DBG2OLC: Efficient Assembly of Large Genomes Using Long Erroneous Reads of the Third Generation Sequencing Technologies Article Swipe
Chengxi Ye
,
C. Hill
,
Shigang Wu
,
Jue Ruan
,
Zhanshan Ma
·
YOU?
·
· 2016
· Open Access
·
· DOI: https://doi.org/10.1038/srep31900
YOU?
·
· 2016
· Open Access
·
· DOI: https://doi.org/10.1038/srep31900
Related Topics
Concepts
Contig
Computer science
De Bruijn graph
Sequence assembly
Hybrid genome assembly
Software
DNA sequencing
De Bruijn sequence
Error detection and correction
Graph
Genome
Data mining
Theoretical computer science
Computational biology
Algorithm
Biology
Genetics
Programming language
DNA
Mathematics
Discrete mathematics
Gene
Gene expression
Transcriptome
Metadata
- Type
- article
- Language
- en
- Landing Page
- https://doi.org/10.1038/srep31900
- https://www.nature.com/articles/srep31900.pdf
- OA Status
- gold
- Cited By
- 347
- References
- 45
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W2397469828
All OpenAlex metadata
Raw OpenAlex JSON
- OpenAlex ID
-
https://openalex.org/W2397469828Canonical identifier for this work in OpenAlex
- DOI
-
https://doi.org/10.1038/srep31900Digital Object Identifier
- Title
-
DBG2OLC: Efficient Assembly of Large Genomes Using Long Erroneous Reads of the Third Generation Sequencing TechnologiesWork title
- Type
-
articleOpenAlex work type
- Language
-
enPrimary language
- Publication year
-
2016Year of publication
- Publication date
-
2016-08-30Full publication date if available
- Authors
-
Chengxi Ye, C. Hill, Shigang Wu, Jue Ruan, Zhanshan MaList of authors in order
- Landing page
-
https://doi.org/10.1038/srep31900Publisher landing page
- PDF URL
-
https://www.nature.com/articles/srep31900.pdfDirect link to full text PDF
- Open access
-
YesWhether a free full text is available
- OA status
-
goldOpen access status per OpenAlex
- OA URL
-
https://www.nature.com/articles/srep31900.pdfDirect OA link when available
- Concepts
-
Contig, Computer science, De Bruijn graph, Sequence assembly, Hybrid genome assembly, Software, DNA sequencing, De Bruijn sequence, Error detection and correction, Graph, Genome, Data mining, Theoretical computer science, Computational biology, Algorithm, Biology, Genetics, Programming language, DNA, Mathematics, Discrete mathematics, Gene, Gene expression, TranscriptomeTop concepts (fields/topics) attached by OpenAlex
- Cited by
-
347Total citation count in OpenAlex
- Citations by year (recent)
-
2025: 8, 2024: 30, 2023: 52, 2022: 33, 2021: 49Per-year citation counts (last 5 years)
- References (count)
-
45Number of works referenced by this work
- Related works (count)
-
10Other works algorithmically related by OpenAlex
Full payload
| id | https://openalex.org/W2397469828 |
|---|---|
| doi | https://doi.org/10.1038/srep31900 |
| ids.doi | https://doi.org/10.1038/srep31900 |
| ids.mag | 2397469828 |
| ids.pmid | https://pubmed.ncbi.nlm.nih.gov/27573208 |
| ids.openalex | https://openalex.org/W2397469828 |
| fwci | 22.35907529 |
| mesh[0].qualifier_ui | Q000379 |
| mesh[0].descriptor_ui | D019295 |
| mesh[0].is_major_topic | False |
| mesh[0].qualifier_name | methods |
| mesh[0].descriptor_name | Computational Biology |
| mesh[1].qualifier_ui | Q000379 |
| mesh[1].descriptor_ui | D023281 |
| mesh[1].is_major_topic | False |
| mesh[1].qualifier_name | methods |
| mesh[1].descriptor_name | Genomics |
| mesh[2].qualifier_ui | Q000379 |
| mesh[2].descriptor_ui | D059014 |
| mesh[2].is_major_topic | False |
| mesh[2].qualifier_name | methods |
| mesh[2].descriptor_name | High-Throughput Nucleotide Sequencing |
| mesh[3].qualifier_ui | Q000379 |
| mesh[3].descriptor_ui | D017422 |
| mesh[3].is_major_topic | False |
| mesh[3].qualifier_name | methods |
| mesh[3].descriptor_name | Sequence Analysis, DNA |
| mesh[4].qualifier_ui | Q000379 |
| mesh[4].descriptor_ui | D019295 |
| mesh[4].is_major_topic | False |
| mesh[4].qualifier_name | methods |
| mesh[4].descriptor_name | Computational Biology |
| mesh[5].qualifier_ui | Q000379 |
| mesh[5].descriptor_ui | D023281 |
| mesh[5].is_major_topic | False |
| mesh[5].qualifier_name | methods |
| mesh[5].descriptor_name | Genomics |
| mesh[6].qualifier_ui | Q000379 |
| mesh[6].descriptor_ui | D059014 |
| mesh[6].is_major_topic | False |
| mesh[6].qualifier_name | methods |
| mesh[6].descriptor_name | High-Throughput Nucleotide Sequencing |
| mesh[7].qualifier_ui | Q000379 |
| mesh[7].descriptor_ui | D017422 |
| mesh[7].is_major_topic | False |
| mesh[7].qualifier_name | methods |
| mesh[7].descriptor_name | Sequence Analysis, DNA |
| type | article |
| title | DBG2OLC: Efficient Assembly of Large Genomes Using Long Erroneous Reads of the Third Generation Sequencing Technologies |
| biblio.issue | 1 |
| biblio.volume | 6 |
| biblio.last_page | 31900 |
| biblio.first_page | 31900 |
| topics[0].id | https://openalex.org/T10015 |
| topics[0].field.id | https://openalex.org/fields/13 |
| topics[0].field.display_name | Biochemistry, Genetics and Molecular Biology |
| topics[0].score | 0.9998000264167786 |
| topics[0].domain.id | https://openalex.org/domains/1 |
| topics[0].domain.display_name | Life Sciences |
| topics[0].subfield.id | https://openalex.org/subfields/1312 |
| topics[0].subfield.display_name | Molecular Biology |
| topics[0].display_name | Genomics and Phylogenetic Studies |
| topics[1].id | https://openalex.org/T11048 |
| topics[1].field.id | https://openalex.org/fields/23 |
| topics[1].field.display_name | Environmental Science |
| topics[1].score | 0.9868000149726868 |
| topics[1].domain.id | https://openalex.org/domains/3 |
| topics[1].domain.display_name | Physical Sciences |
| topics[1].subfield.id | https://openalex.org/subfields/2303 |
| topics[1].subfield.display_name | Ecology |
| topics[1].display_name | Bacteriophages and microbial interactions |
| topics[2].id | https://openalex.org/T10434 |
| topics[2].field.id | https://openalex.org/fields/11 |
| topics[2].field.display_name | Agricultural and Biological Sciences |
| topics[2].score | 0.9866999983787537 |
| topics[2].domain.id | https://openalex.org/domains/1 |
| topics[2].domain.display_name | Life Sciences |
| topics[2].subfield.id | https://openalex.org/subfields/1110 |
| topics[2].subfield.display_name | Plant Science |
| topics[2].display_name | Chromosomal and Genetic Variations |
| is_xpac | False |
| apc_list.value | 1890 |
| apc_list.currency | EUR |
| apc_list.value_usd | 2190 |
| apc_paid.value | 1890 |
| apc_paid.currency | EUR |
| apc_paid.value_usd | 2190 |
| concepts[0].id | https://openalex.org/C59582021 |
| concepts[0].level | 4 |
| concepts[0].score | 0.8186647891998291 |
| concepts[0].wikidata | https://www.wikidata.org/wiki/Q1128751 |
| concepts[0].display_name | Contig |
| concepts[1].id | https://openalex.org/C41008148 |
| concepts[1].level | 0 |
| concepts[1].score | 0.7482562065124512 |
| concepts[1].wikidata | https://www.wikidata.org/wiki/Q21198 |
| concepts[1].display_name | Computer science |
| concepts[2].id | https://openalex.org/C20218877 |
| concepts[2].level | 3 |
| concepts[2].score | 0.7348676919937134 |
| concepts[2].wikidata | https://www.wikidata.org/wiki/Q3066095 |
| concepts[2].display_name | De Bruijn graph |
| concepts[3].id | https://openalex.org/C18949551 |
| concepts[3].level | 5 |
| concepts[3].score | 0.7180017232894897 |
| concepts[3].wikidata | https://www.wikidata.org/wiki/Q740578 |
| concepts[3].display_name | Sequence assembly |
| concepts[4].id | https://openalex.org/C113425843 |
| concepts[4].level | 5 |
| concepts[4].score | 0.6237627863883972 |
| concepts[4].wikidata | https://www.wikidata.org/wiki/Q5953213 |
| concepts[4].display_name | Hybrid genome assembly |
| concepts[5].id | https://openalex.org/C2777904410 |
| concepts[5].level | 2 |
| concepts[5].score | 0.6155025362968445 |
| concepts[5].wikidata | https://www.wikidata.org/wiki/Q7397 |
| concepts[5].display_name | Software |
| concepts[6].id | https://openalex.org/C51679486 |
| concepts[6].level | 3 |
| concepts[6].score | 0.5205846428871155 |
| concepts[6].wikidata | https://www.wikidata.org/wiki/Q380546 |
| concepts[6].display_name | DNA sequencing |
| concepts[7].id | https://openalex.org/C170320093 |
| concepts[7].level | 2 |
| concepts[7].score | 0.4811764657497406 |
| concepts[7].wikidata | https://www.wikidata.org/wiki/Q1953457 |
| concepts[7].display_name | De Bruijn sequence |
| concepts[8].id | https://openalex.org/C103088060 |
| concepts[8].level | 2 |
| concepts[8].score | 0.4604111611843109 |
| concepts[8].wikidata | https://www.wikidata.org/wiki/Q1062839 |
| concepts[8].display_name | Error detection and correction |
| concepts[9].id | https://openalex.org/C132525143 |
| concepts[9].level | 2 |
| concepts[9].score | 0.4179193079471588 |
| concepts[9].wikidata | https://www.wikidata.org/wiki/Q141488 |
| concepts[9].display_name | Graph |
| concepts[10].id | https://openalex.org/C141231307 |
| concepts[10].level | 3 |
| concepts[10].score | 0.3524553179740906 |
| concepts[10].wikidata | https://www.wikidata.org/wiki/Q7020 |
| concepts[10].display_name | Genome |
| concepts[11].id | https://openalex.org/C124101348 |
| concepts[11].level | 1 |
| concepts[11].score | 0.32652243971824646 |
| concepts[11].wikidata | https://www.wikidata.org/wiki/Q172491 |
| concepts[11].display_name | Data mining |
| concepts[12].id | https://openalex.org/C80444323 |
| concepts[12].level | 1 |
| concepts[12].score | 0.3226870894432068 |
| concepts[12].wikidata | https://www.wikidata.org/wiki/Q2878974 |
| concepts[12].display_name | Theoretical computer science |
| concepts[13].id | https://openalex.org/C70721500 |
| concepts[13].level | 1 |
| concepts[13].score | 0.3215702772140503 |
| concepts[13].wikidata | https://www.wikidata.org/wiki/Q177005 |
| concepts[13].display_name | Computational biology |
| concepts[14].id | https://openalex.org/C11413529 |
| concepts[14].level | 1 |
| concepts[14].score | 0.2503652274608612 |
| concepts[14].wikidata | https://www.wikidata.org/wiki/Q8366 |
| concepts[14].display_name | Algorithm |
| concepts[15].id | https://openalex.org/C86803240 |
| concepts[15].level | 0 |
| concepts[15].score | 0.20715299248695374 |
| concepts[15].wikidata | https://www.wikidata.org/wiki/Q420 |
| concepts[15].display_name | Biology |
| concepts[16].id | https://openalex.org/C54355233 |
| concepts[16].level | 1 |
| concepts[16].score | 0.11832058429718018 |
| concepts[16].wikidata | https://www.wikidata.org/wiki/Q7162 |
| concepts[16].display_name | Genetics |
| concepts[17].id | https://openalex.org/C199360897 |
| concepts[17].level | 1 |
| concepts[17].score | 0.09550154209136963 |
| concepts[17].wikidata | https://www.wikidata.org/wiki/Q9143 |
| concepts[17].display_name | Programming language |
| concepts[18].id | https://openalex.org/C552990157 |
| concepts[18].level | 2 |
| concepts[18].score | 0.08642911911010742 |
| concepts[18].wikidata | https://www.wikidata.org/wiki/Q7430 |
| concepts[18].display_name | DNA |
| concepts[19].id | https://openalex.org/C33923547 |
| concepts[19].level | 0 |
| concepts[19].score | 0.08069068193435669 |
| concepts[19].wikidata | https://www.wikidata.org/wiki/Q395 |
| concepts[19].display_name | Mathematics |
| concepts[20].id | https://openalex.org/C118615104 |
| concepts[20].level | 1 |
| concepts[20].score | 0.0 |
| concepts[20].wikidata | https://www.wikidata.org/wiki/Q121416 |
| concepts[20].display_name | Discrete mathematics |
| concepts[21].id | https://openalex.org/C104317684 |
| concepts[21].level | 2 |
| concepts[21].score | 0.0 |
| concepts[21].wikidata | https://www.wikidata.org/wiki/Q7187 |
| concepts[21].display_name | Gene |
| concepts[22].id | https://openalex.org/C150194340 |
| concepts[22].level | 3 |
| concepts[22].score | 0.0 |
| concepts[22].wikidata | https://www.wikidata.org/wiki/Q26972 |
| concepts[22].display_name | Gene expression |
| concepts[23].id | https://openalex.org/C162317418 |
| concepts[23].level | 4 |
| concepts[23].score | 0.0 |
| concepts[23].wikidata | https://www.wikidata.org/wiki/Q252857 |
| concepts[23].display_name | Transcriptome |
| keywords[0].id | https://openalex.org/keywords/contig |
| keywords[0].score | 0.8186647891998291 |
| keywords[0].display_name | Contig |
| keywords[1].id | https://openalex.org/keywords/computer-science |
| keywords[1].score | 0.7482562065124512 |
| keywords[1].display_name | Computer science |
| keywords[2].id | https://openalex.org/keywords/de-bruijn-graph |
| keywords[2].score | 0.7348676919937134 |
| keywords[2].display_name | De Bruijn graph |
| keywords[3].id | https://openalex.org/keywords/sequence-assembly |
| keywords[3].score | 0.7180017232894897 |
| keywords[3].display_name | Sequence assembly |
| keywords[4].id | https://openalex.org/keywords/hybrid-genome-assembly |
| keywords[4].score | 0.6237627863883972 |
| keywords[4].display_name | Hybrid genome assembly |
| keywords[5].id | https://openalex.org/keywords/software |
| keywords[5].score | 0.6155025362968445 |
| keywords[5].display_name | Software |
| keywords[6].id | https://openalex.org/keywords/dna-sequencing |
| keywords[6].score | 0.5205846428871155 |
| keywords[6].display_name | DNA sequencing |
| keywords[7].id | https://openalex.org/keywords/de-bruijn-sequence |
| keywords[7].score | 0.4811764657497406 |
| keywords[7].display_name | De Bruijn sequence |
| keywords[8].id | https://openalex.org/keywords/error-detection-and-correction |
| keywords[8].score | 0.4604111611843109 |
| keywords[8].display_name | Error detection and correction |
| keywords[9].id | https://openalex.org/keywords/graph |
| keywords[9].score | 0.4179193079471588 |
| keywords[9].display_name | Graph |
| keywords[10].id | https://openalex.org/keywords/genome |
| keywords[10].score | 0.3524553179740906 |
| keywords[10].display_name | Genome |
| keywords[11].id | https://openalex.org/keywords/data-mining |
| keywords[11].score | 0.32652243971824646 |
| keywords[11].display_name | Data mining |
| keywords[12].id | https://openalex.org/keywords/theoretical-computer-science |
| keywords[12].score | 0.3226870894432068 |
| keywords[12].display_name | Theoretical computer science |
| keywords[13].id | https://openalex.org/keywords/computational-biology |
| keywords[13].score | 0.3215702772140503 |
| keywords[13].display_name | Computational biology |
| keywords[14].id | https://openalex.org/keywords/algorithm |
| keywords[14].score | 0.2503652274608612 |
| keywords[14].display_name | Algorithm |
| keywords[15].id | https://openalex.org/keywords/biology |
| keywords[15].score | 0.20715299248695374 |
| keywords[15].display_name | Biology |
| keywords[16].id | https://openalex.org/keywords/genetics |
| keywords[16].score | 0.11832058429718018 |
| keywords[16].display_name | Genetics |
| keywords[17].id | https://openalex.org/keywords/programming-language |
| keywords[17].score | 0.09550154209136963 |
| keywords[17].display_name | Programming language |
| keywords[18].id | https://openalex.org/keywords/dna |
| keywords[18].score | 0.08642911911010742 |
| keywords[18].display_name | DNA |
| keywords[19].id | https://openalex.org/keywords/mathematics |
| keywords[19].score | 0.08069068193435669 |
| keywords[19].display_name | Mathematics |
| language | en |
| locations[0].id | doi:10.1038/srep31900 |
| locations[0].is_oa | True |
| locations[0].source.id | https://openalex.org/S196734849 |
| locations[0].source.issn | 2045-2322 |
| locations[0].source.type | journal |
| locations[0].source.is_oa | True |
| locations[0].source.issn_l | 2045-2322 |
| locations[0].source.is_core | True |
| locations[0].source.is_in_doaj | True |
| locations[0].source.display_name | Scientific Reports |
| locations[0].source.host_organization | https://openalex.org/P4310319908 |
| locations[0].source.host_organization_name | Nature Portfolio |
| locations[0].source.host_organization_lineage | https://openalex.org/P4310319908, https://openalex.org/P4310319965 |
| locations[0].source.host_organization_lineage_names | Nature Portfolio, Springer Nature |
| locations[0].license | cc-by |
| locations[0].pdf_url | https://www.nature.com/articles/srep31900.pdf |
| locations[0].version | publishedVersion |
| locations[0].raw_type | journal-article |
| locations[0].license_id | https://openalex.org/licenses/cc-by |
| locations[0].is_accepted | True |
| locations[0].is_published | True |
| locations[0].raw_source_name | Scientific Reports |
| locations[0].landing_page_url | https://doi.org/10.1038/srep31900 |
| locations[1].id | pmid:27573208 |
| locations[1].is_oa | False |
| locations[1].source.id | https://openalex.org/S4306525036 |
| locations[1].source.issn | |
| locations[1].source.type | repository |
| locations[1].source.is_oa | False |
| locations[1].source.issn_l | |
| locations[1].source.is_core | False |
| locations[1].source.is_in_doaj | False |
| locations[1].source.display_name | PubMed |
| locations[1].source.host_organization | https://openalex.org/I1299303238 |
| locations[1].source.host_organization_name | National Institutes of Health |
| locations[1].source.host_organization_lineage | https://openalex.org/I1299303238 |
| locations[1].license | |
| locations[1].pdf_url | |
| locations[1].version | publishedVersion |
| locations[1].raw_type | |
| locations[1].license_id | |
| locations[1].is_accepted | True |
| locations[1].is_published | True |
| locations[1].raw_source_name | Scientific reports |
| locations[1].landing_page_url | https://pubmed.ncbi.nlm.nih.gov/27573208 |
| locations[2].id | pmh:oai:arXiv.org:1410.2801 |
| locations[2].is_oa | True |
| locations[2].source.id | https://openalex.org/S4306400194 |
| locations[2].source.issn | |
| locations[2].source.type | repository |
| locations[2].source.is_oa | True |
| locations[2].source.issn_l | |
| locations[2].source.is_core | False |
| locations[2].source.is_in_doaj | False |
| locations[2].source.display_name | arXiv (Cornell University) |
| locations[2].source.host_organization | https://openalex.org/I205783295 |
| locations[2].source.host_organization_name | Cornell University |
| locations[2].source.host_organization_lineage | https://openalex.org/I205783295 |
| locations[2].license | |
| locations[2].pdf_url | https://arxiv.org/pdf/1410.2801 |
| locations[2].version | submittedVersion |
| locations[2].raw_type | text |
| locations[2].license_id | |
| locations[2].is_accepted | False |
| locations[2].is_published | False |
| locations[2].raw_source_name | |
| locations[2].landing_page_url | http://arxiv.org/abs/1410.2801 |
| locations[3].id | pmh:oai:pubmedcentral.nih.gov:5004134 |
| locations[3].is_oa | True |
| locations[3].source.id | https://openalex.org/S2764455111 |
| locations[3].source.issn | |
| locations[3].source.type | repository |
| locations[3].source.is_oa | False |
| locations[3].source.issn_l | |
| locations[3].source.is_core | False |
| locations[3].source.is_in_doaj | False |
| locations[3].source.display_name | PubMed Central |
| locations[3].source.host_organization | https://openalex.org/I1299303238 |
| locations[3].source.host_organization_name | National Institutes of Health |
| locations[3].source.host_organization_lineage | https://openalex.org/I1299303238 |
| locations[3].license | cc-by |
| locations[3].pdf_url | |
| locations[3].version | submittedVersion |
| locations[3].raw_type | Text |
| locations[3].license_id | https://openalex.org/licenses/cc-by |
| locations[3].is_accepted | False |
| locations[3].is_published | False |
| locations[3].raw_source_name | Sci Rep |
| locations[3].landing_page_url | https://www.ncbi.nlm.nih.gov/pmc/articles/5004134 |
| indexed_in | arxiv, crossref, doaj, pubmed |
| authorships[0].author.id | https://openalex.org/A5023301667 |
| authorships[0].author.orcid | https://orcid.org/0000-0002-1850-9759 |
| authorships[0].author.display_name | Chengxi Ye |
| authorships[0].countries | US |
| authorships[0].affiliations[0].institution_ids | https://openalex.org/I66946132 |
| authorships[0].affiliations[0].raw_affiliation_string | Department of Computer Science, Institute for Advanced Computer Studies, University of Maryland, College Park, 20742, MD, USA |
| authorships[0].institutions[0].id | https://openalex.org/I66946132 |
| authorships[0].institutions[0].ror | https://ror.org/047s2c258 |
| authorships[0].institutions[0].type | education |
| authorships[0].institutions[0].lineage | https://openalex.org/I66946132 |
| authorships[0].institutions[0].country_code | US |
| authorships[0].institutions[0].display_name | University of Maryland, College Park |
| authorships[0].author_position | first |
| authorships[0].raw_author_name | Chengxi Ye |
| authorships[0].is_corresponding | False |
| authorships[0].raw_affiliation_strings | Department of Computer Science, Institute for Advanced Computer Studies, University of Maryland, College Park, 20742, MD, USA |
| authorships[1].author.id | https://openalex.org/A5102742241 |
| authorships[1].author.orcid | https://orcid.org/0000-0002-6932-6303 |
| authorships[1].author.display_name | C. Hill |
| authorships[1].countries | US |
| authorships[1].affiliations[0].institution_ids | https://openalex.org/I66946132 |
| authorships[1].affiliations[0].raw_affiliation_string | Department of Computer Science, Institute for Advanced Computer Studies, University of Maryland, College Park, 20742, MD, USA |
| authorships[1].institutions[0].id | https://openalex.org/I66946132 |
| authorships[1].institutions[0].ror | https://ror.org/047s2c258 |
| authorships[1].institutions[0].type | education |
| authorships[1].institutions[0].lineage | https://openalex.org/I66946132 |
| authorships[1].institutions[0].country_code | US |
| authorships[1].institutions[0].display_name | University of Maryland, College Park |
| authorships[1].author_position | middle |
| authorships[1].raw_author_name | Christopher M. Hill |
| authorships[1].is_corresponding | False |
| authorships[1].raw_affiliation_strings | Department of Computer Science, Institute for Advanced Computer Studies, University of Maryland, College Park, 20742, MD, USA |
| authorships[2].author.id | https://openalex.org/A5017724076 |
| authorships[2].author.orcid | https://orcid.org/0000-0003-0982-8093 |
| authorships[2].author.display_name | Shigang Wu |
| authorships[2].countries | CN |
| authorships[2].affiliations[0].institution_ids | https://openalex.org/I4210088191, https://openalex.org/I4210138501 |
| authorships[2].affiliations[0].raw_affiliation_string | Agricultural Genome Institute, Chinese Academy of Agricultural Sciences, No.7 Pengfei Road, Dapeng New District, Shenzhen, 518120, Guangdong, China |
| authorships[2].institutions[0].id | https://openalex.org/I4210088191 |
| authorships[2].institutions[0].ror | https://ror.org/0066zpp98 |
| authorships[2].institutions[0].type | facility |
| authorships[2].institutions[0].lineage | https://openalex.org/I4210088191, https://openalex.org/I4210127390, https://openalex.org/I4210138501, https://openalex.org/I4210151987 |
| authorships[2].institutions[0].country_code | CN |
| authorships[2].institutions[0].display_name | Agricultural Genomics Institute at Shenzhen |
| authorships[2].institutions[1].id | https://openalex.org/I4210138501 |
| authorships[2].institutions[1].ror | https://ror.org/0313jb750 |
| authorships[2].institutions[1].type | government |
| authorships[2].institutions[1].lineage | https://openalex.org/I4210127390, https://openalex.org/I4210138501, https://openalex.org/I4210151987 |
| authorships[2].institutions[1].country_code | CN |
| authorships[2].institutions[1].display_name | Chinese Academy of Agricultural Sciences |
| authorships[2].author_position | middle |
| authorships[2].raw_author_name | Shigang Wu |
| authorships[2].is_corresponding | False |
| authorships[2].raw_affiliation_strings | Agricultural Genome Institute, Chinese Academy of Agricultural Sciences, No.7 Pengfei Road, Dapeng New District, Shenzhen, 518120, Guangdong, China |
| authorships[3].author.id | https://openalex.org/A5088950998 |
| authorships[3].author.orcid | https://orcid.org/0000-0003-3713-3192 |
| authorships[3].author.display_name | Jue Ruan |
| authorships[3].countries | CN |
| authorships[3].affiliations[0].institution_ids | https://openalex.org/I4210088191, https://openalex.org/I4210138501 |
| authorships[3].affiliations[0].raw_affiliation_string | Agricultural Genome Institute, Chinese Academy of Agricultural Sciences, No.7 Pengfei Road, Dapeng New District, Shenzhen, 518120, Guangdong, China |
| authorships[3].institutions[0].id | https://openalex.org/I4210088191 |
| authorships[3].institutions[0].ror | https://ror.org/0066zpp98 |
| authorships[3].institutions[0].type | facility |
| authorships[3].institutions[0].lineage | https://openalex.org/I4210088191, https://openalex.org/I4210127390, https://openalex.org/I4210138501, https://openalex.org/I4210151987 |
| authorships[3].institutions[0].country_code | CN |
| authorships[3].institutions[0].display_name | Agricultural Genomics Institute at Shenzhen |
| authorships[3].institutions[1].id | https://openalex.org/I4210138501 |
| authorships[3].institutions[1].ror | https://ror.org/0313jb750 |
| authorships[3].institutions[1].type | government |
| authorships[3].institutions[1].lineage | https://openalex.org/I4210127390, https://openalex.org/I4210138501, https://openalex.org/I4210151987 |
| authorships[3].institutions[1].country_code | CN |
| authorships[3].institutions[1].display_name | Chinese Academy of Agricultural Sciences |
| authorships[3].author_position | middle |
| authorships[3].raw_author_name | Jue Ruan |
| authorships[3].is_corresponding | False |
| authorships[3].raw_affiliation_strings | Agricultural Genome Institute, Chinese Academy of Agricultural Sciences, No.7 Pengfei Road, Dapeng New District, Shenzhen, 518120, Guangdong, China |
| authorships[4].author.id | https://openalex.org/A5102938885 |
| authorships[4].author.orcid | https://orcid.org/0000-0002-4397-2630 |
| authorships[4].author.display_name | Zhanshan Ma |
| authorships[4].countries | CN |
| authorships[4].affiliations[0].institution_ids | https://openalex.org/I18489884, https://openalex.org/I19820366 |
| authorships[4].affiliations[0].raw_affiliation_string | Computational Biology and Medical Ecology Lab, State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, China |
| authorships[4].institutions[0].id | https://openalex.org/I19820366 |
| authorships[4].institutions[0].ror | https://ror.org/034t30j35 |
| authorships[4].institutions[0].type | government |
| authorships[4].institutions[0].lineage | https://openalex.org/I19820366 |
| authorships[4].institutions[0].country_code | CN |
| authorships[4].institutions[0].display_name | Chinese Academy of Sciences |
| authorships[4].institutions[1].id | https://openalex.org/I18489884 |
| authorships[4].institutions[1].ror | https://ror.org/03m0vk445 |
| authorships[4].institutions[1].type | facility |
| authorships[4].institutions[1].lineage | https://openalex.org/I18489884, https://openalex.org/I19820366 |
| authorships[4].institutions[1].country_code | CN |
| authorships[4].institutions[1].display_name | Kunming Institute of Zoology |
| authorships[4].author_position | last |
| authorships[4].raw_author_name | Zhanshan Ma |
| authorships[4].is_corresponding | False |
| authorships[4].raw_affiliation_strings | Computational Biology and Medical Ecology Lab, State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, China |
| has_content.pdf | True |
| has_content.grobid_xml | True |
| is_paratext | False |
| open_access.is_oa | True |
| open_access.oa_url | https://www.nature.com/articles/srep31900.pdf |
| open_access.oa_status | gold |
| open_access.any_repository_has_fulltext | False |
| created_date | 2025-10-10T00:00:00 |
| display_name | DBG2OLC: Efficient Assembly of Large Genomes Using Long Erroneous Reads of the Third Generation Sequencing Technologies |
| has_fulltext | True |
| is_retracted | False |
| updated_date | 2025-11-06T03:46:38.306776 |
| primary_topic.id | https://openalex.org/T10015 |
| primary_topic.field.id | https://openalex.org/fields/13 |
| primary_topic.field.display_name | Biochemistry, Genetics and Molecular Biology |
| primary_topic.score | 0.9998000264167786 |
| primary_topic.domain.id | https://openalex.org/domains/1 |
| primary_topic.domain.display_name | Life Sciences |
| primary_topic.subfield.id | https://openalex.org/subfields/1312 |
| primary_topic.subfield.display_name | Molecular Biology |
| primary_topic.display_name | Genomics and Phylogenetic Studies |
| related_works | https://openalex.org/W2127651281, https://openalex.org/W3167837387, https://openalex.org/W2993223466, https://openalex.org/W4387083702, https://openalex.org/W2944010518, https://openalex.org/W2949198880, https://openalex.org/W2119121014, https://openalex.org/W2141920662, https://openalex.org/W1978814852, https://openalex.org/W2131813051 |
| cited_by_count | 347 |
| counts_by_year[0].year | 2025 |
| counts_by_year[0].cited_by_count | 8 |
| counts_by_year[1].year | 2024 |
| counts_by_year[1].cited_by_count | 30 |
| counts_by_year[2].year | 2023 |
| counts_by_year[2].cited_by_count | 52 |
| counts_by_year[3].year | 2022 |
| counts_by_year[3].cited_by_count | 33 |
| counts_by_year[4].year | 2021 |
| counts_by_year[4].cited_by_count | 49 |
| counts_by_year[5].year | 2020 |
| counts_by_year[5].cited_by_count | 47 |
| counts_by_year[6].year | 2019 |
| counts_by_year[6].cited_by_count | 54 |
| counts_by_year[7].year | 2018 |
| counts_by_year[7].cited_by_count | 38 |
| counts_by_year[8].year | 2017 |
| counts_by_year[8].cited_by_count | 29 |
| counts_by_year[9].year | 2016 |
| counts_by_year[9].cited_by_count | 7 |
| locations_count | 4 |
| best_oa_location.id | doi:10.1038/srep31900 |
| best_oa_location.is_oa | True |
| best_oa_location.source.id | https://openalex.org/S196734849 |
| best_oa_location.source.issn | 2045-2322 |
| best_oa_location.source.type | journal |
| best_oa_location.source.is_oa | True |
| best_oa_location.source.issn_l | 2045-2322 |
| best_oa_location.source.is_core | True |
| best_oa_location.source.is_in_doaj | True |
| best_oa_location.source.display_name | Scientific Reports |
| best_oa_location.source.host_organization | https://openalex.org/P4310319908 |
| best_oa_location.source.host_organization_name | Nature Portfolio |
| best_oa_location.source.host_organization_lineage | https://openalex.org/P4310319908, https://openalex.org/P4310319965 |
| best_oa_location.source.host_organization_lineage_names | Nature Portfolio, Springer Nature |
| best_oa_location.license | cc-by |
| best_oa_location.pdf_url | https://www.nature.com/articles/srep31900.pdf |
| best_oa_location.version | publishedVersion |
| best_oa_location.raw_type | journal-article |
| best_oa_location.license_id | https://openalex.org/licenses/cc-by |
| best_oa_location.is_accepted | True |
| best_oa_location.is_published | True |
| best_oa_location.raw_source_name | Scientific Reports |
| best_oa_location.landing_page_url | https://doi.org/10.1038/srep31900 |
| primary_location.id | doi:10.1038/srep31900 |
| primary_location.is_oa | True |
| primary_location.source.id | https://openalex.org/S196734849 |
| primary_location.source.issn | 2045-2322 |
| primary_location.source.type | journal |
| primary_location.source.is_oa | True |
| primary_location.source.issn_l | 2045-2322 |
| primary_location.source.is_core | True |
| primary_location.source.is_in_doaj | True |
| primary_location.source.display_name | Scientific Reports |
| primary_location.source.host_organization | https://openalex.org/P4310319908 |
| primary_location.source.host_organization_name | Nature Portfolio |
| primary_location.source.host_organization_lineage | https://openalex.org/P4310319908, https://openalex.org/P4310319965 |
| primary_location.source.host_organization_lineage_names | Nature Portfolio, Springer Nature |
| primary_location.license | cc-by |
| primary_location.pdf_url | https://www.nature.com/articles/srep31900.pdf |
| primary_location.version | publishedVersion |
| primary_location.raw_type | journal-article |
| primary_location.license_id | https://openalex.org/licenses/cc-by |
| primary_location.is_accepted | True |
| primary_location.is_published | True |
| primary_location.raw_source_name | Scientific Reports |
| primary_location.landing_page_url | https://doi.org/10.1038/srep31900 |
| publication_date | 2016-08-30 |
| publication_year | 2016 |
| referenced_works | https://openalex.org/W2127230663, https://openalex.org/W2157888653, https://openalex.org/W2082825869, https://openalex.org/W2009119978, https://openalex.org/W1982579644, https://openalex.org/W1579534339, https://openalex.org/W2160177274, https://openalex.org/W2110145781, https://openalex.org/W2139306346, https://openalex.org/W2076163156, https://openalex.org/W1778776476, https://openalex.org/W1983403167, https://openalex.org/W2168531624, https://openalex.org/W1974640383, https://openalex.org/W2011246380, https://openalex.org/W2041126213, https://openalex.org/W2105067980, https://openalex.org/W2156104322, https://openalex.org/W2136651963, https://openalex.org/W2096634299, https://openalex.org/W2115501618, https://openalex.org/W1550594300, https://openalex.org/W2144662851, https://openalex.org/W344138311, https://openalex.org/W2097529842, https://openalex.org/W2107282968, https://openalex.org/W2137759177, https://openalex.org/W2087064593, https://openalex.org/W1840547926, https://openalex.org/W2107772251, https://openalex.org/W1975668265, https://openalex.org/W2025361601, https://openalex.org/W2096195187, https://openalex.org/W4247388812, https://openalex.org/W2485161901, https://openalex.org/W4245096620, https://openalex.org/W2165460636, https://openalex.org/W2133531097, https://openalex.org/W2178173465, https://openalex.org/W2130530163, https://openalex.org/W2163584430, https://openalex.org/W2118738058, https://openalex.org/W2022496007, https://openalex.org/W2120902911, https://openalex.org/W2129933858 |
| referenced_works_count | 45 |
| abstract_inverted_index | |
| cited_by_percentile_year.max | 100 |
| cited_by_percentile_year.min | 99 |
| countries_distinct_count | 2 |
| institutions_distinct_count | 5 |
| citation_normalized_percentile.value | 0.99658227 |
| citation_normalized_percentile.is_in_top_1_percent | True |
| citation_normalized_percentile.is_in_top_10_percent | True |