Effects of Alterations of Post-Mortem Delay and Other Tissue-Collection Variables on Metabolite Levels in Human and Rat Brain Article Swipe
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· 2020
· Open Access
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· DOI: https://doi.org/10.3390/metabo10110438
The use of post-mortem human tissue is indispensable in studies investigating alterations in metabolite levels in neurodegenerative conditions such as Alzheimer’s disease (AD). However, variability between samples may have unknown effects on metabolite concentrations. The aim of this study was to characterize the impact of such variables. Cingulate gyrus was obtained from AD cases and controls, from three brain banks. Gas chromatography-mass spectrometry (GC-MS) was used to measure and compare the levels of 66 identifiable metabolites in these tissues to determine effects of tissue-collection variables. The effect of PMD was further investigated by analysis of rat brain cortex and cerebellum collected following post-mortem delays (PMDs) of zero to 72 h. Metabolite levels between cases and controls were not replicable across cohorts with variable age- and gender-matching, PMD, and control Braak staging. Analysis of rat tissues found significant effects of PMD on 31 of 63 identified metabolites over periods up to 72 h. PMD must be kept under 24 h for metabolomics analyses on brain tissues to yield replicable results. Tissues should also be well age- and gender-matched, and Braak stage in controls should be kept to a minimum in order to minimize the impact of these variables in influencing metabolite variability.
Related Topics
- Type
- article
- Language
- en
- Landing Page
- https://doi.org/10.3390/metabo10110438
- https://www.mdpi.com/2218-1989/10/11/438/pdf?version=1604029342
- OA Status
- gold
- Cited By
- 20
- References
- 26
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W3097066069
Raw OpenAlex JSON
- OpenAlex ID
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https://openalex.org/W3097066069Canonical identifier for this work in OpenAlex
- DOI
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https://doi.org/10.3390/metabo10110438Digital Object Identifier
- Title
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Effects of Alterations of Post-Mortem Delay and Other Tissue-Collection Variables on Metabolite Levels in Human and Rat BrainWork title
- Type
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articleOpenAlex work type
- Language
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enPrimary language
- Publication year
-
2020Year of publication
- Publication date
-
2020-10-29Full publication date if available
- Authors
-
Melissa Scholefield, Stephanie J. Church, Jingshu Xu, Andrew Robinson, Natalie J. Gardiner, Federico Roncaroli, Nigel M. Hooper, Richard D. Unwin, Garth J. S. CooperList of authors in order
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https://doi.org/10.3390/metabo10110438Publisher landing page
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https://www.mdpi.com/2218-1989/10/11/438/pdf?version=1604029342Direct link to full text PDF
- Open access
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YesWhether a free full text is available
- OA status
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goldOpen access status per OpenAlex
- OA URL
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https://www.mdpi.com/2218-1989/10/11/438/pdf?version=1604029342Direct OA link when available
- Concepts
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Metabolite, Human brain, Chemistry, Neuroscience, Physiology, Medicine, Biology, Internal medicineTop concepts (fields/topics) attached by OpenAlex
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20Total citation count in OpenAlex
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2025: 2, 2024: 5, 2023: 6, 2022: 3, 2021: 4Per-year citation counts (last 5 years)
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26Number of works referenced by this work
- Related works (count)
-
10Other works algorithmically related by OpenAlex
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| abstract_inverted_index.metabolomics | 160 |
| abstract_inverted_index.spectrometry | 62 |
| abstract_inverted_index.variability. | 200 |
| abstract_inverted_index.Alzheimer’s | 20 |
| abstract_inverted_index.indispensable | 7 |
| abstract_inverted_index.investigating | 10 |
| abstract_inverted_index.concentrations. | 33 |
| abstract_inverted_index.gender-matched, | 176 |
| abstract_inverted_index.gender-matching, | 125 |
| abstract_inverted_index.neurodegenerative | 16 |
| abstract_inverted_index.tissue-collection | 83 |
| abstract_inverted_index.chromatography-mass | 61 |
| cited_by_percentile_year.max | 98 |
| cited_by_percentile_year.min | 95 |
| corresponding_author_ids | https://openalex.org/A5029480517 |
| countries_distinct_count | 2 |
| institutions_distinct_count | 9 |
| corresponding_institution_ids | https://openalex.org/I2799725268, https://openalex.org/I28407311 |
| sustainable_development_goals[0].id | https://metadata.un.org/sdg/3 |
| sustainable_development_goals[0].score | 0.4000000059604645 |
| sustainable_development_goals[0].display_name | Good health and well-being |
| citation_normalized_percentile.value | 0.78255507 |
| citation_normalized_percentile.is_in_top_1_percent | False |
| citation_normalized_percentile.is_in_top_10_percent | False |