Eddy current-induced artifacts correction in high gradient strength diffusion MRI with dynamic field monitoring: demonstration in ex vivo human brain imaging Article Swipe
Gabriel Ramos‐Llordén
,
Daniel Park
,
John E. Kirsch
,
Alina Scholz
,
Boris Keil
,
Chiara Maffei
,
Hong‐Hsi Lee
,
Berkin Bilgiç
,
Brian L. Edlow
,
Choukri Mekkaoui
,
Anastasia Yendiki
,
Thomas Witzel
,
Susie Y. Huang
·
YOU?
·
· 2023
· Open Access
·
· DOI: https://doi.org/10.1101/2023.02.15.528684
YOU?
·
· 2023
· Open Access
·
· DOI: https://doi.org/10.1101/2023.02.15.528684
Purpose To demonstrate the advantages of spatiotemporal magnetic field monitoring to correct eddy current-induced artifacts (ghosting and geometric distortions) in high gradient strength diffusion MRI (dMRI). Methods A dynamic field camera with 16 NMR field probes was used to characterize eddy current fields induced from diffusion gradients for different gradients strengths (up to 300 mT/m), diffusion directions, and shots in a 3D multi-shot EPI sequence on a 3T Connectom scanner. The efficacy of dynamic field monitoring-based image reconstruction was demonstrated on high-resolution whole brain ex vivo dMRI. A 3D multi-shot image reconstruction framework was informed with the actual nonlinear phase evolution measured with the dynamic field camera, thereby accounting for high-order eddy currents fields on top of the image encoding gradients in the image formation model. Results Eddy current fields from diffusion gradients at high gradient strength in a 3T Connectom scanner are highly nonlinear in space and time, inducing high-order spatial phase modulations between odd/even echoes and shots that are not static during the readout. Superior reduction of ghosting and geometric distortion was achieved with dynamic field monitoring compared to ghosting approaches such as navigator- and structured low-rank-based methods or MUSE, followed by image-based distortion correction with eddy. Improved dMRI analysis is demonstrated with diffusion tensor imaging and high-angular resolution diffusion imaging. Conclusion Strong eddy current artifacts characteristic of high gradient strength dMRI can be well corrected with dynamic field monitoring-based image reconstruction, unlike the two-step approach consisting of ghosting correction followed by geometric distortion reduction with eddy.
Related Topics
Concepts
Ex vivo
Eddy current
Nuclear magnetic resonance
Diffusion MRI
Diffusion
Diffusion imaging
Current (fluid)
Field (mathematics)
Materials science
Biomedical engineering
Magnetic resonance imaging
Physics
In vivo
Medicine
Radiology
Biology
Mathematics
Thermodynamics
Pure mathematics
Biotechnology
Quantum mechanics
Metadata
- Type
- preprint
- Language
- en
- Landing Page
- https://doi.org/10.1101/2023.02.15.528684
- https://www.biorxiv.org/content/biorxiv/early/2023/02/16/2023.02.15.528684.full.pdf
- OA Status
- green
- Cited By
- 1
- References
- 82
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W4321033158
All OpenAlex metadata
Raw OpenAlex JSON
- OpenAlex ID
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https://openalex.org/W4321033158Canonical identifier for this work in OpenAlex
- DOI
-
https://doi.org/10.1101/2023.02.15.528684Digital Object Identifier
- Title
-
Eddy current-induced artifacts correction in high gradient strength diffusion MRI with dynamic field monitoring: demonstration in ex vivo human brain imagingWork title
- Type
-
preprintOpenAlex work type
- Language
-
enPrimary language
- Publication year
-
2023Year of publication
- Publication date
-
2023-02-16Full publication date if available
- Authors
-
Gabriel Ramos‐Llordén, Daniel Park, John E. Kirsch, Alina Scholz, Boris Keil, Chiara Maffei, Hong‐Hsi Lee, Berkin Bilgiç, Brian L. Edlow, Choukri Mekkaoui, Anastasia Yendiki, Thomas Witzel, Susie Y. HuangList of authors in order
- Landing page
-
https://doi.org/10.1101/2023.02.15.528684Publisher landing page
- PDF URL
-
https://www.biorxiv.org/content/biorxiv/early/2023/02/16/2023.02.15.528684.full.pdfDirect link to full text PDF
- Open access
-
YesWhether a free full text is available
- OA status
-
greenOpen access status per OpenAlex
- OA URL
-
https://www.biorxiv.org/content/biorxiv/early/2023/02/16/2023.02.15.528684.full.pdfDirect OA link when available
- Concepts
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Ex vivo, Eddy current, Nuclear magnetic resonance, Diffusion MRI, Diffusion, Diffusion imaging, Current (fluid), Field (mathematics), Materials science, Biomedical engineering, Magnetic resonance imaging, Physics, In vivo, Medicine, Radiology, Biology, Mathematics, Thermodynamics, Pure mathematics, Biotechnology, Quantum mechanicsTop concepts (fields/topics) attached by OpenAlex
- Cited by
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1Total citation count in OpenAlex
- Citations by year (recent)
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2023: 1Per-year citation counts (last 5 years)
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82Number of works referenced by this work
- Related works (count)
-
10Other works algorithmically related by OpenAlex
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