HRRD: a manually-curated database about the regulatory relationship between HPV and host RNA Article Swipe
Bingqing Yan
,
Siwei Zhang
,
Siyang Yu
,
S. Hussain
,
Tianyang Liu
,
Bozhi Wang
,
Xiaoyu Dong
,
Fen Ma
,
Lanlan Wei
·
YOU?
·
· 2020
· Open Access
·
· DOI: https://doi.org/10.1038/s41598-020-76719-6
YOU?
·
· 2020
· Open Access
·
· DOI: https://doi.org/10.1038/s41598-020-76719-6
HPV (Human papilloma virus) is a kind of small double-stranded DNA viruses which is extremely associated with different cancers. The roles HPV plays in the host were gradually identified through the interaction between it (including its early genes) and host RNA. In recent years, increasing numbers of studies in HPV-related cancers have been published showing the relationship between HPV and host RNA. Here, we present a database named HRRD, which contains the regulatory relationship between HPV and RNA (mRNA, miRNA and lncRNA). The information was extracted from 10,761 papers in PubMed (up to December 1st, 2019). In addition, the sequence map of HPV (198 genotypes) is also contained. HRRD was designed as a user-friendly web-based interface for data retrieval. It integrated the information of interaction between HPV and RNA, which reflects the relationship between HPV and host. We hope HRRD will further provide a comprehensive understanding of HPV in carcinogenesis and prognosis. HRRD is freely accessible at www.hmuhrrd.com/HRRD .
Related Topics
Concepts
RNA
Host (biology)
microRNA
Carcinogenesis
Gene
Biology
Computational biology
Human papilloma virus
Cancer
Bioinformatics
Genetics
Cervical cancer
Metadata
- Type
- article
- Language
- en
- Landing Page
- https://doi.org/10.1038/s41598-020-76719-6
- https://www.nature.com/articles/s41598-020-76719-6.pdf
- OA Status
- gold
- Cited By
- 2
- References
- 13
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W3104572038
All OpenAlex metadata
Raw OpenAlex JSON
- OpenAlex ID
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https://openalex.org/W3104572038Canonical identifier for this work in OpenAlex
- DOI
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https://doi.org/10.1038/s41598-020-76719-6Digital Object Identifier
- Title
-
HRRD: a manually-curated database about the regulatory relationship between HPV and host RNAWork title
- Type
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articleOpenAlex work type
- Language
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enPrimary language
- Publication year
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2020Year of publication
- Publication date
-
2020-11-11Full publication date if available
- Authors
-
Bingqing Yan, Siwei Zhang, Siyang Yu, S. Hussain, Tianyang Liu, Bozhi Wang, Xiaoyu Dong, Fen Ma, Lanlan WeiList of authors in order
- Landing page
-
https://doi.org/10.1038/s41598-020-76719-6Publisher landing page
- PDF URL
-
https://www.nature.com/articles/s41598-020-76719-6.pdfDirect link to full text PDF
- Open access
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YesWhether a free full text is available
- OA status
-
goldOpen access status per OpenAlex
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https://www.nature.com/articles/s41598-020-76719-6.pdfDirect OA link when available
- Concepts
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RNA, Host (biology), microRNA, Carcinogenesis, Gene, Biology, Computational biology, Human papilloma virus, Cancer, Bioinformatics, Genetics, Cervical cancerTop concepts (fields/topics) attached by OpenAlex
- Cited by
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2Total citation count in OpenAlex
- Citations by year (recent)
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2024: 1, 2022: 1Per-year citation counts (last 5 years)
- References (count)
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13Number of works referenced by this work
- Related works (count)
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10Other works algorithmically related by OpenAlex
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