Evolutionary dynamics of repetitive elements and their relationship with genome size in Acrididae Article Swipe
Lina Zhao
,
Hao Yuan
,
Xuanzeng Liu
,
Huihui Chang
,
Xuan Jing
,
Yimeng Nie
,
Yuan Huang
·
YOU?
·
· 2024
· Open Access
·
· DOI: https://doi.org/10.1016/j.ygeno.2024.110971
YOU?
·
· 2024
· Open Access
·
· DOI: https://doi.org/10.1016/j.ygeno.2024.110971
It is widely accepted that repetitive elements (REs) represent the primary mechanism driving genome size variation across eukaryotes. The observed genome sizes and REs of 59 species within the Acrididae were obtained and characterized. The genome sizes observed ranged from 6.60 pg to 19.35 pg, while the proportion of REs varied from 57.92 % to 83.58 %. The primary contributors were identified as LTR (2.34 % ∼ 20.98 %) and LINEs (6.70 % ∼ 16.33 %). The results of ancestral reconstruction indicated that the proportion of REs in ancestral nodes was 69.53 %, which suggests that they have undergone extensive genome expansion or contraction. A significant positive correlation was identified between the proportion of REs and genome size. Transposable elements were found to account for approximately 41 % of the observed variation in genome size. Moreover, the LTR was identified as the most significant RE type in relation to genome size expansion within the Acrididae.
Related Topics
Concepts
Acrididae
Biology
Genome size
Evolutionary biology
Genome
Evolutionary dynamics
Repeated sequence
Dynamics (music)
Genetics
Ecology
Gene
Orthoptera
Demography
Population
Acoustics
Sociology
Physics
Metadata
- Type
- article
- Language
- en
- Landing Page
- https://doi.org/10.1016/j.ygeno.2024.110971
- OA Status
- gold
- Cited By
- 4
- References
- 101
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W4405008565
All OpenAlex metadata
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https://openalex.org/W4405008565Canonical identifier for this work in OpenAlex
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https://doi.org/10.1016/j.ygeno.2024.110971Digital Object Identifier
- Title
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Evolutionary dynamics of repetitive elements and their relationship with genome size in AcrididaeWork title
- Type
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articleOpenAlex work type
- Language
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enPrimary language
- Publication year
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2024Year of publication
- Publication date
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2024-12-05Full publication date if available
- Authors
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Lina Zhao, Hao Yuan, Xuanzeng Liu, Huihui Chang, Xuan Jing, Yimeng Nie, Yuan HuangList of authors in order
- Landing page
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https://doi.org/10.1016/j.ygeno.2024.110971Publisher landing page
- Open access
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YesWhether a free full text is available
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goldOpen access status per OpenAlex
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https://doi.org/10.1016/j.ygeno.2024.110971Direct OA link when available
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Acrididae, Biology, Genome size, Evolutionary biology, Genome, Evolutionary dynamics, Repeated sequence, Dynamics (music), Genetics, Ecology, Gene, Orthoptera, Demography, Population, Acoustics, Sociology, PhysicsTop concepts (fields/topics) attached by OpenAlex
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4Total citation count in OpenAlex
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2025: 4Per-year citation counts (last 5 years)
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10Other works algorithmically related by OpenAlex
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