From Rhizosphere to Crop Production: Evolutionary and Molecular Insights into Plant Growth Promoting Rhizobacteria (PGPR) Article Swipe

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Edinson Larco-León , Pedro Lezama Asencio , Pablo Chuna Mogollón , Martha Lezama-Escobedo , Cynthia Ramos , Cecilia Bardales Vásquez , Percy Asmat , Manuel Hidalgo ·

YOU? · · 2025 · Open Access · · DOI: https://doi.org/10.53941/agrbio.2025.1000031

Plant growth-promoting rhizobacteria (PGPR) are key components of the plant microbiota that coevolved with hosts as an entity called holobiont, acquiring traits for chemotaxis, root adhesion, high-affinity nutrient capture, and antagonism of phytopathogens. By integrating evolutionary, molecular, and multi-omics perspectives, this review aims to synthesize how these adaptations drive direct (biofertilization, phytohormone modulation) and indirect (biocontrol, stress tolerance) benefits that enhance crop productivity and ecosystem services. Multi-omics studies are revealing conserved PGPR functions, including induction of nitrogenase, ACC deaminase, siderophore biosynthesis, exo/endometabolites among others, that coordinate colonization and plant signaling. Also, PGPR activate induced systemic resistance (JA/ET pathways) and interact with systemic acquired resistance to improve immunity. Agronomic applications span biofertilizers, biostimulants, biological control agents, improving nutrient use efficiency, root architecture, and resilience to abiotic/biotic stress. Nonetheless, field performance is context dependent, shaped by environmental factors, host genotype, management, competition with native microbiota, and among others imposing challenges to PGPR use. Thus, a framework including multi-omics, ecological modeling, and machine learning is needed to predict their functions, design synthetic consortia and tailor bioinoculants to crops and soils. Embedding PGPR within climate-smart and precision agriculture can reduce inputs, stabilize yields, and support long-term soil health, advancing sustainable, resilient food systems globally.

Related Topics

Competition (Biology)

Agriculture

Ecosystem

Biological Pest Control

Resilience (Materials Science)

Sustainable Agriculture

Psychological Resilience

Abiotic Component

Agroforestry

Host (Biology)

Concepts

Rhizobacteria Rhizosphere Biology Adaptability Resistance (ecology) Context (archaeology) Agronomy Crop Abiotic stress Food security Biotechnology Competition (biology) Agriculture Ecosystem Siderophore Biological pest control Antagonism Biotic stress Resilience (materials science) Sustainable agriculture Psychological resilience Crop yield Biofertilizer Abiotic component Crop productivity Agroforestry Drought tolerance Productivity Host (biology) Domestication Nutrient Root system

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Type: article
Language: en
Landing Page: https://doi.org/10.53941/agrbio.2025.1000031
PDF: https://media.sciltp.com/articles/2511002221/2511002221.pdf
OA Status: hybrid
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DOI: https://doi.org/10.53941/agrbio.2025.1000031

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Title: From Rhizosphere to Crop Production: Evolutionary and Molecular Insights into Plant Growth Promoting Rhizobacteria (PGPR)

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Language: en

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Publication year: 2025

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Publication date: 2025-11-21

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Authors: Edinson Larco-León, Pedro Lezama Asencio, Pablo Chuna Mogollón, Martha Lezama-Escobedo, Cynthia Ramos, Cecilia Bardales Vásquez, Percy Asmat, Manuel Hidalgo

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Landing page: https://doi.org/10.53941/agrbio.2025.1000031

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Concepts: Rhizobacteria, Rhizosphere, Biology, Adaptability, Resistance (ecology), Context (archaeology), Agronomy, Crop, Abiotic stress, Food security, Biotechnology, Competition (biology), Agriculture, Ecosystem, Siderophore, Biological pest control, Antagonism, Biotic stress, Resilience (materials science), Sustainable agriculture, Psychological resilience, Crop yield, Biofertilizer, Abiotic component, Crop productivity, Agroforestry, Drought tolerance, Productivity, Host (biology), Domestication, Nutrient, Root system

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