Evolution of crop phenotypic spaces through domestication Article Swipe
Arthur Wojcik
,
Harry Belcram
,
Agnès Rousselet
,
Mathieu Bouet
,
Marie Brault
,
Pierre Serin
,
Augustin Desprez
,
Renaud Rincent
,
Andreas Peil
,
Karine Henry
,
C. Marchal
,
Thierry Lacombe
,
Sylvain Glémin
,
Karine Alix
,
P. Gérard
,
Doménica Manicacci
,
Yves Vigouroux
,
Catherine Dogimont
,
Maud I. Tenaillon
·
YOU?
·
· 2025
· Open Access
·
· DOI: https://doi.org/10.1101/2025.10.11.681794
YOU?
·
· 2025
· Open Access
·
· DOI: https://doi.org/10.1101/2025.10.11.681794
Summary We used domestication as an in vivo replicated experiment to investigate how divergent selection has shaped the evolution of multivariate phenotypic spaces. We measured 11 to 57 qualitative and quantitative traits in 13 species, either unique or shared between species, and established a framework for cross-species comparisons. Our results revealed significant convergence that translated into a cross-species domestication syndrome. Most species exhibited a reduction of the multivariate phenotypic space during domestication. We demonstrated that Near Infrared spectra measured on leaves evolve through processes unrelated with domestication, enabling its use as a control for sampling effects across species. Building on this, we developed a multivariate Phenotypic Divergence Index (mPDI) to rank species by the extent of phenotypic divergence under domestication. We found a high disjunction of wild and domestic phenotypic spaces in all species. Neither the mPDI nor the relative size of wild versus domestic multivariate phenotypic spaces was influenced by the domestication timing or mating system. Lastly, we observed a progressive decoupling of trait correlations with increasing time since domestication. In addition to introducing a new index that can be applied across species for comparative purposes, our study uncovers recurring patterns shared among species, pointing to general principles underlying plant domestication.
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Metadata
- Type
- preprint
- Language
- en
- Landing Page
- https://doi.org/10.1101/2025.10.11.681794
- https://www.biorxiv.org/content/biorxiv/early/2025/10/11/2025.10.11.681794.full.pdf
- OA Status
- green
- References
- 113
- OpenAlex ID
- https://openalex.org/W4415083298
All OpenAlex metadata
Raw OpenAlex JSON
- OpenAlex ID
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https://openalex.org/W4415083298Canonical identifier for this work in OpenAlex
- DOI
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https://doi.org/10.1101/2025.10.11.681794Digital Object Identifier
- Title
-
Evolution of crop phenotypic spaces through domesticationWork title
- Type
-
preprintOpenAlex work type
- Language
-
enPrimary language
- Publication year
-
2025Year of publication
- Publication date
-
2025-10-11Full publication date if available
- Authors
-
Arthur Wojcik, Harry Belcram, Agnès Rousselet, Mathieu Bouet, Marie Brault, Pierre Serin, Augustin Desprez, Renaud Rincent, Andreas Peil, Karine Henry, C. Marchal, Thierry Lacombe, Sylvain Glémin, Karine Alix, P. Gérard, Doménica Manicacci, Yves Vigouroux, Catherine Dogimont, Maud I. TenaillonList of authors in order
- Landing page
-
https://doi.org/10.1101/2025.10.11.681794Publisher landing page
- PDF URL
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https://www.biorxiv.org/content/biorxiv/early/2025/10/11/2025.10.11.681794.full.pdfDirect link to full text PDF
- Open access
-
YesWhether a free full text is available
- OA status
-
greenOpen access status per OpenAlex
- OA URL
-
https://www.biorxiv.org/content/biorxiv/early/2025/10/11/2025.10.11.681794.full.pdfDirect OA link when available
- Cited by
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0Total citation count in OpenAlex
- References (count)
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113Number of works referenced by this work
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