Database Bias in the Detection of Interdomain Horizontal Gene Transfer Events in Pezizomycotina Article Swipe
Kevin Aguirre-Carvajal
,
Cristian R. Munteanu
,
Vinicio Armijos‐Jaramillo
·
YOU?
·
· 2024
· Open Access
·
· DOI: https://doi.org/10.3390/biology13070469
YOU?
·
· 2024
· Open Access
·
· DOI: https://doi.org/10.3390/biology13070469
Horizontal gene transfer (HGT) is a widely acknowledged phenomenon in prokaryotes for generating genetic diversity. However, the impact of this process in eukaryotes, particularly interdomain HGT, is a topic of debate. Although there have been observed biases in interdomain HGT detection, little exploration has been conducted on the effects of imbalanced databases. In our study, we conducted experiments to assess how different databases affect the detection of interdomain HGT using proteomes from the Pezizomycotina fungal subphylum as our focus group. Our objective was to simulate the database imbalance commonly found in public biological databases, where bacterial and eukaryotic sequences are unevenly represented, and demonstrate that an increase in uploaded eukaryotic sequences leads to a decrease in predicted HGTs. For our experiments, four databases with varying proportions of eukaryotic sequences but consistent proportions of bacterial sequences were utilized. We observed a significant reduction in detected interdomain HGT candidates as the proportion of eukaryotes increased within the database. Our data suggest that the imbalance in databases bias the interdomain HGT detection and highlights challenges associated with confirming the presence of interdomain HGT among Pezizomycotina fungi and potentially other groups within Eukarya.
Related Topics
Concepts
Horizontal gene transfer
Biology
Database
Gene
Genetics
Prokaryote
Evolutionary biology
Phylogenetics
Computer science
Metadata
- Type
- article
- Language
- en
- Landing Page
- https://doi.org/10.3390/biology13070469
- https://www.mdpi.com/2079-7737/13/7/469/pdf?version=1719385243
- OA Status
- gold
- Cited By
- 1
- References
- 34
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W4400040133
All OpenAlex metadata
Raw OpenAlex JSON
- OpenAlex ID
-
https://openalex.org/W4400040133Canonical identifier for this work in OpenAlex
- DOI
-
https://doi.org/10.3390/biology13070469Digital Object Identifier
- Title
-
Database Bias in the Detection of Interdomain Horizontal Gene Transfer Events in PezizomycotinaWork title
- Type
-
articleOpenAlex work type
- Language
-
enPrimary language
- Publication year
-
2024Year of publication
- Publication date
-
2024-06-26Full publication date if available
- Authors
-
Kevin Aguirre-Carvajal, Cristian R. Munteanu, Vinicio Armijos‐JaramilloList of authors in order
- Landing page
-
https://doi.org/10.3390/biology13070469Publisher landing page
- PDF URL
-
https://www.mdpi.com/2079-7737/13/7/469/pdf?version=1719385243Direct link to full text PDF
- Open access
-
YesWhether a free full text is available
- OA status
-
goldOpen access status per OpenAlex
- OA URL
-
https://www.mdpi.com/2079-7737/13/7/469/pdf?version=1719385243Direct OA link when available
- Concepts
-
Horizontal gene transfer, Biology, Database, Gene, Genetics, Prokaryote, Evolutionary biology, Phylogenetics, Computer scienceTop concepts (fields/topics) attached by OpenAlex
- Cited by
-
1Total citation count in OpenAlex
- Citations by year (recent)
-
2025: 1Per-year citation counts (last 5 years)
- References (count)
-
34Number of works referenced by this work
- Related works (count)
-
10Other works algorithmically related by OpenAlex
Full payload
| id | https://openalex.org/W4400040133 |
|---|---|
| doi | https://doi.org/10.3390/biology13070469 |
| ids.doi | https://doi.org/10.3390/biology13070469 |
| ids.pmid | https://pubmed.ncbi.nlm.nih.gov/39056664 |
| ids.openalex | https://openalex.org/W4400040133 |
| fwci | 0.48024723 |
| type | article |
| title | Database Bias in the Detection of Interdomain Horizontal Gene Transfer Events in Pezizomycotina |
| biblio.issue | 7 |
| biblio.volume | 13 |
| biblio.last_page | 469 |
| biblio.first_page | 469 |
| topics[0].id | https://openalex.org/T10015 |
| topics[0].field.id | https://openalex.org/fields/13 |
| topics[0].field.display_name | Biochemistry, Genetics and Molecular Biology |
| topics[0].score | 0.9993000030517578 |
| topics[0].domain.id | https://openalex.org/domains/1 |
| topics[0].domain.display_name | Life Sciences |
| topics[0].subfield.id | https://openalex.org/subfields/1312 |
| topics[0].subfield.display_name | Molecular Biology |
| topics[0].display_name | Genomics and Phylogenetic Studies |
| topics[1].id | https://openalex.org/T10825 |
| topics[1].field.id | https://openalex.org/fields/13 |
| topics[1].field.display_name | Biochemistry, Genetics and Molecular Biology |
| topics[1].score | 0.9968000054359436 |
| topics[1].domain.id | https://openalex.org/domains/1 |
| topics[1].domain.display_name | Life Sciences |
| topics[1].subfield.id | https://openalex.org/subfields/1307 |
| topics[1].subfield.display_name | Cell Biology |
| topics[1].display_name | Plant Pathogens and Fungal Diseases |
| topics[2].id | https://openalex.org/T11879 |
| topics[2].field.id | https://openalex.org/fields/13 |
| topics[2].field.display_name | Biochemistry, Genetics and Molecular Biology |
| topics[2].score | 0.9936000108718872 |
| topics[2].domain.id | https://openalex.org/domains/1 |
| topics[2].domain.display_name | Life Sciences |
| topics[2].subfield.id | https://openalex.org/subfields/1312 |
| topics[2].subfield.display_name | Molecular Biology |
| topics[2].display_name | Protist diversity and phylogeny |
| is_xpac | False |
| apc_list.value | 2000 |
| apc_list.currency | CHF |
| apc_list.value_usd | 2165 |
| apc_paid.value | 2000 |
| apc_paid.currency | CHF |
| apc_paid.value_usd | 2165 |
| concepts[0].id | https://openalex.org/C92938381 |
| concepts[0].level | 4 |
| concepts[0].score | 0.8145864009857178 |
| concepts[0].wikidata | https://www.wikidata.org/wiki/Q83185 |
| concepts[0].display_name | Horizontal gene transfer |
| concepts[1].id | https://openalex.org/C86803240 |
| concepts[1].level | 0 |
| concepts[1].score | 0.7846102714538574 |
| concepts[1].wikidata | https://www.wikidata.org/wiki/Q420 |
| concepts[1].display_name | Biology |
| concepts[2].id | https://openalex.org/C77088390 |
| concepts[2].level | 1 |
| concepts[2].score | 0.6827166676521301 |
| concepts[2].wikidata | https://www.wikidata.org/wiki/Q8513 |
| concepts[2].display_name | Database |
| concepts[3].id | https://openalex.org/C104317684 |
| concepts[3].level | 2 |
| concepts[3].score | 0.475685715675354 |
| concepts[3].wikidata | https://www.wikidata.org/wiki/Q7187 |
| concepts[3].display_name | Gene |
| concepts[4].id | https://openalex.org/C54355233 |
| concepts[4].level | 1 |
| concepts[4].score | 0.4323945641517639 |
| concepts[4].wikidata | https://www.wikidata.org/wiki/Q7162 |
| concepts[4].display_name | Genetics |
| concepts[5].id | https://openalex.org/C2780918051 |
| concepts[5].level | 3 |
| concepts[5].score | 0.4152725636959076 |
| concepts[5].wikidata | https://www.wikidata.org/wiki/Q19081 |
| concepts[5].display_name | Prokaryote |
| concepts[6].id | https://openalex.org/C78458016 |
| concepts[6].level | 1 |
| concepts[6].score | 0.33031782507896423 |
| concepts[6].wikidata | https://www.wikidata.org/wiki/Q840400 |
| concepts[6].display_name | Evolutionary biology |
| concepts[7].id | https://openalex.org/C90132467 |
| concepts[7].level | 3 |
| concepts[7].score | 0.3162935972213745 |
| concepts[7].wikidata | https://www.wikidata.org/wiki/Q171184 |
| concepts[7].display_name | Phylogenetics |
| concepts[8].id | https://openalex.org/C41008148 |
| concepts[8].level | 0 |
| concepts[8].score | 0.07123509049415588 |
| concepts[8].wikidata | https://www.wikidata.org/wiki/Q21198 |
| concepts[8].display_name | Computer science |
| keywords[0].id | https://openalex.org/keywords/horizontal-gene-transfer |
| keywords[0].score | 0.8145864009857178 |
| keywords[0].display_name | Horizontal gene transfer |
| keywords[1].id | https://openalex.org/keywords/biology |
| keywords[1].score | 0.7846102714538574 |
| keywords[1].display_name | Biology |
| keywords[2].id | https://openalex.org/keywords/database |
| keywords[2].score | 0.6827166676521301 |
| keywords[2].display_name | Database |
| keywords[3].id | https://openalex.org/keywords/gene |
| keywords[3].score | 0.475685715675354 |
| keywords[3].display_name | Gene |
| keywords[4].id | https://openalex.org/keywords/genetics |
| keywords[4].score | 0.4323945641517639 |
| keywords[4].display_name | Genetics |
| keywords[5].id | https://openalex.org/keywords/prokaryote |
| keywords[5].score | 0.4152725636959076 |
| keywords[5].display_name | Prokaryote |
| keywords[6].id | https://openalex.org/keywords/evolutionary-biology |
| keywords[6].score | 0.33031782507896423 |
| keywords[6].display_name | Evolutionary biology |
| keywords[7].id | https://openalex.org/keywords/phylogenetics |
| keywords[7].score | 0.3162935972213745 |
| keywords[7].display_name | Phylogenetics |
| keywords[8].id | https://openalex.org/keywords/computer-science |
| keywords[8].score | 0.07123509049415588 |
| keywords[8].display_name | Computer science |
| language | en |
| locations[0].id | doi:10.3390/biology13070469 |
| locations[0].is_oa | True |
| locations[0].source.id | https://openalex.org/S153489431 |
| locations[0].source.issn | 2079-7737 |
| locations[0].source.type | journal |
| locations[0].source.is_oa | True |
| locations[0].source.issn_l | 2079-7737 |
| locations[0].source.is_core | True |
| locations[0].source.is_in_doaj | True |
| locations[0].source.display_name | Biology |
| locations[0].source.host_organization | https://openalex.org/P4310310987 |
| locations[0].source.host_organization_name | Multidisciplinary Digital Publishing Institute |
| locations[0].source.host_organization_lineage | https://openalex.org/P4310310987 |
| locations[0].source.host_organization_lineage_names | Multidisciplinary Digital Publishing Institute |
| locations[0].license | cc-by |
| locations[0].pdf_url | https://www.mdpi.com/2079-7737/13/7/469/pdf?version=1719385243 |
| locations[0].version | publishedVersion |
| locations[0].raw_type | journal-article |
| locations[0].license_id | https://openalex.org/licenses/cc-by |
| locations[0].is_accepted | True |
| locations[0].is_published | True |
| locations[0].raw_source_name | Biology |
| locations[0].landing_page_url | https://doi.org/10.3390/biology13070469 |
| locations[1].id | pmid:39056664 |
| locations[1].is_oa | False |
| locations[1].source.id | https://openalex.org/S4306525036 |
| locations[1].source.issn | |
| locations[1].source.type | repository |
| locations[1].source.is_oa | False |
| locations[1].source.issn_l | |
| locations[1].source.is_core | False |
| locations[1].source.is_in_doaj | False |
| locations[1].source.display_name | PubMed |
| locations[1].source.host_organization | https://openalex.org/I1299303238 |
| locations[1].source.host_organization_name | National Institutes of Health |
| locations[1].source.host_organization_lineage | https://openalex.org/I1299303238 |
| locations[1].license | |
| locations[1].pdf_url | |
| locations[1].version | publishedVersion |
| locations[1].raw_type | |
| locations[1].license_id | |
| locations[1].is_accepted | True |
| locations[1].is_published | True |
| locations[1].raw_source_name | Biology |
| locations[1].landing_page_url | https://pubmed.ncbi.nlm.nih.gov/39056664 |
| locations[2].id | pmh:oai:doaj.org/article:30193336f4f54317b106708898202e32 |
| locations[2].is_oa | False |
| locations[2].source.id | https://openalex.org/S4306401280 |
| locations[2].source.issn | |
| locations[2].source.type | repository |
| locations[2].source.is_oa | False |
| locations[2].source.issn_l | |
| locations[2].source.is_core | False |
| locations[2].source.is_in_doaj | False |
| locations[2].source.display_name | DOAJ (DOAJ: Directory of Open Access Journals) |
| locations[2].source.host_organization | |
| locations[2].source.host_organization_name | |
| locations[2].license | |
| locations[2].pdf_url | |
| locations[2].version | submittedVersion |
| locations[2].raw_type | article |
| locations[2].license_id | |
| locations[2].is_accepted | False |
| locations[2].is_published | False |
| locations[2].raw_source_name | Biology, Vol 13, Iss 7, p 469 (2024) |
| locations[2].landing_page_url | https://doaj.org/article/30193336f4f54317b106708898202e32 |
| locations[3].id | pmh:oai:pubmedcentral.nih.gov:11273514 |
| locations[3].is_oa | True |
| locations[3].source.id | https://openalex.org/S2764455111 |
| locations[3].source.issn | |
| locations[3].source.type | repository |
| locations[3].source.is_oa | False |
| locations[3].source.issn_l | |
| locations[3].source.is_core | False |
| locations[3].source.is_in_doaj | False |
| locations[3].source.display_name | PubMed Central |
| locations[3].source.host_organization | https://openalex.org/I1299303238 |
| locations[3].source.host_organization_name | National Institutes of Health |
| locations[3].source.host_organization_lineage | https://openalex.org/I1299303238 |
| locations[3].license | other-oa |
| locations[3].pdf_url | |
| locations[3].version | submittedVersion |
| locations[3].raw_type | Text |
| locations[3].license_id | https://openalex.org/licenses/other-oa |
| locations[3].is_accepted | False |
| locations[3].is_published | False |
| locations[3].raw_source_name | Biology (Basel) |
| locations[3].landing_page_url | https://www.ncbi.nlm.nih.gov/pmc/articles/11273514 |
| indexed_in | crossref, doaj, pubmed |
| authorships[0].author.id | https://openalex.org/A5098775299 |
| authorships[0].author.orcid | https://orcid.org/0009-0004-5143-6856 |
| authorships[0].author.display_name | Kevin Aguirre-Carvajal |
| authorships[0].countries | EC, ES |
| authorships[0].affiliations[0].institution_ids | https://openalex.org/I4210102282 |
| authorships[0].affiliations[0].raw_affiliation_string | Bio-Cheminformatics Research Group, Universidad de Las Américas, Quito 170513, Ecuador |
| authorships[0].affiliations[1].institution_ids | https://openalex.org/I11019714 |
| authorships[0].affiliations[1].raw_affiliation_string | Department of Computer Science and Information Technologies, Faculty of Computer Science, University of A Coruña, Campus Elviña s/n, 15071 Coruña, Spain |
| authorships[0].institutions[0].id | https://openalex.org/I4210102282 |
| authorships[0].institutions[0].ror | https://ror.org/0198j4566 |
| authorships[0].institutions[0].type | education |
| authorships[0].institutions[0].lineage | https://openalex.org/I4210102282 |
| authorships[0].institutions[0].country_code | EC |
| authorships[0].institutions[0].display_name | Universidad de Las Américas |
| authorships[0].institutions[1].id | https://openalex.org/I11019714 |
| authorships[0].institutions[1].ror | https://ror.org/01qckj285 |
| authorships[0].institutions[1].type | education |
| authorships[0].institutions[1].lineage | https://openalex.org/I11019714 |
| authorships[0].institutions[1].country_code | ES |
| authorships[0].institutions[1].display_name | Universidade da Coruña |
| authorships[0].author_position | first |
| authorships[0].raw_author_name | Kevin Aguirre-Carvajal |
| authorships[0].is_corresponding | False |
| authorships[0].raw_affiliation_strings | Bio-Cheminformatics Research Group, Universidad de Las Américas, Quito 170513, Ecuador, Department of Computer Science and Information Technologies, Faculty of Computer Science, University of A Coruña, Campus Elviña s/n, 15071 Coruña, Spain |
| authorships[1].author.id | https://openalex.org/A5058919066 |
| authorships[1].author.orcid | https://orcid.org/0000-0002-5628-2268 |
| authorships[1].author.display_name | Cristian R. Munteanu |
| authorships[1].countries | ES |
| authorships[1].affiliations[0].institution_ids | https://openalex.org/I11019714 |
| authorships[1].affiliations[0].raw_affiliation_string | Department of Computer Science and Information Technologies, Faculty of Computer Science, University of A Coruña, Campus Elviña s/n, 15071 Coruña, Spain |
| authorships[1].institutions[0].id | https://openalex.org/I11019714 |
| authorships[1].institutions[0].ror | https://ror.org/01qckj285 |
| authorships[1].institutions[0].type | education |
| authorships[1].institutions[0].lineage | https://openalex.org/I11019714 |
| authorships[1].institutions[0].country_code | ES |
| authorships[1].institutions[0].display_name | Universidade da Coruña |
| authorships[1].author_position | middle |
| authorships[1].raw_author_name | Cristian R. Munteanu |
| authorships[1].is_corresponding | False |
| authorships[1].raw_affiliation_strings | Department of Computer Science and Information Technologies, Faculty of Computer Science, University of A Coruña, Campus Elviña s/n, 15071 Coruña, Spain |
| authorships[2].author.id | https://openalex.org/A5001965047 |
| authorships[2].author.orcid | https://orcid.org/0000-0003-2965-2515 |
| authorships[2].author.display_name | Vinicio Armijos‐Jaramillo |
| authorships[2].countries | EC |
| authorships[2].affiliations[0].institution_ids | https://openalex.org/I4210102282 |
| authorships[2].affiliations[0].raw_affiliation_string | Carrera de Ingeniería en Biotecnología, Facultad de Ingeniería y Ciencias Aplicadas, Universidad de Las Américas, Quito 170513, Ecuador |
| authorships[2].institutions[0].id | https://openalex.org/I4210102282 |
| authorships[2].institutions[0].ror | https://ror.org/0198j4566 |
| authorships[2].institutions[0].type | education |
| authorships[2].institutions[0].lineage | https://openalex.org/I4210102282 |
| authorships[2].institutions[0].country_code | EC |
| authorships[2].institutions[0].display_name | Universidad de Las Américas |
| authorships[2].author_position | last |
| authorships[2].raw_author_name | Vinicio Armijos-Jaramillo |
| authorships[2].is_corresponding | True |
| authorships[2].raw_affiliation_strings | Carrera de Ingeniería en Biotecnología, Facultad de Ingeniería y Ciencias Aplicadas, Universidad de Las Américas, Quito 170513, Ecuador |
| has_content.pdf | True |
| has_content.grobid_xml | False |
| is_paratext | False |
| open_access.is_oa | True |
| open_access.oa_url | https://www.mdpi.com/2079-7737/13/7/469/pdf?version=1719385243 |
| open_access.oa_status | gold |
| open_access.any_repository_has_fulltext | False |
| created_date | 2025-10-10T00:00:00 |
| display_name | Database Bias in the Detection of Interdomain Horizontal Gene Transfer Events in Pezizomycotina |
| has_fulltext | False |
| is_retracted | False |
| updated_date | 2025-11-06T03:46:38.306776 |
| primary_topic.id | https://openalex.org/T10015 |
| primary_topic.field.id | https://openalex.org/fields/13 |
| primary_topic.field.display_name | Biochemistry, Genetics and Molecular Biology |
| primary_topic.score | 0.9993000030517578 |
| primary_topic.domain.id | https://openalex.org/domains/1 |
| primary_topic.domain.display_name | Life Sciences |
| primary_topic.subfield.id | https://openalex.org/subfields/1312 |
| primary_topic.subfield.display_name | Molecular Biology |
| primary_topic.display_name | Genomics and Phylogenetic Studies |
| related_works | https://openalex.org/W2061375526, https://openalex.org/W2793602347, https://openalex.org/W2357220603, https://openalex.org/W2086569686, https://openalex.org/W3038394335, https://openalex.org/W2133991766, https://openalex.org/W2131534116, https://openalex.org/W4404851645, https://openalex.org/W2106265368, https://openalex.org/W4394670334 |
| cited_by_count | 1 |
| counts_by_year[0].year | 2025 |
| counts_by_year[0].cited_by_count | 1 |
| locations_count | 4 |
| best_oa_location.id | doi:10.3390/biology13070469 |
| best_oa_location.is_oa | True |
| best_oa_location.source.id | https://openalex.org/S153489431 |
| best_oa_location.source.issn | 2079-7737 |
| best_oa_location.source.type | journal |
| best_oa_location.source.is_oa | True |
| best_oa_location.source.issn_l | 2079-7737 |
| best_oa_location.source.is_core | True |
| best_oa_location.source.is_in_doaj | True |
| best_oa_location.source.display_name | Biology |
| best_oa_location.source.host_organization | https://openalex.org/P4310310987 |
| best_oa_location.source.host_organization_name | Multidisciplinary Digital Publishing Institute |
| best_oa_location.source.host_organization_lineage | https://openalex.org/P4310310987 |
| best_oa_location.source.host_organization_lineage_names | Multidisciplinary Digital Publishing Institute |
| best_oa_location.license | cc-by |
| best_oa_location.pdf_url | https://www.mdpi.com/2079-7737/13/7/469/pdf?version=1719385243 |
| best_oa_location.version | publishedVersion |
| best_oa_location.raw_type | journal-article |
| best_oa_location.license_id | https://openalex.org/licenses/cc-by |
| best_oa_location.is_accepted | True |
| best_oa_location.is_published | True |
| best_oa_location.raw_source_name | Biology |
| best_oa_location.landing_page_url | https://doi.org/10.3390/biology13070469 |
| primary_location.id | doi:10.3390/biology13070469 |
| primary_location.is_oa | True |
| primary_location.source.id | https://openalex.org/S153489431 |
| primary_location.source.issn | 2079-7737 |
| primary_location.source.type | journal |
| primary_location.source.is_oa | True |
| primary_location.source.issn_l | 2079-7737 |
| primary_location.source.is_core | True |
| primary_location.source.is_in_doaj | True |
| primary_location.source.display_name | Biology |
| primary_location.source.host_organization | https://openalex.org/P4310310987 |
| primary_location.source.host_organization_name | Multidisciplinary Digital Publishing Institute |
| primary_location.source.host_organization_lineage | https://openalex.org/P4310310987 |
| primary_location.source.host_organization_lineage_names | Multidisciplinary Digital Publishing Institute |
| primary_location.license | cc-by |
| primary_location.pdf_url | https://www.mdpi.com/2079-7737/13/7/469/pdf?version=1719385243 |
| primary_location.version | publishedVersion |
| primary_location.raw_type | journal-article |
| primary_location.license_id | https://openalex.org/licenses/cc-by |
| primary_location.is_accepted | True |
| primary_location.is_published | True |
| primary_location.raw_source_name | Biology |
| primary_location.landing_page_url | https://doi.org/10.3390/biology13070469 |
| publication_date | 2024-06-26 |
| publication_year | 2024 |
| referenced_works | https://openalex.org/W4283259787, https://openalex.org/W2934645065, https://openalex.org/W3085903624, https://openalex.org/W2927639726, https://openalex.org/W2536253052, https://openalex.org/W2121884322, https://openalex.org/W2765202940, https://openalex.org/W2076397859, https://openalex.org/W1988371373, https://openalex.org/W2055758623, https://openalex.org/W1968738598, https://openalex.org/W4366822416, https://openalex.org/W4292651681, https://openalex.org/W2128984258, https://openalex.org/W1831374844, https://openalex.org/W3143063265, https://openalex.org/W2124817677, https://openalex.org/W2003891151, https://openalex.org/W2949393605, https://openalex.org/W4308124065, https://openalex.org/W2140059614, https://openalex.org/W3126114288, https://openalex.org/W4365457298, https://openalex.org/W2963563404, https://openalex.org/W2027116188, https://openalex.org/W1974413176, https://openalex.org/W2432572080, https://openalex.org/W2034415271, https://openalex.org/W4390650700, https://openalex.org/W4313487969, https://openalex.org/W2162961259, https://openalex.org/W2118103407, https://openalex.org/W2751395683, https://openalex.org/W1978775274 |
| referenced_works_count | 34 |
| abstract_inverted_index.a | 5, 27, 113, 139 |
| abstract_inverted_index.In | 52 |
| abstract_inverted_index.We | 137 |
| abstract_inverted_index.an | 105 |
| abstract_inverted_index.as | 76, 147 |
| abstract_inverted_index.in | 9, 21, 37, 90, 107, 115, 142, 162 |
| abstract_inverted_index.is | 4, 26 |
| abstract_inverted_index.of | 18, 29, 49, 66, 126, 132, 150, 177 |
| abstract_inverted_index.on | 46 |
| abstract_inverted_index.to | 58, 83, 112 |
| abstract_inverted_index.we | 55 |
| abstract_inverted_index.For | 118 |
| abstract_inverted_index.HGT | 39, 68, 145, 167, 179 |
| abstract_inverted_index.Our | 80, 156 |
| abstract_inverted_index.and | 96, 102, 169, 183 |
| abstract_inverted_index.are | 99 |
| abstract_inverted_index.but | 129 |
| abstract_inverted_index.for | 11 |
| abstract_inverted_index.has | 43 |
| abstract_inverted_index.how | 60 |
| abstract_inverted_index.our | 53, 77, 119 |
| abstract_inverted_index.the | 16, 47, 64, 72, 85, 148, 154, 160, 165, 175 |
| abstract_inverted_index.was | 82 |
| abstract_inverted_index.HGT, | 25 |
| abstract_inverted_index.been | 34, 44 |
| abstract_inverted_index.bias | 164 |
| abstract_inverted_index.data | 157 |
| abstract_inverted_index.four | 121 |
| abstract_inverted_index.from | 71 |
| abstract_inverted_index.gene | 1 |
| abstract_inverted_index.have | 33 |
| abstract_inverted_index.that | 104, 159 |
| abstract_inverted_index.this | 19 |
| abstract_inverted_index.were | 135 |
| abstract_inverted_index.with | 123, 173 |
| abstract_inverted_index.(HGT) | 3 |
| abstract_inverted_index.HGTs. | 117 |
| abstract_inverted_index.among | 180 |
| abstract_inverted_index.focus | 78 |
| abstract_inverted_index.found | 89 |
| abstract_inverted_index.fungi | 182 |
| abstract_inverted_index.leads | 111 |
| abstract_inverted_index.other | 185 |
| abstract_inverted_index.there | 32 |
| abstract_inverted_index.topic | 28 |
| abstract_inverted_index.using | 69 |
| abstract_inverted_index.where | 94 |
| abstract_inverted_index.affect | 63 |
| abstract_inverted_index.assess | 59 |
| abstract_inverted_index.biases | 36 |
| abstract_inverted_index.fungal | 74 |
| abstract_inverted_index.group. | 79 |
| abstract_inverted_index.groups | 186 |
| abstract_inverted_index.impact | 17 |
| abstract_inverted_index.little | 41 |
| abstract_inverted_index.public | 91 |
| abstract_inverted_index.study, | 54 |
| abstract_inverted_index.widely | 6 |
| abstract_inverted_index.within | 153, 187 |
| abstract_inverted_index.debate. | 30 |
| abstract_inverted_index.effects | 48 |
| abstract_inverted_index.genetic | 13 |
| abstract_inverted_index.process | 20 |
| abstract_inverted_index.suggest | 158 |
| abstract_inverted_index.varying | 124 |
| abstract_inverted_index.Although | 31 |
| abstract_inverted_index.Eukarya. | 188 |
| abstract_inverted_index.However, | 15 |
| abstract_inverted_index.commonly | 88 |
| abstract_inverted_index.database | 86 |
| abstract_inverted_index.decrease | 114 |
| abstract_inverted_index.detected | 143 |
| abstract_inverted_index.increase | 106 |
| abstract_inverted_index.observed | 35, 138 |
| abstract_inverted_index.presence | 176 |
| abstract_inverted_index.simulate | 84 |
| abstract_inverted_index.transfer | 2 |
| abstract_inverted_index.unevenly | 100 |
| abstract_inverted_index.uploaded | 108 |
| abstract_inverted_index.bacterial | 95, 133 |
| abstract_inverted_index.conducted | 45, 56 |
| abstract_inverted_index.database. | 155 |
| abstract_inverted_index.databases | 62, 122, 163 |
| abstract_inverted_index.detection | 65, 168 |
| abstract_inverted_index.different | 61 |
| abstract_inverted_index.imbalance | 87, 161 |
| abstract_inverted_index.increased | 152 |
| abstract_inverted_index.objective | 81 |
| abstract_inverted_index.predicted | 116 |
| abstract_inverted_index.proteomes | 70 |
| abstract_inverted_index.reduction | 141 |
| abstract_inverted_index.sequences | 98, 110, 128, 134 |
| abstract_inverted_index.subphylum | 75 |
| abstract_inverted_index.utilized. | 136 |
| abstract_inverted_index.Horizontal | 0 |
| abstract_inverted_index.associated | 172 |
| abstract_inverted_index.biological | 92 |
| abstract_inverted_index.candidates | 146 |
| abstract_inverted_index.challenges | 171 |
| abstract_inverted_index.confirming | 174 |
| abstract_inverted_index.consistent | 130 |
| abstract_inverted_index.databases, | 93 |
| abstract_inverted_index.databases. | 51 |
| abstract_inverted_index.detection, | 40 |
| abstract_inverted_index.diversity. | 14 |
| abstract_inverted_index.eukaryotes | 151 |
| abstract_inverted_index.eukaryotic | 97, 109, 127 |
| abstract_inverted_index.generating | 12 |
| abstract_inverted_index.highlights | 170 |
| abstract_inverted_index.imbalanced | 50 |
| abstract_inverted_index.phenomenon | 8 |
| abstract_inverted_index.proportion | 149 |
| abstract_inverted_index.demonstrate | 103 |
| abstract_inverted_index.eukaryotes, | 22 |
| abstract_inverted_index.experiments | 57 |
| abstract_inverted_index.exploration | 42 |
| abstract_inverted_index.interdomain | 24, 38, 67, 144, 166, 178 |
| abstract_inverted_index.potentially | 184 |
| abstract_inverted_index.prokaryotes | 10 |
| abstract_inverted_index.proportions | 125, 131 |
| abstract_inverted_index.significant | 140 |
| abstract_inverted_index.acknowledged | 7 |
| abstract_inverted_index.experiments, | 120 |
| abstract_inverted_index.particularly | 23 |
| abstract_inverted_index.represented, | 101 |
| abstract_inverted_index.Pezizomycotina | 73, 181 |
| cited_by_percentile_year.max | 95 |
| cited_by_percentile_year.min | 91 |
| corresponding_author_ids | https://openalex.org/A5001965047 |
| countries_distinct_count | 2 |
| institutions_distinct_count | 3 |
| corresponding_institution_ids | https://openalex.org/I4210102282 |
| sustainable_development_goals[0].id | https://metadata.un.org/sdg/15 |
| sustainable_development_goals[0].score | 0.44999998807907104 |
| sustainable_development_goals[0].display_name | Life in Land |
| citation_normalized_percentile.value | 0.59306557 |
| citation_normalized_percentile.is_in_top_1_percent | False |
| citation_normalized_percentile.is_in_top_10_percent | False |