].id | https://openalex.org/I277688954 |
| authorships[6].institutions[5].ror | https://ror.org/03xjwb503 |
| authorships[6].institutions[5].type | education |
| authorships[6].institutions[5].lineage | https://openalex.org/I277688954 |
| authorships[6].institutions[5].country_code | FR |
| authorships[6].institutions[5].display_name | Université Paris-Saclay |
| authorships[6].author_position | middle |
| authorships[6].raw_author_name | Hugues Chaté |
| authorships[6].is_corresponding | False |
| authorships[6].raw_affiliation_strings | Computational Science Research Center, Beijing 100094, China;, Service de Physique de l’Etat Condensé, Commissariat à l’Energie Atomique (CEA), CNRS, Université Paris-Saclay, CEA-Saclay, 91191 Gif-sur-Yvette, France; |
| authorships[7].author.id | https://openalex.org/A5061758260 |
| authorships[7].author.orcid | https://orcid.org/0000-0001-7806-407X |
| authorships[7].author.display_name | Hepeng Zhang |
| authorships[7].countries | CN |
| authorships[7].affiliations[0].institution_ids | https://openalex.org/I183067930 |
| authorships[7].affiliations[0].raw_affiliation_string | Institute of Natural Sciences, Shanghai Jiao Tong University, Shanghai 200240, China; |
| authorships[7].affiliations[1].institution_ids | https://openalex.org/I183067930 |
| authorships[7].affiliations[1].raw_affiliation_string | School of Physics and Astronomy, Shanghai Jiao Tong University, Shanghai 200240, China; |
| authorships[7].affiliations[2].institution_ids | https://openalex.org/I4210140493 |
| authorships[7].affiliations[2].raw_affiliation_string | Collaborative Innovation Center of Advanced Microstructures, Nanjing 210093, China |
| authorships[7].institutions[0].id | https://openalex.org/I4210140493 |
| authorships[7].institutions[0].ror | https://ror.org/04ttadj76 |
| authorships[7].institutions[0].type | facility |
| authorships[7].institutions[0].lineage | https://openalex.org/I126520041, https://openalex.org/I183067930, https://openalex.org/I19820366, https://openalex.org/I24943067, https://openalex.org/I2802624667, https://openalex.org/I4210140493, https://openalex.org/I76130692, https://openalex.org/I881766915 |
| authorships[7].institutions[0].country_code | CN |
| authorships[7].institutions[0].display_name | Collaborative Innovation Center of Advanced Microstructures |
| authorships[7].institutions[1].id | https://openalex.org/I183067930 |
| authorships[7].institutions[1].ror | https://ror.org/0220qvk04 |
| authorships[7].institutions[1].type | education |
| authorships[7].institutions[1].lineage | https://openalex.org/I183067930 |
| authorships[7].institutions[1].country_code | CN |
| authorships[7].institutions[1].display_name | Shanghai Jiao Tong University |
| authorships[7].author_position | last |
| authorships[7].raw_author_name | H. P. Zhang |
| authorships[7].is_corresponding | False |
| authorships[7].raw_affiliation_strings | Collaborative Innovation Center of Advanced Microstructures, Nanjing 210093, China, Institute of Natural Sciences, Shanghai Jiao Tong University, Shanghai 200240, China;, School of Physics and Astronomy, Shanghai Jiao Tong University, Shanghai 200240, China; |
| has_content.pdf | False |
| has_content.grobid_xml | False |
| is_paratext | False |
| open_access.is_oa | True |
| open_access.oa_url | https://arxiv.org/pdf/2011.07894 |
| open_access.oa_status | green |
| open_access.any_repository_has_fulltext | False |
| created_date | 2025-10-10T00:00:00 |
| display_name | Data-driven quantitative modeling of bacterial active nematics |
| has_fulltext | False |
| is_retracted | False |
| updated_date | 2025-11-06T03:46:38.306776 |
| primary_topic.id | https://openalex.org/T11486 |
| primary_topic.field.id | https://openalex.org/fields/31 |
| primary_topic.field.display_name | Physics and Astronomy |
| primary_topic.score | 1.0 |
| primary_topic.domain.id | https://openalex.org/domains/3 |
| primary_topic.domain.display_name | Physical Sciences |
| primary_topic.subfield.id | https://openalex.org/subfields/3104 |
| primary_topic.subfield.display_name | Condensed Matter Physics |
| primary_topic.display_name | Micro and Nano Robotics |
| related_works | https://openalex.org/W4391375266, https://openalex.org/W2899084033, https://openalex.org/W2748952813, https://openalex.org/W2390279801, https://openalex.org/W4391913857, https://openalex.org/W2358668433, https://openalex.org/W4396701345, https://openalex.org/W2376932109, https://openalex.org/W2001405890, https://openalex.org/W4396696052 |
| cited_by_count | 138 |
| counts_by_year[0].year | 2025 |
| counts_by_year[0].cited_by_count | 14 |
| counts_by_year[1].year | 2024 |
| counts_by_year[1].cited_by_count | 28 |
| counts_by_year[2].year | 2023 |
| counts_by_year[2].cited_by_count | 15 |
| counts_by_year[3].year | 2022 |
| counts_by_year[3].cited_by_count | 17 |
| counts_by_year[4].year | 2021 |
| counts_by_year[4].cited_by_count | 31 |
| counts_by_year[5].year | 2020 |
| counts_by_year[5].cited_by_count | 20 |
| counts_by_year[6].year | 2019 |
| counts_by_year[6].cited_by_count | 13 |
| locations_count | 5 |
| best_oa_location.id | pmh:oai:arXiv.org:2011.07894 |
| best_oa_location.is_oa | True |
| best_oa_location.source.id | https://openalex.org/S4306400194 |
| best_oa_location.source.issn | |
| best_oa_location.source.type | repository |
| best_oa_location.source.is_oa | True |
| best_oa_location.source.issn_l | |
| best_oa_location.source.is_core | False |
| best_oa_location.source.is_in_doaj | False |
| best_oa_location.source.display_name | arXiv (Cornell University) |
| best_oa_location.source.host_organization | https://openalex.org/I205783295 |
| best_oa_location.source.host_organization_name | Cornell University |
| best_oa_location.source.host_organization_lineage | https://openalex.org/I205783295 |
| best_oa_location.license | |
| best_oa_location.pdf_url | https://arxiv.org/pdf/2011.07894 |
| best_oa_location.version | submittedVersion |
| best_oa_location.raw_type | text |
| best_oa_location.license_id | |
| best_oa_location.is_accepted | False |
| best_oa_location.is_published | False |
| best_oa_location.raw_source_name | |
| best_oa_location.landing_page_url | http://arxiv.org/abs/2011.07894 |
| primary_location.id | doi:10.1073/pnas.1812570116 |
| primary_location.is_oa | False |
| primary_location.source.id | https://openalex.org/S125754415 |
| primary_location.source.issn | 0027-8424, 1091-6490 |
| primary_location.source.type | journal |
| primary_location.source.is_oa | False |
| primary_location.source.issn_l | 0027-8424 |
| primary_location.source.is_core | True |
| primary_location.source.is_in_doaj | False |
| primary_location.source.display_name | Proceedings of the National Academy of Sciences |
| primary_location.source.host_organization | https://openalex.org/P4310320052 |
| primary_location.source.host_organization_name | National Academy of Sciences |
| primary_location.source.host_organization_lineage | https://openalex.org/P4310320052 |
| primary_location.source.host_organization_lineage_names | National Academy of Sciences |
| primary_location.license | |
| primary_location.pdf_url | |
| primary_location.version | publishedVersion |
| primary_location.raw_type | journal-article |
| primary_location.license_id | |
| primary_location.is_accepted | True |
| primary_location.is_published | True |
| primary_location.raw_source_name | Proceedings of the National Academy of Sciences |
| primary_location.landing_page_url | https://doi.org/10.1073/pnas.1812570116 |
| publication_date | 2018-12-28 |
| publication_year | 2018 |
| referenced_works | https://openalex.org/W2134398909, https://openalex.org/W3037683188, https://openalex.org/W2074574519, https://openalex.org/W2304845716, https://openalex.org/W1904457290, https://openalex.org/W2738371553, https://openalex.org/W2044247492, https://openalex.org/W2163281958, https://openalex.org/W2097490641, https://openalex.org/W2098210520, https://openalex.org/W2220760808, https://openalex.org/W2123543343, https://openalex.org/W2011267504, https://openalex.org/W1981724556, https://openalex.org/W2336881770, https://openalex.org/W2582002895, https://openalex.org/W2218510376, https://openalex.org/W2963873576, https://openalex.org/W2044371211, https://openalex.org/W2005751229, https://openalex.org/W2056707942, https://openalex.org/W1997445226, https://openalex.org/W2233628497, https://openalex.org/W2603959930, https://openalex.org/W2592312290, https://openalex.org/W2766185013, https://openalex.org/W1999116645, https://openalex.org/W2468824508, https://openalex.org/W2094949149, https://openalex.org/W2042898119, https://openalex.org/W1991399233, https://openalex.org/W2020158707, https://openalex.org/W2016746146, https://openalex.org/W1984966278, https://openalex.org/W2084833850, https://openalex.org/W2055276703, https://openalex.org/W2051119902, https://openalex.org/W2238188827, https://openalex.org/W2520869106, https://openalex.org/W2606063864, https://openalex.org/W2606454966, https://openalex.org/W2311971106, https://openalex.org/W1780327926, https://openalex.org/W2080792487, https://openalex.org/W2039208311, https://openalex.org/W2059667163, https://openalex.org/W2077002577, https://openalex.org/W1598210494, https://openalex.org/W2074857461, https://openalex.org/W1992084946, https://openalex.org/W2129727322, https://openalex.org/W2007733767, https://openalex.org/W2147651187, https://openalex.org/W1991163811, https://openalex.org/W2592727748, https://openalex.org/W2310292589, https://openalex.org/W1956368500, https://openalex.org/W2061923613, https://openalex.org/W1970802205, https://openalex.org/W2173891626, https://openalex.org/W2754794516, https://openalex.org/W2340194477, https://openalex.org/W2554468600, https://openalex.org/W2287871111, https://openalex.org/W4211209035, https://openalex.org/W1973945478, https://openalex.org/W2227661501, https://openalex.org/W2519009324, https://openalex.org/W2474134685, https://openalex.org/W2032325704, https://openalex.org/W2015410655, https://openalex.org/W2094971551, https://openalex.org/W2896842174, https://openalex.org/W3103056651, https://openalex.org/W2963770701, https://openalex.org/W3104310224, https://openalex.org/W3106185196, https://openalex.org/W3099285974, https://openalex.org/W3103812248, https://openalex.org/W4252081754, https://openalex.org/W3098538684, https://openalex.org/W3099258063, https://openalex.org/W2341378690, https://openalex.org/W3103941069, https://openalex.org/W3098231892 |
| referenced_works_count | 85 |
| abstract_inverted_index.a | 42 |
| abstract_inverted_index.At | 76 |
| abstract_inverted_index.an | 34 |
| abstract_inverted_index.at | 11 |
| abstract_inverted_index.be | 63, 109 |
| abstract_inverted_index.in | 73, 89 |
| abstract_inverted_index.it | 107 |
| abstract_inverted_index.of | 7, 26, 38, 44, 52 |
| abstract_inverted_index.to | 65, 111 |
| abstract_inverted_index.we | 32 |
| abstract_inverted_index.Our | 97 |
| abstract_inverted_index.all | 70, 84 |
| abstract_inverted_index.and | 21, 41, 54, 104 |
| abstract_inverted_index.are | 3 |
| abstract_inverted_index.can | 62, 108 |
| abstract_inverted_index.for | 47, 69 |
| abstract_inverted_index.key | 92 |
| abstract_inverted_index.the | 12, 24, 74, 80 |
| abstract_inverted_index.They | 15 |
| abstract_inverted_index.data | 60 |
| abstract_inverted_index.from | 28 |
| abstract_inverted_index.have | 22 |
| abstract_inverted_index.many | 29 |
| abstract_inverted_index.that | 61 |
| abstract_inverted_index.type | 43 |
| abstract_inverted_index.used | 64, 110 |
| abstract_inverted_index.(made | 37 |
| abstract_inverted_index.Here, | 31 |
| abstract_inverted_index.This, | 88 |
| abstract_inverted_index.dense | 114 |
| abstract_inverted_index.model | 46, 81 |
| abstract_inverted_index.other | 113 |
| abstract_inverted_index.study | 112 |
| abstract_inverted_index.these | 77 |
| abstract_inverted_index.turn, | 90 |
| abstract_inverted_index.units | 9 |
| abstract_inverted_index.yield | 57 |
| abstract_inverted_index.Active | 1 |
| abstract_inverted_index.active | 48, 95, 115 |
| abstract_inverted_index.driven | 10 |
| abstract_inverted_index.fields | 56 |
| abstract_inverted_index.fluids | 5 |
| abstract_inverted_index.model. | 75 |
| abstract_inverted_index.scale. | 14 |
| abstract_inverted_index.system | 36 |
| abstract_inverted_index.values | 68 |
| abstract_inverted_index.complex | 18 |
| abstract_inverted_index.exhibit | 17 |
| abstract_inverted_index.optimal | 67, 78 |
| abstract_inverted_index.reveals | 91 |
| abstract_inverted_index.approach | 99 |
| abstract_inverted_index.combines | 101 |
| abstract_inverted_index.dynamics | 20 |
| abstract_inverted_index.identify | 66 |
| abstract_inverted_index.measured | 86 |
| abstract_inverted_index.nematics | 2 |
| abstract_inverted_index.systems. | 116 |
| abstract_inverted_index.velocity | 55 |
| abstract_inverted_index.attention | 25 |
| abstract_inverted_index.attracted | 23 |
| abstract_inverted_index.bacteria) | 40 |
| abstract_inverted_index.elongated | 8 |
| abstract_inverted_index.features. | 87 |
| abstract_inverted_index.governing | 94 |
| abstract_inverted_index.important | 71 |
| abstract_inverted_index.introduce | 33 |
| abstract_inverted_index.modeling; | 106 |
| abstract_inverted_index.nematics. | 49, 96 |
| abstract_inverted_index.processes | 93 |
| abstract_inverted_index.versatile | 98 |
| abstract_inverted_index.consisting | 6 |
| abstract_inverted_index.individual | 13 |
| abstract_inverted_index.parameters | 72 |
| abstract_inverted_index.reproduces | 83 |
| abstract_inverted_index.scientists | 27 |
| abstract_inverted_index.data-driven | 105 |
| abstract_inverted_index.experiments | 103 |
| abstract_inverted_index.filamentous | 39 |
| abstract_inverted_index.microscopic | 45 |
| abstract_inverted_index.orientation | 53 |
| abstract_inverted_index.parameters, | 79 |
| abstract_inverted_index.Significance | 0 |
| abstract_inverted_index.Simultaneous | 50 |
| abstract_inverted_index.disciplines. | 30 |
| abstract_inverted_index.experimental | 35, 59 |
| abstract_inverted_index.measurements | 51 |
| abstract_inverted_index.quantitative | 102 |
| abstract_inverted_index.successfully | 100 |
| abstract_inverted_index.comprehensive | 58 |
| abstract_inverted_index.spontaneously | 16 |
| abstract_inverted_index.experimentally | 85 |
| abstract_inverted_index.nonequilibrium | 4 |
| abstract_inverted_index.quantitatively | 82 |
| abstract_inverted_index.spatiotemporal | 19 |
| cited_by_percentile_year.max | 100 |
| cited_by_percentile_year.min | 99 |
| countries_distinct_count | 2 |
| institutions_distinct_count | 8 |
| citation_normalized_percentile.value | 0.991464 |
| citation_normalized_percentile.is_in_top_1_percent | True |
| citation_normalized_percentile.is_in_top_10_percent | True |