Genomic investigation of a dengue virus outbreak in Thiès, Senegal, in 2018 Article Swipe
Amy Gaye
,
Tolla Ndiaye
,
Mouhamad Sy
,
Awa B. Dème
,
Alphonse Thiaw
,
Aita Sene
,
Cheikh Ndiaye
,
Younouss Diédhiou
,
Amadou Moctar Mbaye
,
Ibrahima Ndiaye
,
Christopher H. Tomkins-Tinch
,
Jules F. Gomis
,
Aïda Sadikh Badiane
,
Bronwyn MacInnis
,
Daniel J. Park
,
Mouhamadou Ndiaye
,
Ngayo Sy
,
Pardis C. Sabeti
,
Katherine J. Siddle
,
Daouda Ndiaye
·
YOU?
·
· 2021
· Open Access
·
· DOI: https://doi.org/10.1038/s41598-021-89070-1
YOU?
·
· 2021
· Open Access
·
· DOI: https://doi.org/10.1038/s41598-021-89070-1
Dengue virus is a major and rapidly growing public health concern in tropic and subtropic regions across the globe. In late 2018, Senegal experienced its largest dengue virus outbreak to date, covering several regions. However, little is known about the genetic diversity of dengue virus (DENV) in Senegal. Here we report complete viral genomes from 17 previously undetected DENV cases from the city of Thiès. In total we identified 19 cases of DENV in a cohort of 198 individuals with fever collected in October and November 2018. We detected 3 co-circulating serotypes; DENV 3 was the most frequent accounting for 11/17 sequences (65%), 4 (23%) were DENV2 and 2 (12%) were DENV1. Sequences were most similar to recent sequences from West Africa, suggesting ongoing local circulation of viral populations; however, detailed inference is limited by the scarcity of available genomic data. We did not find clear associations with reported clinical signs or symptoms, highlighting the importance of testing for diagnosing febrile diseases. Overall, these findings expand the known range of DENV in Senegal, and underscore the need for better genomic characterization of DENV in West Africa.
Related Topics
Concepts
Metadata
- Type
- article
- Language
- en
- Landing Page
- https://doi.org/10.1038/s41598-021-89070-1
- https://www.nature.com/articles/s41598-021-89070-1.pdf
- OA Status
- gold
- Cited By
- 30
- References
- 34
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W3162988283
All OpenAlex metadata
Raw OpenAlex JSON
- OpenAlex ID
-
https://openalex.org/W3162988283Canonical identifier for this work in OpenAlex
- DOI
-
https://doi.org/10.1038/s41598-021-89070-1Digital Object Identifier
- Title
-
Genomic investigation of a dengue virus outbreak in Thiès, Senegal, in 2018Work title
- Type
-
articleOpenAlex work type
- Language
-
enPrimary language
- Publication year
-
2021Year of publication
- Publication date
-
2021-05-14Full publication date if available
- Authors
-
Amy Gaye, Tolla Ndiaye, Mouhamad Sy, Awa B. Dème, Alphonse Thiaw, Aita Sene, Cheikh Ndiaye, Younouss Diédhiou, Amadou Moctar Mbaye, Ibrahima Ndiaye, Christopher H. Tomkins-Tinch, Jules F. Gomis, Aïda Sadikh Badiane, Bronwyn MacInnis, Daniel J. Park, Mouhamadou Ndiaye, Ngayo Sy, Pardis C. Sabeti, Katherine J. Siddle, Daouda NdiayeList of authors in order
- Landing page
-
https://doi.org/10.1038/s41598-021-89070-1Publisher landing page
- PDF URL
-
https://www.nature.com/articles/s41598-021-89070-1.pdfDirect link to full text PDF
- Open access
-
YesWhether a free full text is available
- OA status
-
goldOpen access status per OpenAlex
- OA URL
-
https://www.nature.com/articles/s41598-021-89070-1.pdfDirect OA link when available
- Concepts
-
Dengue fever, Dengue virus, Outbreak, Serotype, Virology, Biology, VirusTop concepts (fields/topics) attached by OpenAlex
- Cited by
-
30Total citation count in OpenAlex
- Citations by year (recent)
-
2025: 5, 2024: 9, 2023: 7, 2022: 7, 2021: 2Per-year citation counts (last 5 years)
- References (count)
-
34Number of works referenced by this work
- Related works (count)
-
10Other works algorithmically related by OpenAlex
Full payload
| id | https://openalex.org/W3162988283 |
|---|---|
| doi | https://doi.org/10.1038/s41598-021-89070-1 |
| ids.doi | https://doi.org/10.1038/s41598-021-89070-1 |
| ids.mag | 3162988283 |
| ids.pmid | https://pubmed.ncbi.nlm.nih.gov/33990632 |
| ids.openalex | https://openalex.org/W3162988283 |
| fwci | 5.97772008 |
| mesh[0].qualifier_ui | |
| mesh[0].descriptor_ui | D000293 |
| mesh[0].is_major_topic | False |
| mesh[0].qualifier_name | |
| mesh[0].descriptor_name | Adolescent |
| mesh[1].qualifier_ui | |
| mesh[1].descriptor_ui | D000328 |
| mesh[1].is_major_topic | False |
| mesh[1].qualifier_name | |
| mesh[1].descriptor_name | Adult |
| mesh[2].qualifier_ui | |
| mesh[2].descriptor_ui | D000368 |
| mesh[2].is_major_topic | False |
| mesh[2].qualifier_name | |
| mesh[2].descriptor_name | Aged |
| mesh[3].qualifier_ui | |
| mesh[3].descriptor_ui | D002648 |
| mesh[3].is_major_topic | False |
| mesh[3].qualifier_name | |
| mesh[3].descriptor_name | Child |
| mesh[4].qualifier_ui | |
| mesh[4].descriptor_ui | D002675 |
| mesh[4].is_major_topic | False |
| mesh[4].qualifier_name | |
| mesh[4].descriptor_name | Child, Preschool |
| mesh[5].qualifier_ui | Q000302 |
| mesh[5].descriptor_ui | D004279 |
| mesh[5].is_major_topic | False |
| mesh[5].qualifier_name | isolation & purification |
| mesh[5].descriptor_name | DNA, Viral |
| mesh[6].qualifier_ui | Q000097 |
| mesh[6].descriptor_ui | D003715 |
| mesh[6].is_major_topic | False |
| mesh[6].qualifier_name | blood |
| mesh[6].descriptor_name | Dengue |
| mesh[7].qualifier_ui | Q000175 |
| mesh[7].descriptor_ui | D003715 |
| mesh[7].is_major_topic | False |
| mesh[7].qualifier_name | diagnosis |
| mesh[7].descriptor_name | Dengue |
| mesh[8].qualifier_ui | Q000453 |
| mesh[8].descriptor_ui | D003715 |
| mesh[8].is_major_topic | False |
| mesh[8].qualifier_name | epidemiology |
| mesh[8].descriptor_name | Dengue |
| mesh[9].qualifier_ui | Q000821 |
| mesh[9].descriptor_ui | D003715 |
| mesh[9].is_major_topic | False |
| mesh[9].qualifier_name | virology |
| mesh[9].descriptor_name | Dengue |
| mesh[10].qualifier_ui | Q000235 |
| mesh[10].descriptor_ui | D003716 |
| mesh[10].is_major_topic | False |
| mesh[10].qualifier_name | genetics |
| mesh[10].descriptor_name | Dengue Virus |
| mesh[11].qualifier_ui | Q000302 |
| mesh[11].descriptor_ui | D003716 |
| mesh[11].is_major_topic | False |
| mesh[11].qualifier_name | isolation & purification |
| mesh[11].descriptor_name | Dengue Virus |
| mesh[12].qualifier_ui | Q000706 |
| mesh[12].descriptor_ui | D004196 |
| mesh[12].is_major_topic | False |
| mesh[12].qualifier_name | statistics & numerical data |
| mesh[12].descriptor_name | Disease Outbreaks |
| mesh[13].qualifier_ui | |
| mesh[13].descriptor_ui | D005260 |
| mesh[13].is_major_topic | False |
| mesh[13].qualifier_name | |
| mesh[13].descriptor_name | Female |
| mesh[14].qualifier_ui | |
| mesh[14].descriptor_ui | D016679 |
| mesh[14].is_major_topic | False |
| mesh[14].qualifier_name | |
| mesh[14].descriptor_name | Genome, Viral |
| mesh[15].qualifier_ui | |
| mesh[15].descriptor_ui | D006801 |
| mesh[15].is_major_topic | False |
| mesh[15].qualifier_name | |
| mesh[15].descriptor_name | Humans |
| mesh[16].qualifier_ui | |
| mesh[16].descriptor_ui | D008297 |
| mesh[16].is_major_topic | False |
| mesh[16].qualifier_name | |
| mesh[16].descriptor_name | Male |
| mesh[17].qualifier_ui | |
| mesh[17].descriptor_ui | D008875 |
| mesh[17].is_major_topic | False |
| mesh[17].qualifier_name | |
| mesh[17].descriptor_name | Middle Aged |
| mesh[18].qualifier_ui | |
| mesh[18].descriptor_ui | D017720 |
| mesh[18].is_major_topic | False |
| mesh[18].qualifier_name | |
| mesh[18].descriptor_name | Molecular Epidemiology |
| mesh[19].qualifier_ui | |
| mesh[19].descriptor_ui | D010802 |
| mesh[19].is_major_topic | False |
| mesh[19].qualifier_name | |
| mesh[19].descriptor_name | Phylogeny |
| mesh[20].qualifier_ui | Q000453 |
| mesh[20].descriptor_ui | D012675 |
| mesh[20].is_major_topic | False |
| mesh[20].qualifier_name | epidemiology |
| mesh[20].descriptor_name | Senegal |
| mesh[21].qualifier_ui | |
| mesh[21].descriptor_ui | D065288 |
| mesh[21].is_major_topic | False |
| mesh[21].qualifier_name | |
| mesh[21].descriptor_name | Serogroup |
| mesh[22].qualifier_ui | |
| mesh[22].descriptor_ui | D055815 |
| mesh[22].is_major_topic | False |
| mesh[22].qualifier_name | |
| mesh[22].descriptor_name | Young Adult |
| mesh[23].qualifier_ui | |
| mesh[23].descriptor_ui | D000293 |
| mesh[23].is_major_topic | False |
| mesh[23].qualifier_name | |
| mesh[23].descriptor_name | Adolescent |
| mesh[24].qualifier_ui | |
| mesh[24].descriptor_ui | D000328 |
| mesh[24].is_major_topic | False |
| mesh[24].qualifier_name | |
| mesh[24].descriptor_name | Adult |
| mesh[25].qualifier_ui | |
| mesh[25].descriptor_ui | D000368 |
| mesh[25].is_major_topic | False |
| mesh[25].qualifier_name | |
| mesh[25].descriptor_name | Aged |
| mesh[26].qualifier_ui | |
| mesh[26].descriptor_ui | D002648 |
| mesh[26].is_major_topic | False |
| mesh[26].qualifier_name | |
| mesh[26].descriptor_name | Child |
| mesh[27].qualifier_ui | |
| mesh[27].descriptor_ui | D002675 |
| mesh[27].is_major_topic | False |
| mesh[27].qualifier_name | |
| mesh[27].descriptor_name | Child, Preschool |
| mesh[28].qualifier_ui | Q000302 |
| mesh[28].descriptor_ui | D004279 |
| mesh[28].is_major_topic | False |
| mesh[28].qualifier_name | isolation & purification |
| mesh[28].descriptor_name | DNA, Viral |
| mesh[29].qualifier_ui | Q000097 |
| mesh[29].descriptor_ui | D003715 |
| mesh[29].is_major_topic | False |
| mesh[29].qualifier_name | blood |
| mesh[29].descriptor_name | Dengue |
| mesh[30].qualifier_ui | Q000175 |
| mesh[30].descriptor_ui | D003715 |
| mesh[30].is_major_topic | False |
| mesh[30].qualifier_name | diagnosis |
| mesh[30].descriptor_name | Dengue |
| mesh[31].qualifier_ui | Q000453 |
| mesh[31].descriptor_ui | D003715 |
| mesh[31].is_major_topic | False |
| mesh[31].qualifier_name | epidemiology |
| mesh[31].descriptor_name | Dengue |
| mesh[32].qualifier_ui | Q000821 |
| mesh[32].descriptor_ui | D003715 |
| mesh[32].is_major_topic | False |
| mesh[32].qualifier_name | virology |
| mesh[32].descriptor_name | Dengue |
| mesh[33].qualifier_ui | Q000235 |
| mesh[33].descriptor_ui | D003716 |
| mesh[33].is_major_topic | False |
| mesh[33].qualifier_name | genetics |
| mesh[33].descriptor_name | Dengue Virus |
| mesh[34].qualifier_ui | Q000302 |
| mesh[34].descriptor_ui | D003716 |
| mesh[34].is_major_topic | False |
| mesh[34].qualifier_name | isolation & purification |
| mesh[34].descriptor_name | Dengue Virus |
| mesh[35].qualifier_ui | Q000706 |
| mesh[35].descriptor_ui | D004196 |
| mesh[35].is_major_topic | False |
| mesh[35].qualifier_name | statistics & numerical data |
| mesh[35].descriptor_name | Disease Outbreaks |
| mesh[36].qualifier_ui | |
| mesh[36].descriptor_ui | D005260 |
| mesh[36].is_major_topic | False |
| mesh[36].qualifier_name | |
| mesh[36].descriptor_name | Female |
| mesh[37].qualifier_ui | |
| mesh[37].descriptor_ui | D016679 |
| mesh[37].is_major_topic | False |
| mesh[37].qualifier_name | |
| mesh[37].descriptor_name | Genome, Viral |
| mesh[38].qualifier_ui | |
| mesh[38].descriptor_ui | D006801 |
| mesh[38].is_major_topic | False |
| mesh[38].qualifier_name | |
| mesh[38].descriptor_name | Humans |
| mesh[39].qualifier_ui | |
| mesh[39].descriptor_ui | D008297 |
| mesh[39].is_major_topic | False |
| mesh[39].qualifier_name | |
| mesh[39].descriptor_name | Male |
| mesh[40].qualifier_ui | |
| mesh[40].descriptor_ui | D008875 |
| mesh[40].is_major_topic | False |
| mesh[40].qualifier_name | |
| mesh[40].descriptor_name | Middle Aged |
| mesh[41].qualifier_ui | |
| mesh[41].descriptor_ui | D017720 |
| mesh[41].is_major_topic | False |
| mesh[41].qualifier_name | |
| mesh[41].descriptor_name | Molecular Epidemiology |
| mesh[42].qualifier_ui | |
| mesh[42].descriptor_ui | D010802 |
| mesh[42].is_major_topic | False |
| mesh[42].qualifier_name | |
| mesh[42].descriptor_name | Phylogeny |
| mesh[43].qualifier_ui | Q000453 |
| mesh[43].descriptor_ui | D012675 |
| mesh[43].is_major_topic | False |
| mesh[43].qualifier_name | epidemiology |
| mesh[43].descriptor_name | Senegal |
| mesh[44].qualifier_ui | |
| mesh[44].descriptor_ui | D065288 |
| mesh[44].is_major_topic | False |
| mesh[44].qualifier_name | |
| mesh[44].descriptor_name | Serogroup |
| mesh[45].qualifier_ui | |
| mesh[45].descriptor_ui | D055815 |
| mesh[45].is_major_topic | False |
| mesh[45].qualifier_name | |
| mesh[45].descriptor_name | Young Adult |
| type | article |
| title | Genomic investigation of a dengue virus outbreak in Thiès, Senegal, in 2018 |
| biblio.issue | 1 |
| biblio.volume | 11 |
| biblio.last_page | 10321 |
| biblio.first_page | 10321 |
| topics[0].id | https://openalex.org/T10166 |
| topics[0].field.id | https://openalex.org/fields/27 |
| topics[0].field.display_name | Medicine |
| topics[0].score | 1.0 |
| topics[0].domain.id | https://openalex.org/domains/4 |
| topics[0].domain.display_name | Health Sciences |
| topics[0].subfield.id | https://openalex.org/subfields/2739 |
| topics[0].subfield.display_name | Public Health, Environmental and Occupational Health |
| topics[0].display_name | Mosquito-borne diseases and control |
| topics[1].id | https://openalex.org/T12047 |
| topics[1].field.id | https://openalex.org/fields/27 |
| topics[1].field.display_name | Medicine |
| topics[1].score | 0.9926999807357788 |
| topics[1].domain.id | https://openalex.org/domains/4 |
| topics[1].domain.display_name | Health Sciences |
| topics[1].subfield.id | https://openalex.org/subfields/2725 |
| topics[1].subfield.display_name | Infectious Diseases |
| topics[1].display_name | Viral Infections and Vectors |
| topics[2].id | https://openalex.org/T10091 |
| topics[2].field.id | https://openalex.org/fields/27 |
| topics[2].field.display_name | Medicine |
| topics[2].score | 0.9911999702453613 |
| topics[2].domain.id | https://openalex.org/domains/4 |
| topics[2].domain.display_name | Health Sciences |
| topics[2].subfield.id | https://openalex.org/subfields/2739 |
| topics[2].subfield.display_name | Public Health, Environmental and Occupational Health |
| topics[2].display_name | Malaria Research and Control |
| is_xpac | False |
| apc_list.value | 1890 |
| apc_list.currency | EUR |
| apc_list.value_usd | 2190 |
| apc_paid.value | 1890 |
| apc_paid.currency | EUR |
| apc_paid.value_usd | 2190 |
| concepts[0].id | https://openalex.org/C533803919 |
| concepts[0].level | 2 |
| concepts[0].score | 0.858567476272583 |
| concepts[0].wikidata | https://www.wikidata.org/wiki/Q30953 |
| concepts[0].display_name | Dengue fever |
| concepts[1].id | https://openalex.org/C2779635636 |
| concepts[1].level | 3 |
| concepts[1].score | 0.8302645683288574 |
| concepts[1].wikidata | https://www.wikidata.org/wiki/Q476209 |
| concepts[1].display_name | Dengue virus |
| concepts[2].id | https://openalex.org/C116675565 |
| concepts[2].level | 2 |
| concepts[2].score | 0.715123176574707 |
| concepts[2].wikidata | https://www.wikidata.org/wiki/Q3241045 |
| concepts[2].display_name | Outbreak |
| concepts[3].id | https://openalex.org/C10389963 |
| concepts[3].level | 2 |
| concepts[3].score | 0.6561489105224609 |
| concepts[3].wikidata | https://www.wikidata.org/wiki/Q848328 |
| concepts[3].display_name | Serotype |
| concepts[4].id | https://openalex.org/C159047783 |
| concepts[4].level | 1 |
| concepts[4].score | 0.6006413698196411 |
| concepts[4].wikidata | https://www.wikidata.org/wiki/Q7215 |
| concepts[4].display_name | Virology |
| concepts[5].id | https://openalex.org/C86803240 |
| concepts[5].level | 0 |
| concepts[5].score | 0.5591356158256531 |
| concepts[5].wikidata | https://www.wikidata.org/wiki/Q420 |
| concepts[5].display_name | Biology |
| concepts[6].id | https://openalex.org/C2522874641 |
| concepts[6].level | 2 |
| concepts[6].score | 0.46487119793891907 |
| concepts[6].wikidata | https://www.wikidata.org/wiki/Q808 |
| concepts[6].display_name | Virus |
| keywords[0].id | https://openalex.org/keywords/dengue-fever |
| keywords[0].score | 0.858567476272583 |
| keywords[0].display_name | Dengue fever |
| keywords[1].id | https://openalex.org/keywords/dengue-virus |
| keywords[1].score | 0.8302645683288574 |
| keywords[1].display_name | Dengue virus |
| keywords[2].id | https://openalex.org/keywords/outbreak |
| keywords[2].score | 0.715123176574707 |
| keywords[2].display_name | Outbreak |
| keywords[3].id | https://openalex.org/keywords/serotype |
| keywords[3].score | 0.6561489105224609 |
| keywords[3].display_name | Serotype |
| keywords[4].id | https://openalex.org/keywords/virology |
| keywords[4].score | 0.6006413698196411 |
| keywords[4].display_name | Virology |
| keywords[5].id | https://openalex.org/keywords/biology |
| keywords[5].score | 0.5591356158256531 |
| keywords[5].display_name | Biology |
| keywords[6].id | https://openalex.org/keywords/virus |
| keywords[6].score | 0.46487119793891907 |
| keywords[6].display_name | Virus |
| language | en |
| locations[0].id | doi:10.1038/s41598-021-89070-1 |
| locations[0].is_oa | True |
| locations[0].source.id | https://openalex.org/S196734849 |
| locations[0].source.issn | 2045-2322 |
| locations[0].source.type | journal |
| locations[0].source.is_oa | True |
| locations[0].source.issn_l | 2045-2322 |
| locations[0].source.is_core | True |
| locations[0].source.is_in_doaj | True |
| locations[0].source.display_name | Scientific Reports |
| locations[0].source.host_organization | https://openalex.org/P4310319908 |
| locations[0].source.host_organization_name | Nature Portfolio |
| locations[0].source.host_organization_lineage | https://openalex.org/P4310319908 |
| locations[0].license | cc-by |
| locations[0].pdf_url | https://www.nature.com/articles/s41598-021-89070-1.pdf |
| locations[0].version | publishedVersion |
| locations[0].raw_type | journal-article |
| locations[0].license_id | https://openalex.org/licenses/cc-by |
| locations[0].is_accepted | True |
| locations[0].is_published | True |
| locations[0].raw_source_name | Scientific Reports |
| locations[0].landing_page_url | https://doi.org/10.1038/s41598-021-89070-1 |
| locations[1].id | pmid:33990632 |
| locations[1].is_oa | False |
| locations[1].source.id | https://openalex.org/S4306525036 |
| locations[1].source.issn | |
| locations[1].source.type | repository |
| locations[1].source.is_oa | False |
| locations[1].source.issn_l | |
| locations[1].source.is_core | False |
| locations[1].source.is_in_doaj | False |
| locations[1].source.display_name | PubMed |
| locations[1].source.host_organization | https://openalex.org/I1299303238 |
| locations[1].source.host_organization_name | National Institutes of Health |
| locations[1].source.host_organization_lineage | https://openalex.org/I1299303238 |
| locations[1].license | |
| locations[1].pdf_url | |
| locations[1].version | publishedVersion |
| locations[1].raw_type | |
| locations[1].license_id | |
| locations[1].is_accepted | True |
| locations[1].is_published | True |
| locations[1].raw_source_name | Scientific reports |
| locations[1].landing_page_url | https://pubmed.ncbi.nlm.nih.gov/33990632 |
| locations[2].id | pmh:oai:pubmedcentral.nih.gov:8121849 |
| locations[2].is_oa | True |
| locations[2].source.id | https://openalex.org/S2764455111 |
| locations[2].source.issn | |
| locations[2].source.type | repository |
| locations[2].source.is_oa | False |
| locations[2].source.issn_l | |
| locations[2].source.is_core | False |
| locations[2].source.is_in_doaj | False |
| locations[2].source.display_name | PubMed Central |
| locations[2].source.host_organization | https://openalex.org/I1299303238 |
| locations[2].source.host_organization_name | National Institutes of Health |
| locations[2].source.host_organization_lineage | https://openalex.org/I1299303238 |
| locations[2].license | other-oa |
| locations[2].pdf_url | |
| locations[2].version | submittedVersion |
| locations[2].raw_type | Text |
| locations[2].license_id | https://openalex.org/licenses/other-oa |
| locations[2].is_accepted | False |
| locations[2].is_published | False |
| locations[2].raw_source_name | Sci Rep |
| locations[2].landing_page_url | https://www.ncbi.nlm.nih.gov/pmc/articles/8121849 |
| locations[3].id | pmh:oai:doaj.org/article:c3d60b4f776f42ed8b5bc160ac7a2dd4 |
| locations[3].is_oa | True |
| locations[3].source.id | https://openalex.org/S4306401280 |
| locations[3].source.issn | |
| locations[3].source.type | repository |
| locations[3].source.is_oa | False |
| locations[3].source.issn_l | |
| locations[3].source.is_core | False |
| locations[3].source.is_in_doaj | False |
| locations[3].source.display_name | DOAJ (DOAJ: Directory of Open Access Journals) |
| locations[3].source.host_organization | |
| locations[3].source.host_organization_name | |
| locations[3].source.host_organization_lineage | |
| locations[3].license | cc-by-sa |
| locations[3].pdf_url | |
| locations[3].version | submittedVersion |
| locations[3].raw_type | article |
| locations[3].license_id | https://openalex.org/licenses/cc-by-sa |
| locations[3].is_accepted | False |
| locations[3].is_published | False |
| locations[3].raw_source_name | Scientific Reports, Vol 11, Iss 1, Pp 1-9 (2021) |
| locations[3].landing_page_url | https://doaj.org/article/c3d60b4f776f42ed8b5bc160ac7a2dd4 |
| indexed_in | crossref, doaj, pubmed |
| authorships[0].author.id | https://openalex.org/A5090129418 |
| authorships[0].author.orcid | https://orcid.org/0000-0001-6604-8005 |
| authorships[0].author.display_name | Amy Gaye |
| authorships[0].countries | SN |
| authorships[0].affiliations[0].institution_ids | https://openalex.org/I4210106377, https://openalex.org/I96840727 |
| authorships[0].affiliations[0].raw_affiliation_string | Laboratoire de Parasitologie-Mycologie, Hôpital Aristide le Dantec, Université Cheikh Anta Diop de Dakar, BP 16477, Dakar, Senegal |
| authorships[0].institutions[0].id | https://openalex.org/I96840727 |
| authorships[0].institutions[0].ror | https://ror.org/04je6yw13 |
| authorships[0].institutions[0].type | education |
| authorships[0].institutions[0].lineage | https://openalex.org/I96840727 |
| authorships[0].institutions[0].country_code | SN |
| authorships[0].institutions[0].display_name | Cheikh Anta Diop University |
| authorships[0].institutions[1].id | https://openalex.org/I4210106377 |
| authorships[0].institutions[1].ror | https://ror.org/01n1j0f20 |
| authorships[0].institutions[1].type | healthcare |
| authorships[0].institutions[1].lineage | https://openalex.org/I4210106377 |
| authorships[0].institutions[1].country_code | SN |
| authorships[0].institutions[1].display_name | Hôpital Aristide Le Dantec |
| authorships[0].author_position | first |
| authorships[0].raw_author_name | Amy Gaye |
| authorships[0].is_corresponding | False |
| authorships[0].raw_affiliation_strings | Laboratoire de Parasitologie-Mycologie, Hôpital Aristide le Dantec, Université Cheikh Anta Diop de Dakar, BP 16477, Dakar, Senegal |
| authorships[1].author.id | https://openalex.org/A5111118494 |
| authorships[1].author.orcid | |
| authorships[1].author.display_name | Tolla Ndiaye |
| authorships[1].countries | SN |
| authorships[1].affiliations[0].institution_ids | https://openalex.org/I4210106377, https://openalex.org/I96840727 |
| authorships[1].affiliations[0].raw_affiliation_string | Laboratoire de Parasitologie-Mycologie, Hôpital Aristide le Dantec, Université Cheikh Anta Diop de Dakar, BP 16477, Dakar, Senegal |
| authorships[1].institutions[0].id | https://openalex.org/I96840727 |
| authorships[1].institutions[0].ror | https://ror.org/04je6yw13 |
| authorships[1].institutions[0].type | education |
| authorships[1].institutions[0].lineage | https://openalex.org/I96840727 |
| authorships[1].institutions[0].country_code | SN |
| authorships[1].institutions[0].display_name | Cheikh Anta Diop University |
| authorships[1].institutions[1].id | https://openalex.org/I4210106377 |
| authorships[1].institutions[1].ror | https://ror.org/01n1j0f20 |
| authorships[1].institutions[1].type | healthcare |
| authorships[1].institutions[1].lineage | https://openalex.org/I4210106377 |
| authorships[1].institutions[1].country_code | SN |
| authorships[1].institutions[1].display_name | Hôpital Aristide Le Dantec |
| authorships[1].author_position | middle |
| authorships[1].raw_author_name | Tolla Ndiaye |
| authorships[1].is_corresponding | False |
| authorships[1].raw_affiliation_strings | Laboratoire de Parasitologie-Mycologie, Hôpital Aristide le Dantec, Université Cheikh Anta Diop de Dakar, BP 16477, Dakar, Senegal |
| authorships[2].author.id | https://openalex.org/A5009943495 |
| authorships[2].author.orcid | https://orcid.org/0000-0001-5242-783X |
| authorships[2].author.display_name | Mouhamad Sy |
| authorships[2].countries | SN |
| authorships[2].affiliations[0].institution_ids | https://openalex.org/I4210106377, https://openalex.org/I96840727 |
| authorships[2].affiliations[0].raw_affiliation_string | Laboratoire de Parasitologie-Mycologie, Hôpital Aristide le Dantec, Université Cheikh Anta Diop de Dakar, BP 16477, Dakar, Senegal |
| authorships[2].institutions[0].id | https://openalex.org/I96840727 |
| authorships[2].institutions[0].ror | https://ror.org/04je6yw13 |
| authorships[2].institutions[0].type | education |
| authorships[2].institutions[0].lineage | https://openalex.org/I96840727 |
| authorships[2].institutions[0].country_code | SN |
| authorships[2].institutions[0].display_name | Cheikh Anta Diop University |
| authorships[2].institutions[1].id | https://openalex.org/I4210106377 |
| authorships[2].institutions[1].ror | https://ror.org/01n1j0f20 |
| authorships[2].institutions[1].type | healthcare |
| authorships[2].institutions[1].lineage | https://openalex.org/I4210106377 |
| authorships[2].institutions[1].country_code | SN |
| authorships[2].institutions[1].display_name | Hôpital Aristide Le Dantec |
| authorships[2].author_position | middle |
| authorships[2].raw_author_name | Mouhamad Sy |
| authorships[2].is_corresponding | False |
| authorships[2].raw_affiliation_strings | Laboratoire de Parasitologie-Mycologie, Hôpital Aristide le Dantec, Université Cheikh Anta Diop de Dakar, BP 16477, Dakar, Senegal |
| authorships[3].author.id | https://openalex.org/A5012564116 |
| authorships[3].author.orcid | https://orcid.org/0000-0002-3119-6419 |
| authorships[3].author.display_name | Awa B. Dème |
| authorships[3].countries | SN |
| authorships[3].affiliations[0].institution_ids | https://openalex.org/I4210106377, https://openalex.org/I96840727 |
| authorships[3].affiliations[0].raw_affiliation_string | Laboratoire de Parasitologie-Mycologie, Hôpital Aristide le Dantec, Université Cheikh Anta Diop de Dakar, BP 16477, Dakar, Senegal |
| authorships[3].institutions[0].id | https://openalex.org/I96840727 |
| authorships[3].institutions[0].ror | https://ror.org/04je6yw13 |
| authorships[3].institutions[0].type | education |
| authorships[3].institutions[0].lineage | https://openalex.org/I96840727 |
| authorships[3].institutions[0].country_code | SN |
| authorships[3].institutions[0].display_name | Cheikh Anta Diop University |
| authorships[3].institutions[1].id | https://openalex.org/I4210106377 |
| authorships[3].institutions[1].ror | https://ror.org/01n1j0f20 |
| authorships[3].institutions[1].type | healthcare |
| authorships[3].institutions[1].lineage | https://openalex.org/I4210106377 |
| authorships[3].institutions[1].country_code | SN |
| authorships[3].institutions[1].display_name | Hôpital Aristide Le Dantec |
| authorships[3].author_position | middle |
| authorships[3].raw_author_name | Awa B. Deme |
| authorships[3].is_corresponding | False |
| authorships[3].raw_affiliation_strings | Laboratoire de Parasitologie-Mycologie, Hôpital Aristide le Dantec, Université Cheikh Anta Diop de Dakar, BP 16477, Dakar, Senegal |
| authorships[4].author.id | https://openalex.org/A5012447976 |
| authorships[4].author.orcid | |
| authorships[4].author.display_name | Alphonse Thiaw |
| authorships[4].countries | SN |
| authorships[4].affiliations[0].institution_ids | https://openalex.org/I4210106377, https://openalex.org/I96840727 |
| authorships[4].affiliations[0].raw_affiliation_string | Laboratoire de Parasitologie-Mycologie, Hôpital Aristide le Dantec, Université Cheikh Anta Diop de Dakar, BP 16477, Dakar, Senegal |
| authorships[4].institutions[0].id | https://openalex.org/I96840727 |
| authorships[4].institutions[0].ror | https://ror.org/04je6yw13 |
| authorships[4].institutions[0].type | education |
| authorships[4].institutions[0].lineage | https://openalex.org/I96840727 |
| authorships[4].institutions[0].country_code | SN |
| authorships[4].institutions[0].display_name | Cheikh Anta Diop University |
| authorships[4].institutions[1].id | https://openalex.org/I4210106377 |
| authorships[4].institutions[1].ror | https://ror.org/01n1j0f20 |
| authorships[4].institutions[1].type | healthcare |
| authorships[4].institutions[1].lineage | https://openalex.org/I4210106377 |
| authorships[4].institutions[1].country_code | SN |
| authorships[4].institutions[1].display_name | Hôpital Aristide Le Dantec |
| authorships[4].author_position | middle |
| authorships[4].raw_author_name | Alphonse B. Thiaw |
| authorships[4].is_corresponding | False |
| authorships[4].raw_affiliation_strings | Laboratoire de Parasitologie-Mycologie, Hôpital Aristide le Dantec, Université Cheikh Anta Diop de Dakar, BP 16477, Dakar, Senegal |
| authorships[5].author.id | https://openalex.org/A5048663173 |
| authorships[5].author.orcid | |
| authorships[5].author.display_name | Aita Sene |
| authorships[5].countries | SN |
| authorships[5].affiliations[0].institution_ids | https://openalex.org/I4210106377, https://openalex.org/I96840727 |
| authorships[5].affiliations[0].raw_affiliation_string | Laboratoire de Parasitologie-Mycologie, Hôpital Aristide le Dantec, Université Cheikh Anta Diop de Dakar, BP 16477, Dakar, Senegal |
| authorships[5].institutions[0].id | https://openalex.org/I96840727 |
| authorships[5].institutions[0].ror | https://ror.org/04je6yw13 |
| authorships[5].institutions[0].type | education |
| authorships[5].institutions[0].lineage | https://openalex.org/I96840727 |
| authorships[5].institutions[0].country_code | SN |
| authorships[5].institutions[0].display_name | Cheikh Anta Diop University |
| authorships[5].institutions[1].id | https://openalex.org/I4210106377 |
| authorships[5].institutions[1].ror | https://ror.org/01n1j0f20 |
| authorships[5].institutions[1].type | healthcare |
| authorships[5].institutions[1].lineage | https://openalex.org/I4210106377 |
| authorships[5].institutions[1].country_code | SN |
| authorships[5].institutions[1].display_name | Hôpital Aristide Le Dantec |
| authorships[5].author_position | middle |
| authorships[5].raw_author_name | Aita Sene |
| authorships[5].is_corresponding | False |
| authorships[5].raw_affiliation_strings | Laboratoire de Parasitologie-Mycologie, Hôpital Aristide le Dantec, Université Cheikh Anta Diop de Dakar, BP 16477, Dakar, Senegal |
| authorships[6].author.id | https://openalex.org/A5010797182 |
| authorships[6].author.orcid | https://orcid.org/0000-0003-4198-7385 |
| authorships[6].author.display_name | Cheikh Ndiaye |
| authorships[6].countries | SN |
| authorships[6].affiliations[0].institution_ids | https://openalex.org/I4210106377, https://openalex.org/I96840727 |
| authorships[6].affiliations[0].raw_affiliation_string | Laboratoire de Parasitologie-Mycologie, Hôpital Aristide le Dantec, Université Cheikh Anta Diop de Dakar, BP 16477, Dakar, Senegal |
| authorships[6].institutions[0].id | https://openalex.org/I96840727 |
| authorships[6].institutions[0].ror | https://ror.org/04je6yw13 |
| authorships[6].institutions[0].type | education |
| authorships[6].institutions[0].lineage | https://openalex.org/I96840727 |
| authorships[6].institutions[0].country_code | SN |
| authorships[6].institutions[0].display_name | Cheikh Anta Diop University |
| authorships[6].institutions[1].id | https://openalex.org/I4210106377 |
| authorships[6].institutions[1].ror | https://ror.org/01n1j0f20 |
| authorships[6].institutions[1].type | healthcare |
| authorships[6].institutions[1].lineage | https://openalex.org/I4210106377 |
| authorships[6].institutions[1].country_code | SN |
| authorships[6].institutions[1].display_name | Hôpital Aristide Le Dantec |
| authorships[6].author_position | middle |
| authorships[6].raw_author_name | Cheikh Ndiaye |
| authorships[6].is_corresponding | False |
| authorships[6].raw_affiliation_strings | Laboratoire de Parasitologie-Mycologie, Hôpital Aristide le Dantec, Université Cheikh Anta Diop de Dakar, BP 16477, Dakar, Senegal |
| authorships[7].author.id | https://openalex.org/A5080696370 |
| authorships[7].author.orcid | |
| authorships[7].author.display_name | Younouss Diédhiou |
| authorships[7].countries | SN |
| authorships[7].affiliations[0].institution_ids | https://openalex.org/I4210106377, https://openalex.org/I96840727 |
| authorships[7].affiliations[0].raw_affiliation_string | Laboratoire de Parasitologie-Mycologie, Hôpital Aristide le Dantec, Université Cheikh Anta Diop de Dakar, BP 16477, Dakar, Senegal |
| authorships[7].institutions[0].id | https://openalex.org/I96840727 |
| authorships[7].institutions[0].ror | https://ror.org/04je6yw13 |
| authorships[7].institutions[0].type | education |
| authorships[7].institutions[0].lineage | https://openalex.org/I96840727 |
| authorships[7].institutions[0].country_code | SN |
| authorships[7].institutions[0].display_name | Cheikh Anta Diop University |
| authorships[7].institutions[1].id | https://openalex.org/I4210106377 |
| authorships[7].institutions[1].ror | https://ror.org/01n1j0f20 |
| authorships[7].institutions[1].type | healthcare |
| authorships[7].institutions[1].lineage | https://openalex.org/I4210106377 |
| authorships[7].institutions[1].country_code | SN |
| authorships[7].institutions[1].display_name | Hôpital Aristide Le Dantec |
| authorships[7].author_position | middle |
| authorships[7].raw_author_name | Younouss Diedhiou |
| authorships[7].is_corresponding | False |
| authorships[7].raw_affiliation_strings | Laboratoire de Parasitologie-Mycologie, Hôpital Aristide le Dantec, Université Cheikh Anta Diop de Dakar, BP 16477, Dakar, Senegal |
| authorships[8].author.id | https://openalex.org/A5031696725 |
| authorships[8].author.orcid | |
| authorships[8].author.display_name | Amadou Moctar Mbaye |
| authorships[8].countries | SN |
| authorships[8].affiliations[0].institution_ids | https://openalex.org/I4210106377, https://openalex.org/I96840727 |
| authorships[8].affiliations[0].raw_affiliation_string | Laboratoire de Parasitologie-Mycologie, Hôpital Aristide le Dantec, Université Cheikh Anta Diop de Dakar, BP 16477, Dakar, Senegal |
| authorships[8].institutions[0].id | https://openalex.org/I96840727 |
| authorships[8].institutions[0].ror | https://ror.org/04je6yw13 |
| authorships[8].institutions[0].type | education |
| authorships[8].institutions[0].lineage | https://openalex.org/I96840727 |
| authorships[8].institutions[0].country_code | SN |
| authorships[8].institutions[0].display_name | Cheikh Anta Diop University |
| authorships[8].institutions[1].id | https://openalex.org/I4210106377 |
| authorships[8].institutions[1].ror | https://ror.org/01n1j0f20 |
| authorships[8].institutions[1].type | healthcare |
| authorships[8].institutions[1].lineage | https://openalex.org/I4210106377 |
| authorships[8].institutions[1].country_code | SN |
| authorships[8].institutions[1].display_name | Hôpital Aristide Le Dantec |
| authorships[8].author_position | middle |
| authorships[8].raw_author_name | Amadou M. Mbaye |
| authorships[8].is_corresponding | False |
| authorships[8].raw_affiliation_strings | Laboratoire de Parasitologie-Mycologie, Hôpital Aristide le Dantec, Université Cheikh Anta Diop de Dakar, BP 16477, Dakar, Senegal |
| authorships[9].author.id | https://openalex.org/A5046342603 |
| authorships[9].author.orcid | https://orcid.org/0000-0003-1049-8263 |
| authorships[9].author.display_name | Ibrahima Ndiaye |
| authorships[9].countries | SN |
| authorships[9].affiliations[0].institution_ids | https://openalex.org/I4210106377, https://openalex.org/I96840727 |
| authorships[9].affiliations[0].raw_affiliation_string | Laboratoire de Parasitologie-Mycologie, Hôpital Aristide le Dantec, Université Cheikh Anta Diop de Dakar, BP 16477, Dakar, Senegal |
| authorships[9].institutions[0].id | https://openalex.org/I96840727 |
| authorships[9].institutions[0].ror | https://ror.org/04je6yw13 |
| authorships[9].institutions[0].type | education |
| authorships[9].institutions[0].lineage | https://openalex.org/I96840727 |
| authorships[9].institutions[0].country_code | SN |
| authorships[9].institutions[0].display_name | Cheikh Anta Diop University |
| authorships[9].institutions[1].id | https://openalex.org/I4210106377 |
| authorships[9].institutions[1].ror | https://ror.org/01n1j0f20 |
| authorships[9].institutions[1].type | healthcare |
| authorships[9].institutions[1].lineage | https://openalex.org/I4210106377 |
| authorships[9].institutions[1].country_code | SN |
| authorships[9].institutions[1].display_name | Hôpital Aristide Le Dantec |
| authorships[9].author_position | middle |
| authorships[9].raw_author_name | Ibrahima Ndiaye |
| authorships[9].is_corresponding | False |
| authorships[9].raw_affiliation_strings | Laboratoire de Parasitologie-Mycologie, Hôpital Aristide le Dantec, Université Cheikh Anta Diop de Dakar, BP 16477, Dakar, Senegal |
| authorships[10].author.id | https://openalex.org/A5015468458 |
| authorships[10].author.orcid | https://orcid.org/0000-0002-9114-6421 |
| authorships[10].author.display_name | Christopher H. Tomkins-Tinch |
| authorships[10].countries | US |
| authorships[10].affiliations[0].institution_ids | https://openalex.org/I107606265 |
| authorships[10].affiliations[0].raw_affiliation_string | Broad Institute of MIT and Harvard, Cambridge, MA, USA |
| authorships[10].institutions[0].id | https://openalex.org/I107606265 |
| authorships[10].institutions[0].ror | https://ror.org/05a0ya142 |
| authorships[10].institutions[0].type | nonprofit |
| authorships[10].institutions[0].lineage | https://openalex.org/I107606265 |
| authorships[10].institutions[0].country_code | US |
| authorships[10].institutions[0].display_name | Broad Institute |
| authorships[10].author_position | middle |
| authorships[10].raw_author_name | Christopher Tomkins-Tinch |
| authorships[10].is_corresponding | False |
| authorships[10].raw_affiliation_strings | Broad Institute of MIT and Harvard, Cambridge, MA, USA |
| authorships[11].author.id | https://openalex.org/A5051075108 |
| authorships[11].author.orcid | |
| authorships[11].author.display_name | Jules F. Gomis |
| authorships[11].countries | SN |
| authorships[11].affiliations[0].institution_ids | https://openalex.org/I4210106377, https://openalex.org/I96840727 |
| authorships[11].affiliations[0].raw_affiliation_string | Laboratoire de Parasitologie-Mycologie, Hôpital Aristide le Dantec, Université Cheikh Anta Diop de Dakar, BP 16477, Dakar, Senegal |
| authorships[11].institutions[0].id | https://openalex.org/I96840727 |
| authorships[11].institutions[0].ror | https://ror.org/04je6yw13 |
| authorships[11].institutions[0].type | education |
| authorships[11].institutions[0].lineage | https://openalex.org/I96840727 |
| authorships[11].institutions[0].country_code | SN |
| authorships[11].institutions[0].display_name | Cheikh Anta Diop University |
| authorships[11].institutions[1].id | https://openalex.org/I4210106377 |
| authorships[11].institutions[1].ror | https://ror.org/01n1j0f20 |
| authorships[11].institutions[1].type | healthcare |
| authorships[11].institutions[1].lineage | https://openalex.org/I4210106377 |
| authorships[11].institutions[1].country_code | SN |
| authorships[11].institutions[1].display_name | Hôpital Aristide Le Dantec |
| authorships[11].author_position | middle |
| authorships[11].raw_author_name | Jules F. Gomis |
| authorships[11].is_corresponding | False |
| authorships[11].raw_affiliation_strings | Laboratoire de Parasitologie-Mycologie, Hôpital Aristide le Dantec, Université Cheikh Anta Diop de Dakar, BP 16477, Dakar, Senegal |
| authorships[12].author.id | https://openalex.org/A5047509255 |
| authorships[12].author.orcid | https://orcid.org/0000-0002-1118-4998 |
| authorships[12].author.display_name | Aïda Sadikh Badiane |
| authorships[12].countries | SN |
| authorships[12].affiliations[0].institution_ids | https://openalex.org/I4210106377, https://openalex.org/I96840727 |
| authorships[12].affiliations[0].raw_affiliation_string | Laboratoire de Parasitologie-Mycologie, Hôpital Aristide le Dantec, Université Cheikh Anta Diop de Dakar, BP 16477, Dakar, Senegal |
| authorships[12].institutions[0].id | https://openalex.org/I96840727 |
| authorships[12].institutions[0].ror | https://ror.org/04je6yw13 |
| authorships[12].institutions[0].type | education |
| authorships[12].institutions[0].lineage | https://openalex.org/I96840727 |
| authorships[12].institutions[0].country_code | SN |
| authorships[12].institutions[0].display_name | Cheikh Anta Diop University |
| authorships[12].institutions[1].id | https://openalex.org/I4210106377 |
| authorships[12].institutions[1].ror | https://ror.org/01n1j0f20 |
| authorships[12].institutions[1].type | healthcare |
| authorships[12].institutions[1].lineage | https://openalex.org/I4210106377 |
| authorships[12].institutions[1].country_code | SN |
| authorships[12].institutions[1].display_name | Hôpital Aristide Le Dantec |
| authorships[12].author_position | middle |
| authorships[12].raw_author_name | Aida S. Badiane |
| authorships[12].is_corresponding | False |
| authorships[12].raw_affiliation_strings | Laboratoire de Parasitologie-Mycologie, Hôpital Aristide le Dantec, Université Cheikh Anta Diop de Dakar, BP 16477, Dakar, Senegal |
| authorships[13].author.id | https://openalex.org/A5055621107 |
| authorships[13].author.orcid | https://orcid.org/0000-0003-0082-968X |
| authorships[13].author.display_name | Bronwyn MacInnis |
| authorships[13].countries | US |
| authorships[13].affiliations[0].institution_ids | https://openalex.org/I107606265 |
| authorships[13].affiliations[0].raw_affiliation_string | Broad Institute of MIT and Harvard, Cambridge, MA, USA |
| authorships[13].institutions[0].id | https://openalex.org/I107606265 |
| authorships[13].institutions[0].ror | https://ror.org/05a0ya142 |
| authorships[13].institutions[0].type | nonprofit |
| authorships[13].institutions[0].lineage | https://openalex.org/I107606265 |
| authorships[13].institutions[0].country_code | US |
| authorships[13].institutions[0].display_name | Broad Institute |
| authorships[13].author_position | middle |
| authorships[13].raw_author_name | Bronwyn MacInnis |
| authorships[13].is_corresponding | False |
| authorships[13].raw_affiliation_strings | Broad Institute of MIT and Harvard, Cambridge, MA, USA |
| authorships[14].author.id | https://openalex.org/A5103052780 |
| authorships[14].author.orcid | https://orcid.org/0000-0001-7226-7781 |
| authorships[14].author.display_name | Daniel J. Park |
| authorships[14].countries | US |
| authorships[14].affiliations[0].institution_ids | https://openalex.org/I107606265 |
| authorships[14].affiliations[0].raw_affiliation_string | Broad Institute of MIT and Harvard, Cambridge, MA, USA |
| authorships[14].institutions[0].id | https://openalex.org/I107606265 |
| authorships[14].institutions[0].ror | https://ror.org/05a0ya142 |
| authorships[14].institutions[0].type | nonprofit |
| authorships[14].institutions[0].lineage | https://openalex.org/I107606265 |
| authorships[14].institutions[0].country_code | US |
| authorships[14].institutions[0].display_name | Broad Institute |
| authorships[14].author_position | middle |
| authorships[14].raw_author_name | Daniel J. Park |
| authorships[14].is_corresponding | False |
| authorships[14].raw_affiliation_strings | Broad Institute of MIT and Harvard, Cambridge, MA, USA |
| authorships[15].author.id | https://openalex.org/A5034850528 |
| authorships[15].author.orcid | https://orcid.org/0000-0002-5619-8859 |
| authorships[15].author.display_name | Mouhamadou Ndiaye |
| authorships[15].countries | SN |
| authorships[15].affiliations[0].institution_ids | https://openalex.org/I4210106377, https://openalex.org/I96840727 |
| authorships[15].affiliations[0].raw_affiliation_string | Laboratoire de Parasitologie-Mycologie, Hôpital Aristide le Dantec, Université Cheikh Anta Diop de Dakar, BP 16477, Dakar, Senegal |
| authorships[15].institutions[0].id | https://openalex.org/I96840727 |
| authorships[15].institutions[0].ror | https://ror.org/04je6yw13 |
| authorships[15].institutions[0].type | education |
| authorships[15].institutions[0].lineage | https://openalex.org/I96840727 |
| authorships[15].institutions[0].country_code | SN |
| authorships[15].institutions[0].display_name | Cheikh Anta Diop University |
| authorships[15].institutions[1].id | https://openalex.org/I4210106377 |
| authorships[15].institutions[1].ror | https://ror.org/01n1j0f20 |
| authorships[15].institutions[1].type | healthcare |
| authorships[15].institutions[1].lineage | https://openalex.org/I4210106377 |
| authorships[15].institutions[1].country_code | SN |
| authorships[15].institutions[1].display_name | Hôpital Aristide Le Dantec |
| authorships[15].author_position | middle |
| authorships[15].raw_author_name | Mouhamadou Ndiaye |
| authorships[15].is_corresponding | False |
| authorships[15].raw_affiliation_strings | Laboratoire de Parasitologie-Mycologie, Hôpital Aristide le Dantec, Université Cheikh Anta Diop de Dakar, BP 16477, Dakar, Senegal |
| authorships[16].author.id | https://openalex.org/A5072377749 |
| authorships[16].author.orcid | |
| authorships[16].author.display_name | Ngayo Sy |
| authorships[16].countries | SN |
| authorships[16].affiliations[0].institution_ids | https://openalex.org/I79793008 |
| authorships[16].affiliations[0].raw_affiliation_string | Service de Lutte AntiParasitaire, Thiès, Senegal |
| authorships[16].institutions[0].id | https://openalex.org/I79793008 |
| authorships[16].institutions[0].ror | https://ror.org/05nfkgg69 |
| authorships[16].institutions[0].type | education |
| authorships[16].institutions[0].lineage | https://openalex.org/I79793008 |
| authorships[16].institutions[0].country_code | SN |
| authorships[16].institutions[0].display_name | Université de Thiès |
| authorships[16].author_position | middle |
| authorships[16].raw_author_name | Ngayo Sy |
| authorships[16].is_corresponding | False |
| authorships[16].raw_affiliation_strings | Service de Lutte AntiParasitaire, Thiès, Senegal |
| authorships[17].author.id | https://openalex.org/A5047819759 |
| authorships[17].author.orcid | https://orcid.org/0000-0002-9843-1890 |
| authorships[17].author.display_name | Pardis C. Sabeti |
| authorships[17].countries | US |
| authorships[17].affiliations[0].institution_ids | https://openalex.org/I107606265 |
| authorships[17].affiliations[0].raw_affiliation_string | Broad Institute of MIT and Harvard, Cambridge, MA, USA |
| authorships[17].institutions[0].id | https://openalex.org/I107606265 |
| authorships[17].institutions[0].ror | https://ror.org/05a0ya142 |
| authorships[17].institutions[0].type | nonprofit |
| authorships[17].institutions[0].lineage | https://openalex.org/I107606265 |
| authorships[17].institutions[0].country_code | US |
| authorships[17].institutions[0].display_name | Broad Institute |
| authorships[17].author_position | middle |
| authorships[17].raw_author_name | Pardis C. Sabeti |
| authorships[17].is_corresponding | False |
| authorships[17].raw_affiliation_strings | Broad Institute of MIT and Harvard, Cambridge, MA, USA |
| authorships[18].author.id | https://openalex.org/A5007893813 |
| authorships[18].author.orcid | https://orcid.org/0000-0002-1799-7295 |
| authorships[18].author.display_name | Katherine J. Siddle |
| authorships[18].countries | US |
| authorships[18].affiliations[0].institution_ids | https://openalex.org/I136199984 |
| authorships[18].affiliations[0].raw_affiliation_string | Department of Organismal and Evolutionary Biology, Harvard University, Cambridge, MA, USA |
| authorships[18].institutions[0].id | https://openalex.org/I136199984 |
| authorships[18].institutions[0].ror | https://ror.org/03vek6s52 |
| authorships[18].institutions[0].type | education |
| authorships[18].institutions[0].lineage | https://openalex.org/I136199984 |
| authorships[18].institutions[0].country_code | US |
| authorships[18].institutions[0].display_name | Harvard University |
| authorships[18].author_position | middle |
| authorships[18].raw_author_name | Katherine J. Siddle |
| authorships[18].is_corresponding | False |
| authorships[18].raw_affiliation_strings | Department of Organismal and Evolutionary Biology, Harvard University, Cambridge, MA, USA |
| authorships[19].author.id | https://openalex.org/A5113963931 |
| authorships[19].author.orcid | |
| authorships[19].author.display_name | Daouda Ndiaye |
| authorships[19].countries | SN |
| authorships[19].affiliations[0].institution_ids | https://openalex.org/I4210106377, https://openalex.org/I96840727 |
| authorships[19].affiliations[0].raw_affiliation_string | Laboratoire de Parasitologie-Mycologie, Hôpital Aristide le Dantec, Université Cheikh Anta Diop de Dakar, BP 16477, Dakar, Senegal |
| authorships[19].institutions[0].id | https://openalex.org/I96840727 |
| authorships[19].institutions[0].ror | https://ror.org/04je6yw13 |
| authorships[19].institutions[0].type | education |
| authorships[19].institutions[0].lineage | https://openalex.org/I96840727 |
| authorships[19].institutions[0].country_code | SN |
| authorships[19].institutions[0].display_name | Cheikh Anta Diop University |
| authorships[19].institutions[1].id | https://openalex.org/I4210106377 |
| authorships[19].institutions[1].ror | https://ror.org/01n1j0f20 |
| authorships[19].institutions[1].type | healthcare |
| authorships[19].institutions[1].lineage | https://openalex.org/I4210106377 |
| authorships[19].institutions[1].country_code | SN |
| authorships[19].institutions[1].display_name | Hôpital Aristide Le Dantec |
| authorships[19].author_position | last |
| authorships[19].raw_author_name | Daouda Ndiaye |
| authorships[19].is_corresponding | False |
| authorships[19].raw_affiliation_strings | Laboratoire de Parasitologie-Mycologie, Hôpital Aristide le Dantec, Université Cheikh Anta Diop de Dakar, BP 16477, Dakar, Senegal |
| has_content.pdf | True |
| has_content.grobid_xml | True |
| is_paratext | False |
| open_access.is_oa | True |
| open_access.oa_url | https://www.nature.com/articles/s41598-021-89070-1.pdf |
| open_access.oa_status | gold |
| open_access.any_repository_has_fulltext | False |
| created_date | 2025-10-10T00:00:00 |
| display_name | Genomic investigation of a dengue virus outbreak in Thiès, Senegal, in 2018 |
| has_fulltext | True |
| is_retracted | False |
| updated_date | 2025-11-23T05:10:03.516525 |
| primary_topic.id | https://openalex.org/T10166 |
| primary_topic.field.id | https://openalex.org/fields/27 |
| primary_topic.field.display_name | Medicine |
| primary_topic.score | 1.0 |
| primary_topic.domain.id | https://openalex.org/domains/4 |
| primary_topic.domain.display_name | Health Sciences |
| primary_topic.subfield.id | https://openalex.org/subfields/2739 |
| primary_topic.subfield.display_name | Public Health, Environmental and Occupational Health |
| primary_topic.display_name | Mosquito-borne diseases and control |
| related_works | https://openalex.org/W2399399246, https://openalex.org/W1585158025, https://openalex.org/W2131160889, https://openalex.org/W2775372485, https://openalex.org/W2149961808, https://openalex.org/W2549485495, https://openalex.org/W2021776701, https://openalex.org/W3004711645, https://openalex.org/W3156758060, https://openalex.org/W951912817 |
| cited_by_count | 30 |
| counts_by_year[0].year | 2025 |
| counts_by_year[0].cited_by_count | 5 |
| counts_by_year[1].year | 2024 |
| counts_by_year[1].cited_by_count | 9 |
| counts_by_year[2].year | 2023 |
| counts_by_year[2].cited_by_count | 7 |
| counts_by_year[3].year | 2022 |
| counts_by_year[3].cited_by_count | 7 |
| counts_by_year[4].year | 2021 |
| counts_by_year[4].cited_by_count | 2 |
| locations_count | 4 |
| best_oa_location.id | doi:10.1038/s41598-021-89070-1 |
| best_oa_location.is_oa | True |
| best_oa_location.source.id | https://openalex.org/S196734849 |
| best_oa_location.source.issn | 2045-2322 |
| best_oa_location.source.type | journal |
| best_oa_location.source.is_oa | True |
| best_oa_location.source.issn_l | 2045-2322 |
| best_oa_location.source.is_core | True |
| best_oa_location.source.is_in_doaj | True |
| best_oa_location.source.display_name | Scientific Reports |
| best_oa_location.source.host_organization | https://openalex.org/P4310319908 |
| best_oa_location.source.host_organization_name | Nature Portfolio |
| best_oa_location.source.host_organization_lineage | https://openalex.org/P4310319908 |
| best_oa_location.license | cc-by |
| best_oa_location.pdf_url | https://www.nature.com/articles/s41598-021-89070-1.pdf |
| best_oa_location.version | publishedVersion |
| best_oa_location.raw_type | journal-article |
| best_oa_location.license_id | https://openalex.org/licenses/cc-by |
| best_oa_location.is_accepted | True |
| best_oa_location.is_published | True |
| best_oa_location.raw_source_name | Scientific Reports |
| best_oa_location.landing_page_url | https://doi.org/10.1038/s41598-021-89070-1 |
| primary_location.id | doi:10.1038/s41598-021-89070-1 |
| primary_location.is_oa | True |
| primary_location.source.id | https://openalex.org/S196734849 |
| primary_location.source.issn | 2045-2322 |
| primary_location.source.type | journal |
| primary_location.source.is_oa | True |
| primary_location.source.issn_l | 2045-2322 |
| primary_location.source.is_core | True |
| primary_location.source.is_in_doaj | True |
| primary_location.source.display_name | Scientific Reports |
| primary_location.source.host_organization | https://openalex.org/P4310319908 |
| primary_location.source.host_organization_name | Nature Portfolio |
| primary_location.source.host_organization_lineage | https://openalex.org/P4310319908 |
| primary_location.license | cc-by |
| primary_location.pdf_url | https://www.nature.com/articles/s41598-021-89070-1.pdf |
| primary_location.version | publishedVersion |
| primary_location.raw_type | journal-article |
| primary_location.license_id | https://openalex.org/licenses/cc-by |
| primary_location.is_accepted | True |
| primary_location.is_published | True |
| primary_location.raw_source_name | Scientific Reports |
| primary_location.landing_page_url | https://doi.org/10.1038/s41598-021-89070-1 |
| publication_date | 2021-05-14 |
| publication_year | 2021 |
| referenced_works | https://openalex.org/W2131222241, https://openalex.org/W2058647993, https://openalex.org/W2765619750, https://openalex.org/W2045866616, https://openalex.org/W2157351664, https://openalex.org/W2911488860, https://openalex.org/W2126227618, https://openalex.org/W2899834590, https://openalex.org/W2900106738, https://openalex.org/W2603245055, https://openalex.org/W2766739944, https://openalex.org/W2920762429, https://openalex.org/W2782845311, https://openalex.org/W2756859181, https://openalex.org/W2290068677, https://openalex.org/W2000824758, https://openalex.org/W3035043866, https://openalex.org/W2993007687, https://openalex.org/W2569058236, https://openalex.org/W2902664755, https://openalex.org/W2619340142, https://openalex.org/W2473718396, https://openalex.org/W6893605782, https://openalex.org/W2950964375, https://openalex.org/W2126419817, https://openalex.org/W2111647009, https://openalex.org/W2951464304, https://openalex.org/W2207183215, https://openalex.org/W2807308836, https://openalex.org/W2028302194, https://openalex.org/W2794169242, https://openalex.org/W4300009021, https://openalex.org/W1970016671, https://openalex.org/W2161824746 |
| referenced_works_count | 34 |
| abstract_inverted_index.2 | 109 |
| abstract_inverted_index.3 | 90, 94 |
| abstract_inverted_index.4 | 104 |
| abstract_inverted_index.a | 4, 75 |
| abstract_inverted_index.17 | 56 |
| abstract_inverted_index.19 | 70 |
| abstract_inverted_index.In | 20, 66 |
| abstract_inverted_index.We | 88, 142 |
| abstract_inverted_index.by | 135 |
| abstract_inverted_index.in | 12, 47, 74, 83, 172, 184 |
| abstract_inverted_index.is | 3, 37, 133 |
| abstract_inverted_index.of | 43, 64, 72, 77, 127, 138, 157, 170, 182 |
| abstract_inverted_index.or | 152 |
| abstract_inverted_index.to | 30, 117 |
| abstract_inverted_index.we | 50, 68 |
| abstract_inverted_index.198 | 78 |
| abstract_inverted_index.and | 6, 14, 85, 108, 174 |
| abstract_inverted_index.did | 143 |
| abstract_inverted_index.for | 100, 159, 178 |
| abstract_inverted_index.its | 25 |
| abstract_inverted_index.not | 144 |
| abstract_inverted_index.the | 18, 40, 62, 96, 136, 155, 167, 176 |
| abstract_inverted_index.was | 95 |
| abstract_inverted_index.DENV | 59, 73, 93, 171, 183 |
| abstract_inverted_index.Here | 49 |
| abstract_inverted_index.West | 121, 185 |
| abstract_inverted_index.city | 63 |
| abstract_inverted_index.find | 145 |
| abstract_inverted_index.from | 55, 61, 120 |
| abstract_inverted_index.late | 21 |
| abstract_inverted_index.most | 97, 115 |
| abstract_inverted_index.need | 177 |
| abstract_inverted_index.were | 106, 111, 114 |
| abstract_inverted_index.with | 80, 148 |
| abstract_inverted_index.(12%) | 110 |
| abstract_inverted_index.(23%) | 105 |
| abstract_inverted_index.11/17 | 101 |
| abstract_inverted_index.2018, | 22 |
| abstract_inverted_index.2018. | 87 |
| abstract_inverted_index.DENV2 | 107 |
| abstract_inverted_index.about | 39 |
| abstract_inverted_index.cases | 60, 71 |
| abstract_inverted_index.clear | 146 |
| abstract_inverted_index.data. | 141 |
| abstract_inverted_index.date, | 31 |
| abstract_inverted_index.fever | 81 |
| abstract_inverted_index.known | 38, 168 |
| abstract_inverted_index.local | 125 |
| abstract_inverted_index.major | 5 |
| abstract_inverted_index.range | 169 |
| abstract_inverted_index.signs | 151 |
| abstract_inverted_index.these | 164 |
| abstract_inverted_index.total | 67 |
| abstract_inverted_index.viral | 53, 128 |
| abstract_inverted_index.virus | 2, 28, 45 |
| abstract_inverted_index.(65%), | 103 |
| abstract_inverted_index.(DENV) | 46 |
| abstract_inverted_index.DENV1. | 112 |
| abstract_inverted_index.Dengue | 1 |
| abstract_inverted_index.across | 17 |
| abstract_inverted_index.better | 179 |
| abstract_inverted_index.cohort | 76 |
| abstract_inverted_index.dengue | 27, 44 |
| abstract_inverted_index.expand | 166 |
| abstract_inverted_index.globe. | 19 |
| abstract_inverted_index.health | 10 |
| abstract_inverted_index.little | 36 |
| abstract_inverted_index.public | 9 |
| abstract_inverted_index.recent | 118 |
| abstract_inverted_index.report | 51 |
| abstract_inverted_index.tropic | 13 |
| abstract_inverted_index.Africa, | 122 |
| abstract_inverted_index.Africa. | 186 |
| abstract_inverted_index.October | 84 |
| abstract_inverted_index.Senegal | 23 |
| abstract_inverted_index.Thiès. | 65 |
| abstract_inverted_index.concern | 11 |
| abstract_inverted_index.febrile | 161 |
| abstract_inverted_index.genetic | 41 |
| abstract_inverted_index.genomes | 54 |
| abstract_inverted_index.genomic | 140, 180 |
| abstract_inverted_index.growing | 8 |
| abstract_inverted_index.largest | 26 |
| abstract_inverted_index.limited | 134 |
| abstract_inverted_index.ongoing | 124 |
| abstract_inverted_index.rapidly | 7 |
| abstract_inverted_index.regions | 16 |
| abstract_inverted_index.several | 33 |
| abstract_inverted_index.similar | 116 |
| abstract_inverted_index.testing | 158 |
| abstract_inverted_index.Abstract | 0 |
| abstract_inverted_index.However, | 35 |
| abstract_inverted_index.November | 86 |
| abstract_inverted_index.Overall, | 163 |
| abstract_inverted_index.Senegal, | 173 |
| abstract_inverted_index.Senegal. | 48 |
| abstract_inverted_index.clinical | 150 |
| abstract_inverted_index.complete | 52 |
| abstract_inverted_index.covering | 32 |
| abstract_inverted_index.detailed | 131 |
| abstract_inverted_index.detected | 89 |
| abstract_inverted_index.findings | 165 |
| abstract_inverted_index.frequent | 98 |
| abstract_inverted_index.however, | 130 |
| abstract_inverted_index.outbreak | 29 |
| abstract_inverted_index.regions. | 34 |
| abstract_inverted_index.reported | 149 |
| abstract_inverted_index.scarcity | 137 |
| abstract_inverted_index.Sequences | 113 |
| abstract_inverted_index.available | 139 |
| abstract_inverted_index.collected | 82 |
| abstract_inverted_index.diseases. | 162 |
| abstract_inverted_index.diversity | 42 |
| abstract_inverted_index.inference | 132 |
| abstract_inverted_index.sequences | 102, 119 |
| abstract_inverted_index.subtropic | 15 |
| abstract_inverted_index.symptoms, | 153 |
| abstract_inverted_index.accounting | 99 |
| abstract_inverted_index.diagnosing | 160 |
| abstract_inverted_index.identified | 69 |
| abstract_inverted_index.importance | 156 |
| abstract_inverted_index.previously | 57 |
| abstract_inverted_index.serotypes; | 92 |
| abstract_inverted_index.suggesting | 123 |
| abstract_inverted_index.underscore | 175 |
| abstract_inverted_index.undetected | 58 |
| abstract_inverted_index.circulation | 126 |
| abstract_inverted_index.experienced | 24 |
| abstract_inverted_index.individuals | 79 |
| abstract_inverted_index.associations | 147 |
| abstract_inverted_index.highlighting | 154 |
| abstract_inverted_index.populations; | 129 |
| abstract_inverted_index.co-circulating | 91 |
| abstract_inverted_index.characterization | 181 |
| cited_by_percentile_year.max | 99 |
| cited_by_percentile_year.min | 93 |
| countries_distinct_count | 2 |
| institutions_distinct_count | 20 |
| sustainable_development_goals[0].id | https://metadata.un.org/sdg/3 |
| sustainable_development_goals[0].score | 0.8100000023841858 |
| sustainable_development_goals[0].display_name | Good health and well-being |
| citation_normalized_percentile.value | 0.95427257 |
| citation_normalized_percentile.is_in_top_1_percent | False |
| citation_normalized_percentile.is_in_top_10_percent | True |