Exome sequencing in individuals with congenital anomalies of the kidney and urinary tract (CAKUT): a single-center experience Article Swipe
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· 2022
· Open Access
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· DOI: https://doi.org/10.21203/rs.3.rs-2251540/v1
Individuals with congenital anomalies of the kidney and urinary tract (CAKUT) show a broad spectrum of malformations. CAKUT can occur in an isolated fashion or as part of a syndromic disorder and can lead to end-stage kidney failure. A monogenic cause can be identified in approximately 12% of affected individuals. This study investigated a single-center CAKUT cohort analyzed by exome sequencing (ES). Emphasis was placed on the question whether diagnostic yield differs between certain CAKUT phenotypes (e.g., bilateral kidney affection, unilateral kidney affection or only urinary tract affection). 86 unrelated individuals with CAKUT were categorized according to their phenotype and analyzed by ES to identify a monogenic cause. Prioritized variants were rated according to recommendations of the American College of Medical Genetics and Genomics and the Association for Clinical Genomic Science. Diagnostic yields of different phenotypic categories were compared. Clinical data were collected using a standardized questionnaire. In the study cohort, 7/86 individuals had a (likely) pathogenic variant in the genes PAX2, PBX1, EYA1 or SALL1. Additionally, in one individual, a 17q12 deletion syndrome (including HNF1B) was detected. 62 individuals had a kidney affection, which was bilateral in 36. All solved cases (8/86, 9%) had bilateral kidney affection (diagnostic yield in subcohort: 8/36, 22%). Although the diagnostic yield in CAKUT cohorts is low, our single-center experience argues, that, in individuals with bilateral kidney affection, monogenic burden is higher than in those with unilateral kidney or only urinary tract affection.
Related Topics
- Type
- preprint
- Language
- en
- Landing Page
- https://doi.org/10.21203/rs.3.rs-2251540/v1
- https://www.researchsquare.com/article/rs-2251540/latest.pdf
- OA Status
- gold
- References
- 27
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W4308843654
Raw OpenAlex JSON
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https://openalex.org/W4308843654Canonical identifier for this work in OpenAlex
- DOI
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https://doi.org/10.21203/rs.3.rs-2251540/v1Digital Object Identifier
- Title
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Exome sequencing in individuals with congenital anomalies of the kidney and urinary tract (CAKUT): a single-center experienceWork title
- Type
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preprintOpenAlex work type
- Language
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enPrimary language
- Publication year
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2022Year of publication
- Publication date
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2022-11-11Full publication date if available
- Authors
-
Julia Hoefele, Korbinian M. Riedhammer, Jasmina Ćomić, Velibor Tasić, Jovana Putnik, Nora Abazi‐Emini, Nataša Stajić, Thomas Meitinger, Valbona Nushi-Stavileci, Riccardo Berutti, Matthias C. Braunisch, Aleksandra ParipovićList of authors in order
- Landing page
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https://doi.org/10.21203/rs.3.rs-2251540/v1Publisher landing page
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https://www.researchsquare.com/article/rs-2251540/latest.pdfDirect link to full text PDF
- Open access
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YesWhether a free full text is available
- OA status
-
goldOpen access status per OpenAlex
- OA URL
-
https://www.researchsquare.com/article/rs-2251540/latest.pdfDirect OA link when available
- Concepts
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Exome sequencing, Single Center, Urinary system, Medicine, Biology, Anatomy, Genetics, Mutation, Internal medicine, GeneTop concepts (fields/topics) attached by OpenAlex
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0Total citation count in OpenAlex
- References (count)
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27Number of works referenced by this work
- Related works (count)
-
10Other works algorithmically related by OpenAlex
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| publication_year | 2022 |
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