ESS-DIVE reporting format for leaf-level gas exchange data and metadata Article Swipe
Kim Ely
,
Alistair Rogers
,
Robert Crystal‐Ornelas
,
D. Agarwal
,
Ainsworth Elizabeth
,
Loren P. Albert
,
Ashehad A. Ali
,
Jeremiah Anderson
,
Michael J. Aspinwall
,
Chandra Bellasio
,
Carl J. Bernacchi
,
Steve Bonnage
,
Thomas N. Buckley
,
James A. Bunce
,
Angela C. Burnett
,
Florian A. Busch
,
Amanda P. Cavanagh
,
Lucas A. Cernusak
,
Joan Damerow
,
Kenneth Davidson
,
Martin G. De Kauwe
,
Michael C. Dietze
,
Tomas F. Domingues
,
Mirindi Eric Dusenge
,
David S. Ellsworth
,
John Evans
,
P. M. Gauthier
,
Bruno Gimenez
,
Elizabeth Gordón
,
Christopher M. Gough
,
Aud H. Halbritter
,
DAVID HANSON
,
Mary Heskel
,
Aaron Hogan
,
Jason Hupp
,
Kolby Jardine
,
Jens Kattge
,
Trevor F. Keenan
,
Johannes Kromdijk
,
Dushan Kumarathunge
,
Julien Lamour
,
Andrew D. B. Leakey
,
David LeBauer
,
Qianyu Li
,
Marjorie R. Lundgren
,
Nate G. McDowell
,
Katherine Meacham‐Hensold
,
Belinda E. Medlyn
,
David J. Moore
,
Robinson Negrón‐Juárez
,
Ülo Niinemets
,
Colin Osborne
,
Alexandria L. Pivovaroff
,
Hendrik Porter
,
Sasha C. Reed
,
Youngryel Ryu
,
Álvaro Sanz‐Sáez
,
Stephanie C. Schmiege
,
Shawn Serbin
,
Thomas D. Sharkey
,
Martijn Slot
,
Nicholas Smith
,
Balasaheb Sonewane
,
Paul M. South
,
Daisy Souza
,
Joseph R. Stinziano
,
Ellen Stuart‐Haëntjens
,
Samuel H. Taylor
,
Mauricio Tejera‐Nieves
,
Johan Uddling
,
Vigdis Vandik
,
Charuleka Varadharajan
,
Anthony P. Walker
,
Berkley J. Walker
,
J. M. Warren
,
Danielle A. Way
,
Brett T. Wolfe
,
Jin Wu
,
Stan D. Wullschleger
,
Chonggang Xu
,
Dedi Yang
,
Zhengbing Yan
·
YOU?
·
· 2020
· Open Access
·
· DOI: https://doi.org/10.15485/1659484
YOU?
·
· 2020
· Open Access
·
· DOI: https://doi.org/10.15485/1659484
Here we present documentation of the ESS-DIVE reporting format for leaf-level gas exchange data and metadata. This reporting format provides guidance to data contributors on how to store data to maximize their discoverability, facilitate their efficient reuse, and add value to individual datasets. For data users, the reporting format will better allow data repositories to optimize data search and extraction, and more readily integrate similar data into harmonized synthesis products. The reporting format specifies data table variable naming and unit conventions, as well as metadata characterizing experimental conditions and protocols. For common data types that were the focus of this initial version of the reporting format, i.e., survey measurements, dark respiration, carbon dioxide and light response curves, and parameters derived from those measurements, we took a further step of defining required additional data that would maximize the potential reuse of those data types. To aid data contributors and the development of data ingest tools by data repositories we provided a translation table comparing the outputs of common gas exchange instruments. The reporting format presented here is intended to form a foundation for future development that will incorporate additional data types and variables as gas exchange systems and measurement approaches advance in the future. The reporting format documentation is maintained and updated on the ESS-DIVE Community Space GitHub. This data package is the first published version of this reporting format, and comprises a zip file of the complete content of https://github.com/ess-dive-community/essdive-leaf-gas-exchange v1.0. The zip contains the reporting format description, guidelines, variable tables and instructions in GitHub markdown language (*.md) and 2 metadata templates as spreadsheets with drop down options (*.xlsx files, also function in GoogleSheets).
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ESS-DIVE reporting format for leaf-level gas exchange data and metadataWork title
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datasetOpenAlex work type
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enPrimary language
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2020Year of publication
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2020-01-01Full publication date if available
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Kim Ely, Alistair Rogers, Robert Crystal‐Ornelas, D. Agarwal, Ainsworth Elizabeth, Loren P. Albert, Ashehad A. Ali, Jeremiah Anderson, Michael J. Aspinwall, Chandra Bellasio, Carl J. Bernacchi, Steve Bonnage, Thomas N. Buckley, James A. Bunce, Angela C. Burnett, Florian A. Busch, Amanda P. Cavanagh, Lucas A. Cernusak, Joan Damerow, Kenneth Davidson, Martin G. De Kauwe, Michael C. Dietze, Tomas F. Domingues, Mirindi Eric Dusenge, David S. Ellsworth, John Evans, P. M. Gauthier, Bruno Gimenez, Elizabeth Gordón, Christopher M. Gough, Aud H. Halbritter, DAVID HANSON, Mary Heskel, Aaron Hogan, Jason Hupp, Kolby Jardine, Jens Kattge, Trevor F. Keenan, Johannes Kromdijk, Dushan Kumarathunge, Julien Lamour, Andrew D. B. Leakey, David LeBauer, Qianyu Li, Marjorie R. Lundgren, Nate G. McDowell, Katherine Meacham‐Hensold, Belinda E. Medlyn, David J. Moore, Robinson Negrón‐Juárez, Ülo Niinemets, Colin Osborne, Alexandria L. Pivovaroff, Hendrik Porter, Sasha C. Reed, Youngryel Ryu, Álvaro Sanz‐Sáez, Stephanie C. Schmiege, Shawn Serbin, Thomas D. Sharkey, Martijn Slot, Nicholas Smith, Balasaheb Sonewane, Paul M. South, Daisy Souza, Joseph R. Stinziano, Ellen Stuart‐Haëntjens, Samuel H. Taylor, Mauricio Tejera‐Nieves, Johan Uddling, Vigdis Vandik, Charuleka Varadharajan, Anthony P. Walker, Berkley J. Walker, J. M. Warren, Danielle A. Way, Brett T. Wolfe, Jin Wu, Stan D. Wullschleger, Chonggang Xu, Dedi Yang, Zhengbing YanList of authors in order
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| abstract_inverted_index.ESS-DIVE | 6, 213 |
| abstract_inverted_index.complete | 236 |
| abstract_inverted_index.contains | 243 |
| abstract_inverted_index.defining | 129 |
| abstract_inverted_index.exchange | 12, 168, 194 |
| abstract_inverted_index.function | 271 |
| abstract_inverted_index.guidance | 20 |
| abstract_inverted_index.intended | 176 |
| abstract_inverted_index.language | 256 |
| abstract_inverted_index.markdown | 255 |
| abstract_inverted_index.maximize | 30, 135 |
| abstract_inverted_index.metadata | 84, 260 |
| abstract_inverted_index.optimize | 55 |
| abstract_inverted_index.provided | 158 |
| abstract_inverted_index.provides | 19 |
| abstract_inverted_index.required | 130 |
| abstract_inverted_index.response | 115 |
| abstract_inverted_index.variable | 76, 249 |
| abstract_inverted_index.Community | 214 |
| abstract_inverted_index.comparing | 162 |
| abstract_inverted_index.comprises | 230 |
| abstract_inverted_index.datasets. | 42 |
| abstract_inverted_index.efficient | 35 |
| abstract_inverted_index.integrate | 63 |
| abstract_inverted_index.metadata. | 15 |
| abstract_inverted_index.potential | 137 |
| abstract_inverted_index.presented | 173 |
| abstract_inverted_index.products. | 69 |
| abstract_inverted_index.published | 223 |
| abstract_inverted_index.reporting | 7, 17, 47, 71, 104, 171, 204, 227, 245 |
| abstract_inverted_index.specifies | 73 |
| abstract_inverted_index.synthesis | 68 |
| abstract_inverted_index.templates | 261 |
| abstract_inverted_index.variables | 191 |
| abstract_inverted_index.additional | 131, 187 |
| abstract_inverted_index.approaches | 198 |
| abstract_inverted_index.conditions | 87 |
| abstract_inverted_index.facilitate | 33 |
| abstract_inverted_index.foundation | 180 |
| abstract_inverted_index.harmonized | 67 |
| abstract_inverted_index.individual | 41 |
| abstract_inverted_index.leaf-level | 10 |
| abstract_inverted_index.maintained | 208 |
| abstract_inverted_index.parameters | 118 |
| abstract_inverted_index.protocols. | 89 |
| abstract_inverted_index.development | 149, 183 |
| abstract_inverted_index.extraction, | 59 |
| abstract_inverted_index.guidelines, | 248 |
| abstract_inverted_index.incorporate | 186 |
| abstract_inverted_index.measurement | 197 |
| abstract_inverted_index.translation | 160 |
| abstract_inverted_index.contributors | 23, 146 |
| abstract_inverted_index.conventions, | 80 |
| abstract_inverted_index.description, | 247 |
| abstract_inverted_index.experimental | 86 |
| abstract_inverted_index.instructions | 252 |
| abstract_inverted_index.instruments. | 169 |
| abstract_inverted_index.repositories | 53, 156 |
| abstract_inverted_index.respiration, | 110 |
| abstract_inverted_index.spreadsheets | 263 |
| abstract_inverted_index.documentation | 3, 206 |
| abstract_inverted_index.measurements, | 108, 122 |
| abstract_inverted_index.GoogleSheets). | 273 |
| abstract_inverted_index.characterizing | 85 |
| abstract_inverted_index.discoverability, | 32 |
| abstract_inverted_index.https://github.com/ess-dive-community/essdive-leaf-gas-exchange | 239 |
| cited_by_percentile_year | |
| countries_distinct_count | 12 |
| institutions_distinct_count | 82 |
| citation_normalized_percentile |