Epigenetic marks or not? The discovery of novel DNA modifications in eukaryotes Article Swipe
Wei‐Ying Meng
,
Zixin Wang
,
Yunfang Zhang
,
Yujun Hou
,
Jianhuang Xue
·
YOU?
·
· 2024
· Open Access
·
· DOI: https://doi.org/10.1016/j.jbc.2024.106791
YOU?
·
· 2024
· Open Access
·
· DOI: https://doi.org/10.1016/j.jbc.2024.106791
DNA modifications add another layer of complexity to the eukaryotic genome to regulate gene expression, playing critical roles as epigenetic marks. In eukaryotes, the study of DNA epigenetic modifications has been confined to 5mC and its derivatives for decades. However, rapid developing approaches have witnessed the expansion of DNA modification reservoirs during the past several years, including the identification of 6mA, 5gmC, 4mC, and 4acC in diverse organisms. However, whether these DNA modifications function as epigenetic marks requires careful consideration. In this review, we try to present a panorama of all the DNA epigenetic modifications in eukaryotes, emphasizing recent breakthroughs in the identification of novel DNA modifications. The characterization of their roles in transcriptional regulation as potential epigenetic marks is summarized. More importantly, the pathways for generating or eliminating these DNA modifications, as well as the proteins involved are comprehensively dissected. Furthermore, we briefly discuss the potential challenges and perspectives, which should be taken into account while investigating novel DNA modifications.
Related Topics
Concepts
Epigenetics
Biology
Computational biology
DNA
DNA methylation
Chromatin
Genome
Genetics
Epigenesis
Epigenomics
Gene
Gene expression
Metadata
- Type
- review
- Language
- en
- Landing Page
- https://doi.org/10.1016/j.jbc.2024.106791
- OA Status
- gold
- Cited By
- 12
- References
- 148
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W4392094188
All OpenAlex metadata
Raw OpenAlex JSON
- OpenAlex ID
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https://openalex.org/W4392094188Canonical identifier for this work in OpenAlex
- DOI
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https://doi.org/10.1016/j.jbc.2024.106791Digital Object Identifier
- Title
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Epigenetic marks or not? The discovery of novel DNA modifications in eukaryotesWork title
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reviewOpenAlex work type
- Language
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enPrimary language
- Publication year
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2024Year of publication
- Publication date
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2024-02-23Full publication date if available
- Authors
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Wei‐Ying Meng, Zixin Wang, Yunfang Zhang, Yujun Hou, Jianhuang XueList of authors in order
- Landing page
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https://doi.org/10.1016/j.jbc.2024.106791Publisher landing page
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YesWhether a free full text is available
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goldOpen access status per OpenAlex
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https://doi.org/10.1016/j.jbc.2024.106791Direct OA link when available
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Epigenetics, Biology, Computational biology, DNA, DNA methylation, Chromatin, Genome, Genetics, Epigenesis, Epigenomics, Gene, Gene expressionTop concepts (fields/topics) attached by OpenAlex
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12Total citation count in OpenAlex
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2025: 10, 2024: 2Per-year citation counts (last 5 years)
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10Other works algorithmically related by OpenAlex
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| abstract_inverted_index.perspectives, | 149 |
| abstract_inverted_index.consideration. | 79 |
| abstract_inverted_index.identification | 58, 102 |
| abstract_inverted_index.modifications, | 131 |
| abstract_inverted_index.modifications. | 106, 160 |
| abstract_inverted_index.comprehensively | 139 |
| abstract_inverted_index.transcriptional | 113 |
| abstract_inverted_index.characterization | 108 |
| cited_by_percentile_year.max | 99 |
| cited_by_percentile_year.min | 94 |
| countries_distinct_count | 1 |
| institutions_distinct_count | 5 |
| sustainable_development_goals[0].id | https://metadata.un.org/sdg/2 |
| sustainable_development_goals[0].score | 0.47999998927116394 |
| sustainable_development_goals[0].display_name | Zero hunger |
| citation_normalized_percentile.value | 0.94119555 |
| citation_normalized_percentile.is_in_top_1_percent | False |
| citation_normalized_percentile.is_in_top_10_percent | True |