Identification of genetic factors controlling domestication-related traits in cowpea (Vigna unguiculataL. Walp) Article Swipe
Sassoum Lô
,
María Muñoz‐Amatriaín
,
Ousmane Boukar
,
Ira A. Herniter
,
Ndiaga Cissé
,
Yining Guo
,
Philip A. Roberts
,
Shizhong Xu
,
Christian Fatokun
,
Timothy J. Close
·
YOU?
·
· 2017
· Open Access
·
· DOI: https://doi.org/10.1101/202044
YOU?
·
· 2017
· Open Access
·
· DOI: https://doi.org/10.1101/202044
Cowpea ( Vigna unguiculata L. Walp) is a warm-season legume with a genetically diverse gene-pool composed of wild and cultivated forms. Cowpea domestication involved considerable phenotypic changes from the wild progenitor, including reduction of pod shattering, increased organ size, and changes in flowering time. Little is known about the genetic basis underlying these changes. In this study, 215 recombinant inbred lines derived from a cross between a cultivated and a wild cowpea accession were used to evaluate nine domestication-related traits (pod shattering, peduncle length, flower color, flowering time, 100-seed weight, pod length, leaf length, leaf width and seed number per pod). A high-density genetic map containing 17,739 single nucleotide polymorphisms was constructed and used to identify 16 quantitative trait loci (QTL) for these nine domestication-related traits. Candidate genes underlying each of those 16 QTL were identified. Four regions with clusters of QTL were identified, including one on chromosome 8 related to increased organ size. This study provides new knowledge of the genomic regions controlling domestication-related traits in cowpea as well as candidate genes underlying those QTL. This information can help to exploit wild relatives in cowpea breeding programs. Key message This study identified regions of the cowpea genome that played an important role in cowpea domestication, including a hotspot region for increased organ size
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Metadata
- Type
- preprint
- Language
- en
- Landing Page
- https://doi.org/10.1101/202044
- https://www.biorxiv.org/content/biorxiv/early/2017/10/13/202044.full.pdf
- OA Status
- green
- Cited By
- 6
- References
- 57
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W2761708398
All OpenAlex metadata
Raw OpenAlex JSON
- OpenAlex ID
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https://openalex.org/W2761708398Canonical identifier for this work in OpenAlex
- DOI
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https://doi.org/10.1101/202044Digital Object Identifier
- Title
-
Identification of genetic factors controlling domestication-related traits in cowpea (Vigna unguiculataL. Walp)Work title
- Type
-
preprintOpenAlex work type
- Language
-
enPrimary language
- Publication year
-
2017Year of publication
- Publication date
-
2017-10-13Full publication date if available
- Authors
-
Sassoum Lô, María Muñoz‐Amatriaín, Ousmane Boukar, Ira A. Herniter, Ndiaga Cissé, Yining Guo, Philip A. Roberts, Shizhong Xu, Christian Fatokun, Timothy J. CloseList of authors in order
- Landing page
-
https://doi.org/10.1101/202044Publisher landing page
- PDF URL
-
https://www.biorxiv.org/content/biorxiv/early/2017/10/13/202044.full.pdfDirect link to full text PDF
- Open access
-
YesWhether a free full text is available
- OA status
-
greenOpen access status per OpenAlex
- OA URL
-
https://www.biorxiv.org/content/biorxiv/early/2017/10/13/202044.full.pdfDirect OA link when available
- Concepts
-
Domestication, Vigna, Biology, Quantitative trait locus, Candidate gene, Point of delivery, Inbred strain, Gene, Agronomy, GeneticsTop concepts (fields/topics) attached by OpenAlex
- Cited by
-
6Total citation count in OpenAlex
- Citations by year (recent)
-
2024: 2, 2018: 4Per-year citation counts (last 5 years)
- References (count)
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57Number of works referenced by this work
- Related works (count)
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10Other works algorithmically related by OpenAlex
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