Evolutionary and functional characterization of lagomorph guanylate-binding proteins: a story of gain and loss and shedding light on expression, localization and innate immunity-related functions Article Swipe
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· 2024
· Open Access
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· DOI: https://doi.org/10.3389/fimmu.2024.1303089
Guanylate binding proteins (GBPs) are an evolutionarily ancient family of proteins that are widely distributed among eukaryotes. They belong to the dynamin superfamily of GTPases, and their expression can be partially induced by interferons (IFNs). GBPs are involved in the cell-autonomous innate immune response against bacterial, parasitic and viral infections. Evolutionary studies have shown that GBPs exhibit a pattern of gene gain and loss events, indicative for the birth-and-death model of evolution. Most species harbor large GBP gene clusters that encode multiple paralogs. Previous functional and in-depth evolutionary studies have mainly focused on murine and human GBPs. Since rabbits are another important model system for studying human diseases, we focus here on lagomorphs to broaden our understanding of the multifunctional GBP protein family by conducting evolutionary analyses and performing a molecular and functional characterization of rabbit GBPs. We observed that lagomorphs lack GBP3, 6 and 7 . Furthermore, Leporidae experienced a loss of GBP2 , a unique duplication of GBP5 and a massive expansion of GBP4 . Gene expression analysis by reverse transcriptase quantitative polymerase chain reaction (RT-qPCR) and transcriptome data revealed that leporid GBP expression varied across tissues. Overexpressed rabbit GBPs localized either uniformly and/or discretely to the cytoplasm and/or to the nucleus. Oryctolagus cuniculus (oc)GBP5L1 and rarely ocGBP5L2 were an exception, colocalizing with the trans-Golgi network (TGN). In addition, four ocGBPs were IFN-inducible and only ocGBP5L2 inhibited furin activity. In conclusion, from an evolutionary perspective, lagomorph GBPs experienced multiple gain and loss events, and the molecular and functional characteristics of ocGBP suggest a role in innate immunity.
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- Type
- article
- Language
- en
- Landing Page
- https://doi.org/10.3389/fimmu.2024.1303089
- https://www.frontiersin.org/articles/10.3389/fimmu.2024.1303089/pdf?isPublishedV2=False
- OA Status
- gold
- Cited By
- 3
- References
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- OpenAlex ID
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- OpenAlex ID
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https://openalex.org/W4391320773Canonical identifier for this work in OpenAlex
- DOI
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https://doi.org/10.3389/fimmu.2024.1303089Digital Object Identifier
- Title
-
Evolutionary and functional characterization of lagomorph guanylate-binding proteins: a story of gain and loss and shedding light on expression, localization and innate immunity-related functionsWork title
- Type
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articleOpenAlex work type
- Language
-
enPrimary language
- Publication year
-
2024Year of publication
- Publication date
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2024-01-29Full publication date if available
- Authors
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Luca Schelle, João Vasco Côrte‐Real, Sharmeen Fayyaz, Augusto del Pozo Ben, Margarita Shnipova, Moritz Petersen, Rishikesh Lotke, B. Menon, Dana Matzek, Lena Pfaff, Ana Pinheiro, João Pedro Marques, José Melo‐Ferreira, Bastian Popper, Pedro J. Esteves, Daniel Sauter, Joana Abrantes, Hanna‐Mari BaldaufList of authors in order
- Landing page
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https://doi.org/10.3389/fimmu.2024.1303089Publisher landing page
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https://www.frontiersin.org/articles/10.3389/fimmu.2024.1303089/pdf?isPublishedV2=FalseDirect link to full text PDF
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YesWhether a free full text is available
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goldOpen access status per OpenAlex
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https://www.frontiersin.org/articles/10.3389/fimmu.2024.1303089/pdf?isPublishedV2=FalseDirect OA link when available
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Innate immune system, Cell biology, Biology, Immunity, Function (biology), Expression (computer science), Chemistry, Immunology, Immune system, Computer science, Programming languageTop concepts (fields/topics) attached by OpenAlex
- Cited by
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3Total citation count in OpenAlex
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2025: 2, 2024: 1Per-year citation counts (last 5 years)
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66Number of works referenced by this work
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10Other works algorithmically related by OpenAlex
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