Dissecting the genetic admixture and forensic signatures of ethnolinguistically diverse Chinese populations via a 114-plex NGS InDel panel Article Swipe
Chengliang Yang
,
Changhui Liu
,
Miaoqiang Lun
,
Xiaohong Chen
,
Quyi Xu
,
Xueyuan Liu
,
Meiyun He
,
Linying Ye
,
Guanglin He
,
Mengge Wang
,
Chao Liu
·
YOU?
·
· 2024
· Open Access
·
· DOI: https://doi.org/10.1186/s12864-024-10894-y
YOU?
·
· 2024
· Open Access
·
· DOI: https://doi.org/10.1186/s12864-024-10894-y
Comprehensive characterizations of genetic diversity and demographic models of ethnolinguistically diverse Chinese populations are essential for elucidating their forensic characteristics and evolutionary past. We developed a 114-plex NGS InDel panel to genotype 114 genome-wide markers and investigated the genetic structures of Zhuang, Hui, Miao, Li, Tibetan, Yi, and Mongolian populations, encompassing five language families. This panel demonstrated robust performance, with exceptional potential for forensic individual identification and paternity testing, evidenced by the combined power of discrimination for 77 autosomal InDels (ranged from 1-3.6400 × 10-30 to 1-3.5713 × 10-32) and the combined power of exclusion (ranged from 1-2.1863 × 10-6 to 1-2.1261 × 10-7). The cumulative mean exclusion chance for 32 X-chromosomal InDels varied between 0.99996 and 0.99999 for trios and 0.99760 to 0.99898 for duos. We also analyzed genetic similarities and differences between these populations and 27 global populations, revealing distinct clusters among African, South Asian, East Asian, and European groups, with a close genetic affinity to East Asians. Notably, we identified geography-related genetic substructures: Inner Mongolia Mongolians and Gansu Huis formed a northern branch, Tibetans and Yis from Sichuan constituted a highland branch, and Guangxi Zhuangs exhibited close ties with Hainan Lis and Guangxi Miaos in the southern branch. Additionally, many InDels proved to be ancestry-informative markers for biogeographic ancestry inference. Collectively, these findings underscore the utility of the 114-plex NGS InDel panel as a complementary tool for forensic investigations and as a source of insights into the genetic architecture of ethnolinguistically distinct Chinese populations.
Related Topics
Concepts
Indel
Biology
Forensic science
Genetics
Evolutionary biology
Forensic genetics
Computational biology
Gene
Single-nucleotide polymorphism
Genotype
Microsatellite
Allele
Metadata
- Type
- article
- Language
- en
- Landing Page
- https://doi.org/10.1186/s12864-024-10894-y
- OA Status
- gold
- References
- 66
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W4404668869
All OpenAlex metadata
Raw OpenAlex JSON
- OpenAlex ID
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https://openalex.org/W4404668869Canonical identifier for this work in OpenAlex
- DOI
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https://doi.org/10.1186/s12864-024-10894-yDigital Object Identifier
- Title
-
Dissecting the genetic admixture and forensic signatures of ethnolinguistically diverse Chinese populations via a 114-plex NGS InDel panelWork title
- Type
-
articleOpenAlex work type
- Language
-
enPrimary language
- Publication year
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2024Year of publication
- Publication date
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2024-11-25Full publication date if available
- Authors
-
Chengliang Yang, Changhui Liu, Miaoqiang Lun, Xiaohong Chen, Quyi Xu, Xueyuan Liu, Meiyun He, Linying Ye, Guanglin He, Mengge Wang, Chao LiuList of authors in order
- Landing page
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https://doi.org/10.1186/s12864-024-10894-yPublisher landing page
- Open access
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YesWhether a free full text is available
- OA status
-
goldOpen access status per OpenAlex
- OA URL
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https://doi.org/10.1186/s12864-024-10894-yDirect OA link when available
- Concepts
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Indel, Biology, Forensic science, Genetics, Evolutionary biology, Forensic genetics, Computational biology, Gene, Single-nucleotide polymorphism, Genotype, Microsatellite, AlleleTop concepts (fields/topics) attached by OpenAlex
- Cited by
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0Total citation count in OpenAlex
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66Number of works referenced by this work
- Related works (count)
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10Other works algorithmically related by OpenAlex
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| abstract_inverted_index.testing, | 68 |
| abstract_inverted_index.Mongolian | 48 |
| abstract_inverted_index.autosomal | 78 |
| abstract_inverted_index.developed | 24 |
| abstract_inverted_index.diversity | 4 |
| abstract_inverted_index.essential | 14 |
| abstract_inverted_index.evidenced | 69 |
| abstract_inverted_index.exclusion | 94, 107 |
| abstract_inverted_index.exhibited | 188 |
| abstract_inverted_index.families. | 53 |
| abstract_inverted_index.paternity | 67 |
| abstract_inverted_index.potential | 61 |
| abstract_inverted_index.revealing | 140 |
| abstract_inverted_index.Mongolians | 168 |
| abstract_inverted_index.cumulative | 105 |
| abstract_inverted_index.identified | 162 |
| abstract_inverted_index.individual | 64 |
| abstract_inverted_index.inference. | 212 |
| abstract_inverted_index.structures | 39 |
| abstract_inverted_index.underscore | 216 |
| abstract_inverted_index.constituted | 181 |
| abstract_inverted_index.demographic | 6 |
| abstract_inverted_index.differences | 132 |
| abstract_inverted_index.elucidating | 16 |
| abstract_inverted_index.exceptional | 60 |
| abstract_inverted_index.genome-wide | 33 |
| abstract_inverted_index.populations | 12, 135 |
| abstract_inverted_index.architecture | 241 |
| abstract_inverted_index.demonstrated | 56 |
| abstract_inverted_index.encompassing | 50 |
| abstract_inverted_index.evolutionary | 21 |
| abstract_inverted_index.investigated | 36 |
| abstract_inverted_index.performance, | 58 |
| abstract_inverted_index.populations, | 49, 139 |
| abstract_inverted_index.populations. | 246 |
| abstract_inverted_index.similarities | 130 |
| abstract_inverted_index.Additionally, | 201 |
| abstract_inverted_index.Collectively, | 213 |
| abstract_inverted_index.Comprehensive | 0 |
| abstract_inverted_index.X-chromosomal | 111 |
| abstract_inverted_index.biogeographic | 210 |
| abstract_inverted_index.complementary | 227 |
| abstract_inverted_index.discrimination | 75 |
| abstract_inverted_index.identification | 65 |
| abstract_inverted_index.investigations | 231 |
| abstract_inverted_index.substructures: | 165 |
| abstract_inverted_index.10<sup>-6</sup> | 99 |
| abstract_inverted_index.characteristics | 19 |
| abstract_inverted_index.10<sup>-30</sup> | 84 |
| abstract_inverted_index.10<sup>-32</sup>) | 88 |
| abstract_inverted_index.10<sup>-7</sup>). | 103 |
| abstract_inverted_index.characterizations | 1 |
| abstract_inverted_index.geography-related | 163 |
| abstract_inverted_index.ethnolinguistically | 9, 243 |
| abstract_inverted_index.ancestry-informative | 207 |
| cited_by_percentile_year | |
| corresponding_author_ids | https://openalex.org/A5057959962 |
| countries_distinct_count | 1 |
| institutions_distinct_count | 11 |
| citation_normalized_percentile.value | 0.2855921 |
| citation_normalized_percentile.is_in_top_1_percent | False |
| citation_normalized_percentile.is_in_top_10_percent | False |