Genetic polymorphism detection in semi-domesticated perennial cotton (Gossypium ssp.) using an ISSR marker system and its application for molecular interspecific differentiation Article Swipe
Fernando dos Santos Araújo
,
Riselane de Lucena Alcântara Bruno
,
Nair Helena Castro Arriel
,
Everaldo S. Medeiros
,
Liziane Maria de Lima
,
Mayara Andrade Souza
,
Alberício Pereira de Andrade
,
Richeliel Albert Rodrigues Silva
,
Francival Cardoso Félix
,
Karialane da Silva Belarmino
·
YOU?
·
· 2022
· Open Access
·
· DOI: https://doi.org/10.21203/rs.3.rs-1902987/v1
YOU?
·
· 2022
· Open Access
·
· DOI: https://doi.org/10.21203/rs.3.rs-1902987/v1
Background The perennial cotton species Gossypium hirsutum L. r. marie-galante Hutch. and Gossypium barbadense L. are sources of variability for creating modern cotton varieties. However, these species are similar in shape and easily confused in young stages of their life, leading to difficulties in identification based on their morphology. Thus, in this study, an Inter-Simple Sequence Repeat (ISSR) marker system was used as a measure of genetic differentiation among 28 genotypes of perennial cotton from a Brazilian collection. Methods and Results A set of eleven ISSR primers yielded 101 bands, of which 48 (47.5%) were polymorphic. The mean values of polymorphism information content ( PIC =0.304) and polymorphism ( P =45.8%) showed that the ISSR primers are moderately informative. The ISSR markers exposed the high genetic differentiation ( G ST = 0.598) and a low level of gene flow ( N m = 0.338) between species, which suggests a pattern of reproductive isolation. The Cluster Analysis, based on Nei's genetic identity, clustered the 28 genotypes into two groups consistent with the taxonomical delimitation, occurrence mode (semi-domesticated and improved types) and partial concordance with geographic origin. Bayesian model-based structural analysis also suggests the existence of two genetic groups (Delta K = 2) and high membership likelihood (Q>0.98). Conclusions The ISSR marker system offers a new molecular approach to differentiate the G. hirsutum L. r. marie-galante and G. barbadense L. species. This study can expand the molecular marker resources for the identification and improvement of our knowledge about the genetic relationships between perennial cotton genotypes from Brazilian collections.
Related Topics
Concepts
Interspecific competition
Domestication
Gossypium
Biology
Polymorphism (computer science)
Gossypium barbadense
Genetic marker
Molecular marker
Gossypium hirsutum
Genetics
Evolutionary biology
Botany
Genotype
Gene
Metadata
- Type
- preprint
- Language
- en
- Landing Page
- https://doi.org/10.21203/rs.3.rs-1902987/v1
- https://www.researchsquare.com/article/rs-1902987/latest.pdf
- OA Status
- green
- References
- 18
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W4300414424
All OpenAlex metadata
Raw OpenAlex JSON
- OpenAlex ID
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https://openalex.org/W4300414424Canonical identifier for this work in OpenAlex
- DOI
-
https://doi.org/10.21203/rs.3.rs-1902987/v1Digital Object Identifier
- Title
-
Genetic polymorphism detection in semi-domesticated perennial cotton (Gossypium ssp.) using an ISSR marker system and its application for molecular interspecific differentiationWork title
- Type
-
preprintOpenAlex work type
- Language
-
enPrimary language
- Publication year
-
2022Year of publication
- Publication date
-
2022-08-09Full publication date if available
- Authors
-
Fernando dos Santos Araújo, Riselane de Lucena Alcântara Bruno, Nair Helena Castro Arriel, Everaldo S. Medeiros, Liziane Maria de Lima, Mayara Andrade Souza, Alberício Pereira de Andrade, Richeliel Albert Rodrigues Silva, Francival Cardoso Félix, Karialane da Silva BelarminoList of authors in order
- Landing page
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https://doi.org/10.21203/rs.3.rs-1902987/v1Publisher landing page
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https://www.researchsquare.com/article/rs-1902987/latest.pdfDirect link to full text PDF
- Open access
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YesWhether a free full text is available
- OA status
-
greenOpen access status per OpenAlex
- OA URL
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https://www.researchsquare.com/article/rs-1902987/latest.pdfDirect OA link when available
- Concepts
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Interspecific competition, Domestication, Gossypium, Biology, Polymorphism (computer science), Gossypium barbadense, Genetic marker, Molecular marker, Gossypium hirsutum, Genetics, Evolutionary biology, Botany, Genotype, GeneTop concepts (fields/topics) attached by OpenAlex
- Cited by
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0Total citation count in OpenAlex
- References (count)
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18Number of works referenced by this work
- Related works (count)
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10Other works algorithmically related by OpenAlex
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