Identification of motif-based interactions between SARS-CoV-2 protein domains and human peptide ligands pinpoint antiviral targets Article Swipe

PDF

Filip Mihalič , Caroline Benz , Eszter Kassa , Richard Lindqvist , Leandro Simonetti , Raviteja Inturi , Hanna Aronsson , Eva Andersson , N. Celestine , Norman E. Davey , Anna K. Överby , Per Jemth , Ylva Ivarsson ·

YOU? · · 2023 · Open Access · · DOI: https://doi.org/10.1038/s41467-023-41312-8

Related Topics

Computational Biology

Infectious Diseases (Medical Specialty)

Concepts

Computational biology Peptide Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) Identification (biology) Coronavirus disease 2019 (COVID-19) Motif (music) Biology Virology Medicine Biochemistry Infectious disease (medical specialty) Botany Disease Acoustics Physics Pathology

Metadata

Type: article
Language: en
Landing Page: https://doi.org/10.1038/s41467-023-41312-8
PDF: https://www.nature.com/articles/s41467-023-41312-8.pdf
OA Status: gold
Cited By: 21
References: 130
Related Works: 10
OpenAlex ID: https://openalex.org/W4386715654

All OpenAlex metadata

Raw OpenAlex JSON

OpenAlex ID: https://openalex.org/W4386715654

Canonical identifier for this work in OpenAlex
DOI: https://doi.org/10.1038/s41467-023-41312-8

Digital Object Identifier
Title: Identification of motif-based interactions between SARS-CoV-2 protein domains and human peptide ligands pinpoint antiviral targets

Work title
Type: article

OpenAlex work type
Language: en

Primary language
Publication year: 2023

Year of publication
Publication date: 2023-09-13

Full publication date if available
Authors: Filip Mihalič, Caroline Benz, Eszter Kassa, Richard Lindqvist, Leandro Simonetti, Raviteja Inturi, Hanna Aronsson, Eva Andersson, N. Celestine, Norman E. Davey, Anna K. Överby, Per Jemth, Ylva Ivarsson

List of authors in order
Landing page: https://doi.org/10.1038/s41467-023-41312-8

Publisher landing page
PDF URL: https://www.nature.com/articles/s41467-023-41312-8.pdf

Direct link to full text PDF
Open access: Yes

Whether a free full text is available
OA status: gold

Open access status per OpenAlex
OA URL: https://www.nature.com/articles/s41467-023-41312-8.pdf

Direct OA link when available
Concepts: Computational biology, Peptide, Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), Identification (biology), Coronavirus disease 2019 (COVID-19), Motif (music), Biology, Virology, Medicine, Biochemistry, Infectious disease (medical specialty), Botany, Disease, Acoustics, Physics, Pathology

Top concepts (fields/topics) attached by OpenAlex
Cited by: 21

Total citation count in OpenAlex
Citations by year (recent): 2025: 6, 2024: 13, 2023: 2

Per-year citation counts (last 5 years)
References (count): 130

Number of works referenced by this work
Related works (count): 10

Other works algorithmically related by OpenAlex

Full payload

id	https://openalex.org/W4386715654
doi	https://doi.org/10.1038/s41467-023-41312-8
ids.doi	https://doi.org/10.1038/s41467-023-41312-8
ids.pmid	https://pubmed.ncbi.nlm.nih.gov/37704626
ids.openalex	https://openalex.org/W4386715654
fwci	5.91516782
mesh[0].qualifier_ui
mesh[0].descriptor_ui	D006801
mesh[0].is_major_topic	False
mesh[0].qualifier_name
mesh[0].descriptor_name	Humans
mesh[1].qualifier_ui	Q000494
mesh[1].descriptor_ui	D000998
mesh[1].is_major_topic	True
mesh[1].qualifier_name	pharmacology
mesh[1].descriptor_name	Antiviral Agents
mesh[2].qualifier_ui
mesh[2].descriptor_ui	D000072417
mesh[2].is_major_topic	False
mesh[2].qualifier_name
mesh[2].descriptor_name	Protein Domains
mesh[3].qualifier_ui
mesh[3].descriptor_ui	D000086402
mesh[3].is_major_topic	False
mesh[3].qualifier_name
mesh[3].descriptor_name	SARS-CoV-2
mesh[4].qualifier_ui
mesh[4].descriptor_ui	D008024
mesh[4].is_major_topic	False
mesh[4].qualifier_name
mesh[4].descriptor_name	Ligands
mesh[5].qualifier_ui
mesh[5].descriptor_ui	D040901
mesh[5].is_major_topic	False
mesh[5].qualifier_name
mesh[5].descriptor_name	Proteomics
mesh[6].qualifier_ui
mesh[6].descriptor_ui	D000086382
mesh[6].is_major_topic	True
mesh[6].qualifier_name
mesh[6].descriptor_name	COVID-19
mesh[7].qualifier_ui	Q000494
mesh[7].descriptor_ui	D010455
mesh[7].is_major_topic	False
mesh[7].qualifier_name	pharmacology
mesh[7].descriptor_name	Peptides
mesh[8].qualifier_ui
mesh[8].descriptor_ui	D006801
mesh[8].is_major_topic	False
mesh[8].qualifier_name
mesh[8].descriptor_name	Humans
mesh[9].qualifier_ui	Q000494
mesh[9].descriptor_ui	D000998
mesh[9].is_major_topic	True
mesh[9].qualifier_name	pharmacology
mesh[9].descriptor_name	Antiviral Agents
mesh[10].qualifier_ui
mesh[10].descriptor_ui	D000072417
mesh[10].is_major_topic	False
mesh[10].qualifier_name
mesh[10].descriptor_name	Protein Domains
mesh[11].qualifier_ui
mesh[11].descriptor_ui	D000086402
mesh[11].is_major_topic	False
mesh[11].qualifier_name
mesh[11].descriptor_name	SARS-CoV-2
mesh[12].qualifier_ui
mesh[12].descriptor_ui	D008024
mesh[12].is_major_topic	False
mesh[12].qualifier_name
mesh[12].descriptor_name	Ligands
mesh[13].qualifier_ui
mesh[13].descriptor_ui	D040901
mesh[13].is_major_topic	False
mesh[13].qualifier_name
mesh[13].descriptor_name	Proteomics
mesh[14].qualifier_ui
mesh[14].descriptor_ui	D000086382
mesh[14].is_major_topic	True
mesh[14].qualifier_name
mesh[14].descriptor_name	COVID-19
mesh[15].qualifier_ui	Q000494
mesh[15].descriptor_ui	D010455
mesh[15].is_major_topic	False
mesh[15].qualifier_name	pharmacology
mesh[15].descriptor_name	Peptides
mesh[16].qualifier_ui
mesh[16].descriptor_ui	D006801
mesh[16].is_major_topic	False
mesh[16].qualifier_name
mesh[16].descriptor_name	Humans
mesh[17].qualifier_ui	Q000494
mesh[17].descriptor_ui	D000998
mesh[17].is_major_topic	True
mesh[17].qualifier_name	pharmacology
mesh[17].descriptor_name	Antiviral Agents
mesh[18].qualifier_ui
mesh[18].descriptor_ui	D000072417
mesh[18].is_major_topic	False
mesh[18].qualifier_name
mesh[18].descriptor_name	Protein Domains
mesh[19].qualifier_ui
mesh[19].descriptor_ui	D000086402
mesh[19].is_major_topic	False
mesh[19].qualifier_name
mesh[19].descriptor_name	SARS-CoV-2
mesh[20].qualifier_ui
mesh[20].descriptor_ui	D008024
mesh[20].is_major_topic	False
mesh[20].qualifier_name
mesh[20].descriptor_name	Ligands
mesh[21].qualifier_ui
mesh[21].descriptor_ui	D040901
mesh[21].is_major_topic	False
mesh[21].qualifier_name
mesh[21].descriptor_name	Proteomics
mesh[22].qualifier_ui
mesh[22].descriptor_ui	D000086382
mesh[22].is_major_topic	True
mesh[22].qualifier_name
mesh[22].descriptor_name	COVID-19
mesh[23].qualifier_ui	Q000494
mesh[23].descriptor_ui	D010455
mesh[23].is_major_topic	False
mesh[23].qualifier_name	pharmacology
mesh[23].descriptor_name	Peptides
mesh[24].qualifier_ui
mesh[24].descriptor_ui	D006801
mesh[24].is_major_topic	False
mesh[24].qualifier_name
mesh[24].descriptor_name	Humans
mesh[25].qualifier_ui	Q000494
mesh[25].descriptor_ui	D000998
mesh[25].is_major_topic	True
mesh[25].qualifier_name	pharmacology
mesh[25].descriptor_name	Antiviral Agents
mesh[26].qualifier_ui
mesh[26].descriptor_ui	D000072417
mesh[26].is_major_topic	False
mesh[26].qualifier_name
mesh[26].descriptor_name	Protein Domains
mesh[27].qualifier_ui
mesh[27].descriptor_ui	D000086402
mesh[27].is_major_topic	False
mesh[27].qualifier_name
mesh[27].descriptor_name	SARS-CoV-2
mesh[28].qualifier_ui
mesh[28].descriptor_ui	D008024
mesh[28].is_major_topic	False
mesh[28].qualifier_name
mesh[28].descriptor_name	Ligands
mesh[29].qualifier_ui
mesh[29].descriptor_ui	D040901
mesh[29].is_major_topic	False
mesh[29].qualifier_name
mesh[29].descriptor_name	Proteomics
mesh[30].qualifier_ui
mesh[30].descriptor_ui	D000086382
mesh[30].is_major_topic	True
mesh[30].qualifier_name
mesh[30].descriptor_name	COVID-19
mesh[31].qualifier_ui	Q000494
mesh[31].descriptor_ui	D010455
mesh[31].is_major_topic	False
mesh[31].qualifier_name	pharmacology
mesh[31].descriptor_name	Peptides
type	article
title	Identification of motif-based interactions between SARS-CoV-2 protein domains and human peptide ligands pinpoint antiviral targets
awards[0].id	https://openalex.org/G7753565494
awards[0].funder_id	https://openalex.org/F4320322581
awards[0].funder_award_id	2020-03380
awards[0].funder_display_name	Vetenskapsrådet
awards[1].id	https://openalex.org/G565803117
awards[1].funder_id	https://openalex.org/F4320320940
awards[1].funder_award_id	SB16-0039
awards[1].funder_display_name	Stiftelsen för Strategisk Forskning
awards[2].id	https://openalex.org/G2071410612
awards[2].funder_id	https://openalex.org/F4320319985
awards[2].funder_award_id	C68484/A28159
awards[2].funder_display_name	Cancer Research UK
awards[3].id	https://openalex.org/G798506660
awards[3].funder_id	https://openalex.org/F4320322581
awards[3].funder_award_id	2018-05851
awards[3].funder_display_name	Vetenskapsrådet
biblio.issue	1
biblio.volume	14
biblio.last_page	5636
biblio.first_page	5636
grants[0].funder	https://openalex.org/F4320319985
grants[0].award_id	C68484/A28159
grants[0].funder_display_name	Cancer Research UK
grants[1].funder	https://openalex.org/F4320320940
grants[1].award_id	SB16-0039
grants[1].funder_display_name	Stiftelsen för Strategisk Forskning
grants[2].funder	https://openalex.org/F4320322581
grants[2].award_id	2018-05851
grants[2].funder_display_name	Vetenskapsrådet
grants[3].funder	https://openalex.org/F4320322581
grants[3].award_id	2020-03380
grants[3].funder_display_name	Vetenskapsrådet
topics[0].id	https://openalex.org/T10118
topics[0].field.id	https://openalex.org/fields/27
topics[0].field.display_name	Medicine
topics[0].score	0.9994999766349792
topics[0].domain.id	https://openalex.org/domains/4
topics[0].domain.display_name	Health Sciences
topics[0].subfield.id	https://openalex.org/subfields/2725
topics[0].subfield.display_name	Infectious Diseases
topics[0].display_name	SARS-CoV-2 and COVID-19 Research
topics[1].id	https://openalex.org/T11668
topics[1].field.id	https://openalex.org/fields/24
topics[1].field.display_name	Immunology and Microbiology
topics[1].score	0.9987999796867371
topics[1].domain.id	https://openalex.org/domains/1
topics[1].domain.display_name	Life Sciences
topics[1].subfield.id	https://openalex.org/subfields/2403
topics[1].subfield.display_name	Immunology
topics[1].display_name	interferon and immune responses
topics[2].id	https://openalex.org/T12576
topics[2].field.id	https://openalex.org/fields/13
topics[2].field.display_name	Biochemistry, Genetics and Molecular Biology
topics[2].score	0.9980000257492065
topics[2].domain.id	https://openalex.org/domains/1
topics[2].domain.display_name	Life Sciences
topics[2].subfield.id	https://openalex.org/subfields/1312
topics[2].subfield.display_name	Molecular Biology
topics[2].display_name	vaccines and immunoinformatics approaches
funders[0].id	https://openalex.org/F4320319985
funders[0].ror	https://ror.org/054225q67
funders[0].display_name	Cancer Research UK
funders[1].id	https://openalex.org/F4320320940
funders[1].ror	https://ror.org/044wr7g58
funders[1].display_name	Stiftelsen för Strategisk Forskning
funders[2].id	https://openalex.org/F4320322581
funders[2].ror	https://ror.org/03zttf063
funders[2].display_name	Vetenskapsrådet
is_xpac	False
apc_list.value	3920
apc_list.currency	GBP
apc_list.value_usd	4808
apc_paid.value	3920
apc_paid.currency	GBP
apc_paid.value_usd	4808
concepts[0].id	https://openalex.org/C70721500
concepts[0].level	1
concepts[0].score	0.5955869555473328
concepts[0].wikidata	https://www.wikidata.org/wiki/Q177005
concepts[0].display_name	Computational biology
concepts[1].id	https://openalex.org/C2779281246
concepts[1].level	2
concepts[1].score	0.5804433226585388
concepts[1].wikidata	https://www.wikidata.org/wiki/Q172847
concepts[1].display_name	Peptide
concepts[2].id	https://openalex.org/C3007834351
concepts[2].level	5
concepts[2].score	0.5587323904037476
concepts[2].wikidata	https://www.wikidata.org/wiki/Q82069695
concepts[2].display_name	Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
concepts[3].id	https://openalex.org/C116834253
concepts[3].level	2
concepts[3].score	0.5312808752059937
concepts[3].wikidata	https://www.wikidata.org/wiki/Q2039217
concepts[3].display_name	Identification (biology)
concepts[4].id	https://openalex.org/C3008058167
concepts[4].level	4
concepts[4].score	0.4406561255455017
concepts[4].wikidata	https://www.wikidata.org/wiki/Q84263196
concepts[4].display_name	Coronavirus disease 2019 (COVID-19)
concepts[5].id	https://openalex.org/C32276052
concepts[5].level	2
concepts[5].score	0.41350144147872925
concepts[5].wikidata	https://www.wikidata.org/wiki/Q908349
concepts[5].display_name	Motif (music)
concepts[6].id	https://openalex.org/C86803240
concepts[6].level	0
concepts[6].score	0.3780212998390198
concepts[6].wikidata	https://www.wikidata.org/wiki/Q420
concepts[6].display_name	Biology
concepts[7].id	https://openalex.org/C159047783
concepts[7].level	1
concepts[7].score	0.3688591718673706
concepts[7].wikidata	https://www.wikidata.org/wiki/Q7215
concepts[7].display_name	Virology
concepts[8].id	https://openalex.org/C71924100
concepts[8].level	0
concepts[8].score	0.2039927840232849
concepts[8].wikidata	https://www.wikidata.org/wiki/Q11190
concepts[8].display_name	Medicine
concepts[9].id	https://openalex.org/C55493867
concepts[9].level	1
concepts[9].score	0.16485583782196045
concepts[9].wikidata	https://www.wikidata.org/wiki/Q7094
concepts[9].display_name	Biochemistry
concepts[10].id	https://openalex.org/C524204448
concepts[10].level	3
concepts[10].score	0.1313500702381134
concepts[10].wikidata	https://www.wikidata.org/wiki/Q788926
concepts[10].display_name	Infectious disease (medical specialty)
concepts[11].id	https://openalex.org/C59822182
concepts[11].level	1
concepts[11].score	0.0
concepts[11].wikidata	https://www.wikidata.org/wiki/Q441
concepts[11].display_name	Botany
concepts[12].id	https://openalex.org/C2779134260
concepts[12].level	2
concepts[12].score	0.0
concepts[12].wikidata	https://www.wikidata.org/wiki/Q12136
concepts[12].display_name	Disease
concepts[13].id	https://openalex.org/C24890656
concepts[13].level	1
concepts[13].score	0.0
concepts[13].wikidata	https://www.wikidata.org/wiki/Q82811
concepts[13].display_name	Acoustics
concepts[14].id	https://openalex.org/C121332964
concepts[14].level	0
concepts[14].score	0.0
concepts[14].wikidata	https://www.wikidata.org/wiki/Q413
concepts[14].display_name	Physics
concepts[15].id	https://openalex.org/C142724271
concepts[15].level	1
concepts[15].score	0.0
concepts[15].wikidata	https://www.wikidata.org/wiki/Q7208
concepts[15].display_name	Pathology
keywords[0].id	https://openalex.org/keywords/computational-biology
keywords[0].score	0.5955869555473328
keywords[0].display_name	Computational biology
keywords[1].id	https://openalex.org/keywords/peptide
keywords[1].score	0.5804433226585388
keywords[1].display_name	Peptide
keywords[2].id	https://openalex.org/keywords/severe-acute-respiratory-syndrome-coronavirus-2
keywords[2].score	0.5587323904037476
keywords[2].display_name	Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
keywords[3].id	https://openalex.org/keywords/identification
keywords[3].score	0.5312808752059937
keywords[3].display_name	Identification (biology)
keywords[4].id	https://openalex.org/keywords/coronavirus-disease-2019
keywords[4].score	0.4406561255455017
keywords[4].display_name	Coronavirus disease 2019 (COVID-19)
keywords[5].id	https://openalex.org/keywords/motif
keywords[5].score	0.41350144147872925
keywords[5].display_name	Motif (music)
keywords[6].id	https://openalex.org/keywords/biology
keywords[6].score	0.3780212998390198
keywords[6].display_name	Biology
keywords[7].id	https://openalex.org/keywords/virology
keywords[7].score	0.3688591718673706
keywords[7].display_name	Virology
keywords[8].id	https://openalex.org/keywords/medicine
keywords[8].score	0.2039927840232849
keywords[8].display_name	Medicine
keywords[9].id	https://openalex.org/keywords/biochemistry
keywords[9].score	0.16485583782196045
keywords[9].display_name	Biochemistry
keywords[10].id	https://openalex.org/keywords/infectious-disease
keywords[10].score	0.1313500702381134
keywords[10].display_name	Infectious disease (medical specialty)
language	en
locations[0].id	doi:10.1038/s41467-023-41312-8
locations[0].is_oa	True
locations[0].source.id	https://openalex.org/S64187185
locations[0].source.issn	2041-1723
locations[0].source.type	journal
locations[0].source.is_oa	True
locations[0].source.issn_l	2041-1723
locations[0].source.is_core	True
locations[0].source.is_in_doaj	True
locations[0].source.display_name	Nature Communications
locations[0].source.host_organization	https://openalex.org/P4310319908
locations[0].source.host_organization_name	Nature Portfolio
locations[0].source.host_organization_lineage	https://openalex.org/P4310319908
locations[0].license	cc-by
locations[0].pdf_url	https://www.nature.com/articles/s41467-023-41312-8.pdf
locations[0].version	publishedVersion
locations[0].raw_type	journal-article
locations[0].license_id	https://openalex.org/licenses/cc-by
locations[0].is_accepted	True
locations[0].is_published	True
locations[0].raw_source_name	Nature Communications
locations[0].landing_page_url	https://doi.org/10.1038/s41467-023-41312-8
locations[1].id	pmid:37704626
locations[1].is_oa	False
locations[1].source.id	https://openalex.org/S4306525036
locations[1].source.issn
locations[1].source.type	repository
locations[1].source.is_oa	False
locations[1].source.issn_l
locations[1].source.is_core	False
locations[1].source.is_in_doaj	False
locations[1].source.display_name	PubMed
locations[1].source.host_organization	https://openalex.org/I1299303238
locations[1].source.host_organization_name	National Institutes of Health
locations[1].source.host_organization_lineage	https://openalex.org/I1299303238
locations[1].license
locations[1].pdf_url
locations[1].version	publishedVersion
locations[1].raw_type
locations[1].license_id
locations[1].is_accepted	True
locations[1].is_published	True
locations[1].raw_source_name	Nature communications
locations[1].landing_page_url	https://pubmed.ncbi.nlm.nih.gov/37704626
locations[2].id	pmh:oai:pubmedcentral.nih.gov:10499821
locations[2].is_oa	True
locations[2].source.id	https://openalex.org/S2764455111
locations[2].source.issn
locations[2].source.type	repository
locations[2].source.is_oa	False
locations[2].source.issn_l
locations[2].source.is_core	False
locations[2].source.is_in_doaj	False
locations[2].source.display_name	PubMed Central
locations[2].source.host_organization	https://openalex.org/I1299303238
locations[2].source.host_organization_name	National Institutes of Health
locations[2].source.host_organization_lineage	https://openalex.org/I1299303238
locations[2].license	cc-by
locations[2].pdf_url	https://pmc.ncbi.nlm.nih.gov/articles/PMC10499821/pdf/41467_2023_Article_41312.pdf
locations[2].version	submittedVersion
locations[2].raw_type	Text
locations[2].license_id	https://openalex.org/licenses/cc-by
locations[2].is_accepted	False
locations[2].is_published	False
locations[2].raw_source_name	Nat Commun
locations[2].landing_page_url	https://www.ncbi.nlm.nih.gov/pmc/articles/10499821
locations[3].id	pmh:oai:DiVA.org:umu-214614
locations[3].is_oa	True
locations[3].source.id	https://openalex.org/S4306400013
locations[3].source.issn
locations[3].source.type	repository
locations[3].source.is_oa	False
locations[3].source.issn_l
locations[3].source.is_core	False
locations[3].source.is_in_doaj	False
locations[3].source.display_name	Publications (Konstfack University of Arts, Crafts, and Design)
locations[3].source.host_organization	https://openalex.org/I218177685
locations[3].source.host_organization_name	University College of Arts Crafts and Design
locations[3].source.host_organization_lineage	https://openalex.org/I218177685
locations[3].license	other-oa
locations[3].pdf_url
locations[3].version	submittedVersion
locations[3].raw_type	text
locations[3].license_id	https://openalex.org/licenses/other-oa
locations[3].is_accepted	False
locations[3].is_published	False
locations[3].raw_source_name
locations[3].landing_page_url	http://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-214614
locations[4].id	pmh:oai:doaj.org/article:0dc8318509ba40b4a7a4978a68d342a6
locations[4].is_oa	False
locations[4].source.id	https://openalex.org/S4306401280
locations[4].source.issn
locations[4].source.type	repository
locations[4].source.is_oa	False
locations[4].source.issn_l
locations[4].source.is_core	False
locations[4].source.is_in_doaj	False
locations[4].source.display_name	DOAJ (DOAJ: Directory of Open Access Journals)
locations[4].source.host_organization
locations[4].source.host_organization_name
locations[4].source.host_organization_lineage
locations[4].license
locations[4].pdf_url
locations[4].version	submittedVersion
locations[4].raw_type	article
locations[4].license_id
locations[4].is_accepted	False
locations[4].is_published	False
locations[4].raw_source_name	Nature Communications, Vol 14, Iss 1, Pp 1-18 (2023)
locations[4].landing_page_url	https://doaj.org/article/0dc8318509ba40b4a7a4978a68d342a6
locations[5].id	pmh:oai:DiVA.org:uu-486758
locations[5].is_oa	True
locations[5].source.id	https://openalex.org/S4306400013
locations[5].source.issn
locations[5].source.type	repository
locations[5].source.is_oa	False
locations[5].source.issn_l
locations[5].source.is_core	False
locations[5].source.is_in_doaj	False
locations[5].source.display_name	Publications (Konstfack University of Arts, Crafts, and Design)
locations[5].source.host_organization	https://openalex.org/I218177685
locations[5].source.host_organization_name	University College of Arts Crafts and Design
locations[5].source.host_organization_lineage	https://openalex.org/I218177685
locations[5].license	other-oa
locations[5].pdf_url
locations[5].version	submittedVersion
locations[5].raw_type	text
locations[5].license_id	https://openalex.org/licenses/other-oa
locations[5].is_accepted	False
locations[5].is_published	False
locations[5].raw_source_name
locations[5].landing_page_url	http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-486758
indexed_in	crossref, doaj, pubmed
authorships[0].author.id	https://openalex.org/A5003942868
authorships[0].author.orcid	https://orcid.org/0000-0002-6840-2319
authorships[0].author.display_name	Filip Mihalič
authorships[0].countries	SE
authorships[0].affiliations[0].institution_ids	https://openalex.org/I123387679
authorships[0].affiliations[0].raw_affiliation_string	Department of Medical Biochemistry and Microbiology, Uppsala University, Box 582, Husargatan 3, 751 23, Uppsala, Sweden
authorships[0].institutions[0].id	https://openalex.org/I123387679
authorships[0].institutions[0].ror	https://ror.org/048a87296
authorships[0].institutions[0].type	education
authorships[0].institutions[0].lineage	https://openalex.org/I123387679
authorships[0].institutions[0].country_code	SE
authorships[0].institutions[0].display_name	Uppsala University
authorships[0].author_position	first
authorships[0].raw_author_name	Filip Mihalič
authorships[0].is_corresponding	False
authorships[0].raw_affiliation_strings	Department of Medical Biochemistry and Microbiology, Uppsala University, Box 582, Husargatan 3, 751 23, Uppsala, Sweden
authorships[1].author.id	https://openalex.org/A5039083785
authorships[1].author.orcid	https://orcid.org/0000-0002-5166-3598
authorships[1].author.display_name	Caroline Benz
authorships[1].countries	SE
authorships[1].affiliations[0].institution_ids	https://openalex.org/I123387679
authorships[1].affiliations[0].raw_affiliation_string	Department of Chemistry - BMC, Uppsala University, Box 576, Husargatan 3, 751 23, Uppsala, Sweden
authorships[1].institutions[0].id	https://openalex.org/I123387679
authorships[1].institutions[0].ror	https://ror.org/048a87296
authorships[1].institutions[0].type	education
authorships[1].institutions[0].lineage	https://openalex.org/I123387679
authorships[1].institutions[0].country_code	SE
authorships[1].institutions[0].display_name	Uppsala University
authorships[1].author_position	middle
authorships[1].raw_author_name	Caroline Benz
authorships[1].is_corresponding	False
authorships[1].raw_affiliation_strings	Department of Chemistry - BMC, Uppsala University, Box 576, Husargatan 3, 751 23, Uppsala, Sweden
authorships[2].author.id	https://openalex.org/A5042276205
authorships[2].author.orcid	https://orcid.org/0000-0002-4086-6373
authorships[2].author.display_name	Eszter Kassa
authorships[2].countries	SE
authorships[2].affiliations[0].institution_ids	https://openalex.org/I123387679
authorships[2].affiliations[0].raw_affiliation_string	Department of Chemistry - BMC, Uppsala University, Box 576, Husargatan 3, 751 23, Uppsala, Sweden
authorships[2].institutions[0].id	https://openalex.org/I123387679
authorships[2].institutions[0].ror	https://ror.org/048a87296
authorships[2].institutions[0].type	education
authorships[2].institutions[0].lineage	https://openalex.org/I123387679
authorships[2].institutions[0].country_code	SE
authorships[2].institutions[0].display_name	Uppsala University
authorships[2].author_position	middle
authorships[2].raw_author_name	Eszter Kassa
authorships[2].is_corresponding	False
authorships[2].raw_affiliation_strings	Department of Chemistry - BMC, Uppsala University, Box 576, Husargatan 3, 751 23, Uppsala, Sweden
authorships[3].author.id	https://openalex.org/A5064721733
authorships[3].author.orcid	https://orcid.org/0000-0002-6103-8286
authorships[3].author.display_name	Richard Lindqvist
authorships[3].countries	SE
authorships[3].affiliations[0].institution_ids	https://openalex.org/I90267481
authorships[3].affiliations[0].raw_affiliation_string	Department of Clinical Microbiology, Umeå University, 90185, Umeå, Sweden
authorships[3].institutions[0].id	https://openalex.org/I90267481
authorships[3].institutions[0].ror	https://ror.org/05kb8h459
authorships[3].institutions[0].type	education
authorships[3].institutions[0].lineage	https://openalex.org/I90267481
authorships[3].institutions[0].country_code	SE
authorships[3].institutions[0].display_name	Umeå University
authorships[3].author_position	middle
authorships[3].raw_author_name	Richard Lindqvist
authorships[3].is_corresponding	False
authorships[3].raw_affiliation_strings	Department of Clinical Microbiology, Umeå University, 90185, Umeå, Sweden
authorships[4].author.id	https://openalex.org/A5038145734
authorships[4].author.orcid	https://orcid.org/0000-0003-1283-9770
authorships[4].author.display_name	Leandro Simonetti
authorships[4].countries	SE
authorships[4].affiliations[0].institution_ids	https://openalex.org/I123387679
authorships[4].affiliations[0].raw_affiliation_string	Department of Chemistry - BMC, Uppsala University, Box 576, Husargatan 3, 751 23, Uppsala, Sweden
authorships[4].institutions[0].id	https://openalex.org/I123387679
authorships[4].institutions[0].ror	https://ror.org/048a87296
authorships[4].institutions[0].type	education
authorships[4].institutions[0].lineage	https://openalex.org/I123387679
authorships[4].institutions[0].country_code	SE
authorships[4].institutions[0].display_name	Uppsala University
authorships[4].author_position	middle
authorships[4].raw_author_name	Leandro Simonetti
authorships[4].is_corresponding	False
authorships[4].raw_affiliation_strings	Department of Chemistry - BMC, Uppsala University, Box 576, Husargatan 3, 751 23, Uppsala, Sweden
authorships[5].author.id	https://openalex.org/A5032600436
authorships[5].author.orcid	https://orcid.org/0000-0003-1344-3962
authorships[5].author.display_name	Raviteja Inturi
authorships[5].countries	SE
authorships[5].affiliations[0].institution_ids	https://openalex.org/I123387679
authorships[5].affiliations[0].raw_affiliation_string	Department of Medical Biochemistry and Microbiology, Uppsala University, Box 582, Husargatan 3, 751 23, Uppsala, Sweden
authorships[5].institutions[0].id	https://openalex.org/I123387679
authorships[5].institutions[0].ror	https://ror.org/048a87296
authorships[5].institutions[0].type	education
authorships[5].institutions[0].lineage	https://openalex.org/I123387679
authorships[5].institutions[0].country_code	SE
authorships[5].institutions[0].display_name	Uppsala University
authorships[5].author_position	middle
authorships[5].raw_author_name	Raviteja Inturi
authorships[5].is_corresponding	False
authorships[5].raw_affiliation_strings	Department of Medical Biochemistry and Microbiology, Uppsala University, Box 582, Husargatan 3, 751 23, Uppsala, Sweden
authorships[6].author.id	https://openalex.org/A5028263755
authorships[6].author.orcid
authorships[6].author.display_name	Hanna Aronsson
authorships[6].countries	SE
authorships[6].affiliations[0].institution_ids	https://openalex.org/I123387679
authorships[6].affiliations[0].raw_affiliation_string	Department of Medical Biochemistry and Microbiology, Uppsala University, Box 582, Husargatan 3, 751 23, Uppsala, Sweden
authorships[6].institutions[0].id	https://openalex.org/I123387679
authorships[6].institutions[0].ror	https://ror.org/048a87296
authorships[6].institutions[0].type	education
authorships[6].institutions[0].lineage	https://openalex.org/I123387679
authorships[6].institutions[0].country_code	SE
authorships[6].institutions[0].display_name	Uppsala University
authorships[6].author_position	middle
authorships[6].raw_author_name	Hanna Aronsson
authorships[6].is_corresponding	False
authorships[6].raw_affiliation_strings	Department of Medical Biochemistry and Microbiology, Uppsala University, Box 582, Husargatan 3, 751 23, Uppsala, Sweden
authorships[7].author.id	https://openalex.org/A5048163373
authorships[7].author.orcid	https://orcid.org/0000-0001-9620-1314
authorships[7].author.display_name	Eva Andersson
authorships[7].countries	SE
authorships[7].affiliations[0].institution_ids	https://openalex.org/I123387679
authorships[7].affiliations[0].raw_affiliation_string	Department of Medical Biochemistry and Microbiology, Uppsala University, Box 582, Husargatan 3, 751 23, Uppsala, Sweden
authorships[7].institutions[0].id	https://openalex.org/I123387679
authorships[7].institutions[0].ror	https://ror.org/048a87296
authorships[7].institutions[0].type	education
authorships[7].institutions[0].lineage	https://openalex.org/I123387679
authorships[7].institutions[0].country_code	SE
authorships[7].institutions[0].display_name	Uppsala University
authorships[7].author_position	middle
authorships[7].raw_author_name	Eva Andersson
authorships[7].is_corresponding	False
authorships[7].raw_affiliation_strings	Department of Medical Biochemistry and Microbiology, Uppsala University, Box 582, Husargatan 3, 751 23, Uppsala, Sweden
authorships[8].author.id	https://openalex.org/A5001315246
authorships[8].author.orcid	https://orcid.org/0000-0003-4154-2378
authorships[8].author.display_name	N. Celestine
authorships[8].countries	SE
authorships[8].affiliations[0].institution_ids	https://openalex.org/I123387679
authorships[8].affiliations[0].raw_affiliation_string	Department of Medical Biochemistry and Microbiology, Uppsala University, Box 582, Husargatan 3, 751 23, Uppsala, Sweden
authorships[8].institutions[0].id	https://openalex.org/I123387679
authorships[8].institutions[0].ror	https://ror.org/048a87296
authorships[8].institutions[0].type	education
authorships[8].institutions[0].lineage	https://openalex.org/I123387679
authorships[8].institutions[0].country_code	SE
authorships[8].institutions[0].display_name	Uppsala University
authorships[8].author_position	middle
authorships[8].raw_author_name	Celestine N. Chi
authorships[8].is_corresponding	False
authorships[8].raw_affiliation_strings	Department of Medical Biochemistry and Microbiology, Uppsala University, Box 582, Husargatan 3, 751 23, Uppsala, Sweden
authorships[9].author.id	https://openalex.org/A5088993735
authorships[9].author.orcid	https://orcid.org/0000-0001-6988-4850
authorships[9].author.display_name	Norman E. Davey
authorships[9].countries	GB
authorships[9].affiliations[0].institution_ids	https://openalex.org/I142947616
authorships[9].affiliations[0].raw_affiliation_string	Division of Cancer Biology, The Institute of Cancer Research, 237 Fulham Road, London, SW3 6JB, UK
authorships[9].institutions[0].id	https://openalex.org/I142947616
authorships[9].institutions[0].ror	https://ror.org/043jzw605
authorships[9].institutions[0].type	education
authorships[9].institutions[0].lineage	https://openalex.org/I124357947, https://openalex.org/I142947616
authorships[9].institutions[0].country_code	GB
authorships[9].institutions[0].display_name	Institute of Cancer Research
authorships[9].author_position	middle
authorships[9].raw_author_name	Norman E. Davey
authorships[9].is_corresponding	False
authorships[9].raw_affiliation_strings	Division of Cancer Biology, The Institute of Cancer Research, 237 Fulham Road, London, SW3 6JB, UK
authorships[10].author.id	https://openalex.org/A5029709232
authorships[10].author.orcid	https://orcid.org/0000-0001-6553-0940
authorships[10].author.display_name	Anna K. Överby
authorships[10].countries	SE
authorships[10].affiliations[0].institution_ids	https://openalex.org/I90267481
authorships[10].affiliations[0].raw_affiliation_string	Department of Clinical Microbiology, Umeå University, 90185, Umeå, Sweden
authorships[10].institutions[0].id	https://openalex.org/I90267481
authorships[10].institutions[0].ror	https://ror.org/05kb8h459
authorships[10].institutions[0].type	education
authorships[10].institutions[0].lineage	https://openalex.org/I90267481
authorships[10].institutions[0].country_code	SE
authorships[10].institutions[0].display_name	Umeå University
authorships[10].author_position	middle
authorships[10].raw_author_name	Anna K. Överby
authorships[10].is_corresponding	False
authorships[10].raw_affiliation_strings	Department of Clinical Microbiology, Umeå University, 90185, Umeå, Sweden
authorships[11].author.id	https://openalex.org/A5066198767
authorships[11].author.orcid	https://orcid.org/0000-0003-1516-7228
authorships[11].author.display_name	Per Jemth
authorships[11].countries	SE
authorships[11].affiliations[0].institution_ids	https://openalex.org/I123387679
authorships[11].affiliations[0].raw_affiliation_string	Department of Medical Biochemistry and Microbiology, Uppsala University, Box 582, Husargatan 3, 751 23, Uppsala, Sweden
authorships[11].institutions[0].id	https://openalex.org/I123387679
authorships[11].institutions[0].ror	https://ror.org/048a87296
authorships[11].institutions[0].type	education
authorships[11].institutions[0].lineage	https://openalex.org/I123387679
authorships[11].institutions[0].country_code	SE
authorships[11].institutions[0].display_name	Uppsala University
authorships[11].author_position	middle
authorships[11].raw_author_name	Per Jemth
authorships[11].is_corresponding	False
authorships[11].raw_affiliation_strings	Department of Medical Biochemistry and Microbiology, Uppsala University, Box 582, Husargatan 3, 751 23, Uppsala, Sweden
authorships[12].author.id	https://openalex.org/A5067140972
authorships[12].author.orcid	https://orcid.org/0000-0002-7081-3846
authorships[12].author.display_name	Ylva Ivarsson
authorships[12].countries	SE
authorships[12].affiliations[0].institution_ids	https://openalex.org/I123387679
authorships[12].affiliations[0].raw_affiliation_string	Department of Chemistry - BMC, Uppsala University, Box 576, Husargatan 3, 751 23, Uppsala, Sweden
authorships[12].institutions[0].id	https://openalex.org/I123387679
authorships[12].institutions[0].ror	https://ror.org/048a87296
authorships[12].institutions[0].type	education
authorships[12].institutions[0].lineage	https://openalex.org/I123387679
authorships[12].institutions[0].country_code	SE
authorships[12].institutions[0].display_name	Uppsala University
authorships[12].author_position	last
authorships[12].raw_author_name	Ylva Ivarsson
authorships[12].is_corresponding	False
authorships[12].raw_affiliation_strings	Department of Chemistry - BMC, Uppsala University, Box 576, Husargatan 3, 751 23, Uppsala, Sweden
has_content.pdf	True
has_content.grobid_xml	True
is_paratext	False
open_access.is_oa	True
open_access.oa_url	https://www.nature.com/articles/s41467-023-41312-8.pdf
open_access.oa_status	gold
open_access.any_repository_has_fulltext	False
created_date	2025-10-10T00:00:00
display_name	Identification of motif-based interactions between SARS-CoV-2 protein domains and human peptide ligands pinpoint antiviral targets
has_fulltext	True
is_retracted	False
updated_date	2025-11-23T05:10:03.516525
primary_topic.id	https://openalex.org/T10118
primary_topic.field.id	https://openalex.org/fields/27
primary_topic.field.display_name	Medicine
primary_topic.score	0.9994999766349792
primary_topic.domain.id	https://openalex.org/domains/4
primary_topic.domain.display_name	Health Sciences
primary_topic.subfield.id	https://openalex.org/subfields/2725
primary_topic.subfield.display_name	Infectious Diseases
primary_topic.display_name	SARS-CoV-2 and COVID-19 Research
related_works	https://openalex.org/W4206669628, https://openalex.org/W4224279380, https://openalex.org/W4205317059, https://openalex.org/W3176864053, https://openalex.org/W4206651655, https://openalex.org/W4206548596, https://openalex.org/W4292098121, https://openalex.org/W4210433452, https://openalex.org/W3036314732, https://openalex.org/W3084808338
cited_by_count	21
counts_by_year[0].year	2025
counts_by_year[0].cited_by_count	6
counts_by_year[1].year	2024
counts_by_year[1].cited_by_count	13
counts_by_year[2].year	2023
counts_by_year[2].cited_by_count	2
locations_count	6
best_oa_location.id	doi:10.1038/s41467-023-41312-8
best_oa_location.is_oa	True
best_oa_location.source.id	https://openalex.org/S64187185
best_oa_location.source.issn	2041-1723
best_oa_location.source.type	journal
best_oa_location.source.is_oa	True
best_oa_location.source.issn_l	2041-1723
best_oa_location.source.is_core	True
best_oa_location.source.is_in_doaj	True
best_oa_location.source.display_name	Nature Communications
best_oa_location.source.host_organization	https://openalex.org/P4310319908
best_oa_location.source.host_organization_name	Nature Portfolio
best_oa_location.source.host_organization_lineage	https://openalex.org/P4310319908
best_oa_location.license	cc-by
best_oa_location.pdf_url	https://www.nature.com/articles/s41467-023-41312-8.pdf
best_oa_location.version	publishedVersion
best_oa_location.raw_type	journal-article
best_oa_location.license_id	https://openalex.org/licenses/cc-by
best_oa_location.is_accepted	True
best_oa_location.is_published	True
best_oa_location.raw_source_name	Nature Communications
best_oa_location.landing_page_url	https://doi.org/10.1038/s41467-023-41312-8
primary_location.id	doi:10.1038/s41467-023-41312-8
primary_location.is_oa	True
primary_location.source.id	https://openalex.org/S64187185
primary_location.source.issn	2041-1723
primary_location.source.type	journal
primary_location.source.is_oa	True
primary_location.source.issn_l	2041-1723
primary_location.source.is_core	True
primary_location.source.is_in_doaj	True
primary_location.source.display_name	Nature Communications
primary_location.source.host_organization	https://openalex.org/P4310319908
primary_location.source.host_organization_name	Nature Portfolio
primary_location.source.host_organization_lineage	https://openalex.org/P4310319908
primary_location.license	cc-by
primary_location.pdf_url	https://www.nature.com/articles/s41467-023-41312-8.pdf
primary_location.version	publishedVersion
primary_location.raw_type	journal-article
primary_location.license_id	https://openalex.org/licenses/cc-by
primary_location.is_accepted	True
primary_location.is_published	True
primary_location.raw_source_name	Nature Communications
primary_location.landing_page_url	https://doi.org/10.1038/s41467-023-41312-8
publication_date	2023-09-13
publication_year	2023
referenced_works	https://openalex.org/W3162776052, https://openalex.org/W3192713004, https://openalex.org/W3189646261, https://openalex.org/W4281787267, https://openalex.org/W2970491619, https://openalex.org/W3022285953, https://openalex.org/W3152549658, https://openalex.org/W3212975895, https://openalex.org/W4283156244, https://openalex.org/W3209420441, https://openalex.org/W6803490545, https://openalex.org/W4311203424, https://openalex.org/W2079635715, https://openalex.org/W4205673328, https://openalex.org/W2534007261, https://openalex.org/W3026779910, https://openalex.org/W3180232191, https://openalex.org/W3025955122, https://openalex.org/W3043427328, https://openalex.org/W4287838589, https://openalex.org/W3111460775, https://openalex.org/W3107892561, https://openalex.org/W6786946163, https://openalex.org/W4280506645, https://openalex.org/W2769072089, https://openalex.org/W3101481283, https://openalex.org/W3027231799, https://openalex.org/W3015429854, https://openalex.org/W6775678164, https://openalex.org/W2013669585, https://openalex.org/W4292360241, https://openalex.org/W3138846926, https://openalex.org/W3188488999, https://openalex.org/W3007355351, https://openalex.org/W3017291089, https://openalex.org/W4283070623, https://openalex.org/W3114464572, https://openalex.org/W4362638757, https://openalex.org/W3198339740, https://openalex.org/W4313703703, https://openalex.org/W4214590503, https://openalex.org/W3034131048, https://openalex.org/W4210438208, https://openalex.org/W4205989657, https://openalex.org/W2106477324, https://openalex.org/W4225934572, https://openalex.org/W3178283518, https://openalex.org/W4304080474, https://openalex.org/W3208113816, https://openalex.org/W3093213262, https://openalex.org/W3013280997, https://openalex.org/W3033917173, https://openalex.org/W3037830326, https://openalex.org/W3047439400, https://openalex.org/W2156362611, https://openalex.org/W2010912571, https://openalex.org/W3018003396, https://openalex.org/W3194955130, https://openalex.org/W4281790889, https://openalex.org/W3041591964, https://openalex.org/W3092371368, https://openalex.org/W3191835407, https://openalex.org/W3095507416, https://openalex.org/W4281722097, https://openalex.org/W4282934683, https://openalex.org/W4316672847, https://openalex.org/W4312018778, https://openalex.org/W4377293029, https://openalex.org/W3210697779, https://openalex.org/W3190773265, https://openalex.org/W7074093721, https://openalex.org/W3104955345, https://openalex.org/W2092033589, https://openalex.org/W2126511940, https://openalex.org/W3138508140, https://openalex.org/W1966856638, https://openalex.org/W3200222659, https://openalex.org/W4220653757, https://openalex.org/W3043868614, https://openalex.org/W3119325034, https://openalex.org/W2258422636, https://openalex.org/W2442161751, https://openalex.org/W3091122177, https://openalex.org/W3045327938, https://openalex.org/W3163819505, https://openalex.org/W2898221567, https://openalex.org/W2051534962, https://openalex.org/W1828394588, https://openalex.org/W2623728418, https://openalex.org/W3108269660, https://openalex.org/W3154372950, https://openalex.org/W3114675079, https://openalex.org/W3123421077, https://openalex.org/W3190429236, https://openalex.org/W3015431764, https://openalex.org/W3022734398, https://openalex.org/W3133499696, https://openalex.org/W3015608194, https://openalex.org/W3148554359, https://openalex.org/W4211218744, https://openalex.org/W3046445222, https://openalex.org/W3024602798, https://openalex.org/W3165032628, https://openalex.org/W3036529319, https://openalex.org/W4297259300, https://openalex.org/W3120407713, https://openalex.org/W2593927750, https://openalex.org/W2085510519, https://openalex.org/W4205414863, https://openalex.org/W3044121318, https://openalex.org/W2159675211, https://openalex.org/W2917858269, https://openalex.org/W6759669832, https://openalex.org/W2168637722, https://openalex.org/W1995683190, https://openalex.org/W2043764521, https://openalex.org/W2095867585, https://openalex.org/W6674754706, https://openalex.org/W4367059220, https://openalex.org/W2095453782, https://openalex.org/W3087108488, https://openalex.org/W2055382555, https://openalex.org/W2038699599, https://openalex.org/W2070284857, https://openalex.org/W1971317954, https://openalex.org/W2040506774, https://openalex.org/W1977925707, https://openalex.org/W3177828909, https://openalex.org/W3202105508, https://openalex.org/W3178428800
referenced_works_count	130
abstract_inverted_index
cited_by_percentile_year.max	99
cited_by_percentile_year.min	94
countries_distinct_count	2
institutions_distinct_count	13
sustainable_development_goals[0].id	https://metadata.un.org/sdg/12
sustainable_development_goals[0].score	0.5600000023841858
sustainable_development_goals[0].display_name	Responsible consumption and production
citation_normalized_percentile.value	0.96018772
citation_normalized_percentile.is_in_top_1_percent	False
citation_normalized_percentile.is_in_top_10_percent	True