Ibp-Database And Environmental Ibp Sequences For Functional Analysis Of Microalgae Article Swipe
Christiane Uhlig
,
Fabian Kilpert
,
Stephan Frickenhaus
,
Jessica Kegel
,
Andreas Krell
,
Thomas Möck
,
Klaus-Ulrich Valentin
,
Bánk Beszteri
·
YOU?
·
· 2017
· Open Access
·
· DOI: https://doi.org/10.5281/zenodo.839823
YOU?
·
· 2017
· Open Access
·
· DOI: https://doi.org/10.5281/zenodo.839823
Database for analysis of ice binding protein (IBP) sequences (Uhlig et al. (2015)): (1) DUF3494_seqs_Uniprot.fasta: full length sequences with DUF3494 domain used for the calculation of the backbone tree in the phylogenetic placement (2) env_IBPs.fasta: potential IBP sequences from one Arctic and five Antarctic sea ice metatranscriptomes (Sanger or 454) (3) DUF3494_substree_fig2a_UniprotIDs.txt: UniProtIDs for subtree in Fig 2a (4) DUF3494_confirmed_IBPactivity_UniprotIDs.txt: UniProtIDs for sequences with confirmed IBP function of the protein If using this dataset please cite the following publication: Uhlig, C., Kilpert, F., Frickenhaus, S., Kegel, J.U., Krell, A., Mock, T., Valentin, K., Beszteri, B., (2015) The significance of antifreeze proteins for eukaryotic microbial communities of Arctic and Antarctic sea ice, The ISME Journal, 9, 2537–2540, doi:10.1038/ismej.2015.43
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All OpenAlex metadata
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https://doi.org/10.5281/zenodo.839823Digital Object Identifier
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Ibp-Database And Environmental Ibp Sequences For Functional Analysis Of MicroalgaeWork title
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datasetOpenAlex work type
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enPrimary language
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2017Year of publication
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2017-08-15Full publication date if available
- Authors
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Christiane Uhlig, Fabian Kilpert, Stephan Frickenhaus, Jessica Kegel, Andreas Krell, Thomas Möck, Klaus-Ulrich Valentin, Bánk BeszteriList of authors in order
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https://doi.org/10.5281/zenodo.839823Publisher landing page
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YesWhether a free full text is available
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greenOpen access status per OpenAlex
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https://doi.org/10.5281/zenodo.839823Direct OA link when available
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Database, Computer scienceTop concepts (fields/topics) attached by OpenAlex
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0Total citation count in OpenAlex
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10Other works algorithmically related by OpenAlex
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| abstract_inverted_index.proteins | 100 |
| abstract_inverted_index.Antarctic | 43, 108 |
| abstract_inverted_index.Beszteri, | 93 |
| abstract_inverted_index.Valentin, | 91 |
| abstract_inverted_index.confirmed | 64 |
| abstract_inverted_index.following | 77 |
| abstract_inverted_index.microbial | 103 |
| abstract_inverted_index.placement | 32 |
| abstract_inverted_index.potential | 35 |
| abstract_inverted_index.sequences | 8, 17, 37, 62 |
| abstract_inverted_index.UniProtIDs | 52, 60 |
| abstract_inverted_index.antifreeze | 99 |
| abstract_inverted_index.eukaryotic | 102 |
| abstract_inverted_index.calculation | 24 |
| abstract_inverted_index.communities | 104 |
| abstract_inverted_index.2537–2540, | 115 |
| abstract_inverted_index.Frickenhaus, | 83 |
| abstract_inverted_index.phylogenetic | 31 |
| abstract_inverted_index.publication: | 78 |
| abstract_inverted_index.significance | 97 |
| abstract_inverted_index.env_IBPs.fasta: | 34 |
| abstract_inverted_index.metatranscriptomes | 46 |
| abstract_inverted_index.doi:10.1038/ismej.2015.43 | 116 |
| abstract_inverted_index.DUF3494_seqs_Uniprot.fasta: | 14 |
| abstract_inverted_index.DUF3494_substree_fig2a_UniprotIDs.txt: | 51 |
| abstract_inverted_index.DUF3494_confirmed_IBPactivity_UniprotIDs.txt: | 59 |
| cited_by_percentile_year | |
| countries_distinct_count | 2 |
| institutions_distinct_count | 8 |
| citation_normalized_percentile |