Identification of Pathogenic Variations in Seafood Vibrio parahaemolyticus Isolates by Comparing Genome Sequences Article Swipe
Sunyoung Park
,
Heeyoung Lee
,
Sejeong Kim
,
Yukyung Choi
,
Hyemin Oh
,
Yujin Kim
,
Yewon Lee
,
Yeongeun Seo
,
Joohyun Kang
,
Eunyoung Park
,
Yohan Yoon
,
Jimyeong Ha
·
YOU?
·
· 2021
· Open Access
·
· DOI: https://doi.org/10.4315/jfp-20-437
YOU?
·
· 2021
· Open Access
·
· DOI: https://doi.org/10.4315/jfp-20-437
An investigation of the pathogenic characteristics of isolates of Vibrio parahaemolyticus was conducted by identifying the pathogenic tdh gene and then performing adherence and cytotoxicity assays. Genome sequences of the seafood isolates were analyzed using the Illumina HiSeq 2500 platform. The isolated strains were then mapped by comparing the genomes to the reference genome, and variations in the nucleotide sequences and amino acids were identified with the CLC Genomics Workbench program. The tdh gene was identified in four isolates of V. parahaemolyticus, of which three-SMFM201809-CPC7-3, SMFM201809-CF8-2, and SMFM201809-CF8-3-showed high cytotoxicity and differences in cell adhesion. These isolates were selected to identify virulence factors and genomic variations. All three isolates had the same virulence factors, such as adherence, secretion system, and toxin. In addition, amino acid variants were identified in the regions of type IV pilus, T3SS1 and T3SS1 secreted effectors, and thermolabile hemolysin. These results indicate that variations in amino acids found in regions related to adherence and cytotoxicity result in differences in adhesion efficiency and cytotoxicity; therefore, the isolates with these variations may cause more serious foodborne illness compared with other strains.
Related Topics
Concepts
Vibrio parahaemolyticus
Biology
Virulence
Genome
Microbiology
Hemolysin
Gene
Cytotoxicity
Vibrio Infections
Genetics
Vibrio
Bacteria
In vitro
Metadata
- Type
- article
- Language
- en
- Landing Page
- https://doi.org/10.4315/jfp-20-437
- OA Status
- hybrid
- Cited By
- 1
- References
- 20
- Related Works
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- OpenAlex ID
- https://openalex.org/W3132096615
All OpenAlex metadata
Raw OpenAlex JSON
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https://openalex.org/W3132096615Canonical identifier for this work in OpenAlex
- DOI
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https://doi.org/10.4315/jfp-20-437Digital Object Identifier
- Title
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Identification of Pathogenic Variations in Seafood Vibrio parahaemolyticus Isolates by Comparing Genome SequencesWork title
- Type
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articleOpenAlex work type
- Language
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enPrimary language
- Publication year
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2021Year of publication
- Publication date
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2021-02-26Full publication date if available
- Authors
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Sunyoung Park, Heeyoung Lee, Sejeong Kim, Yukyung Choi, Hyemin Oh, Yujin Kim, Yewon Lee, Yeongeun Seo, Joohyun Kang, Eunyoung Park, Yohan Yoon, Jimyeong HaList of authors in order
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https://doi.org/10.4315/jfp-20-437Publisher landing page
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YesWhether a free full text is available
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hybridOpen access status per OpenAlex
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https://doi.org/10.4315/jfp-20-437Direct OA link when available
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Vibrio parahaemolyticus, Biology, Virulence, Genome, Microbiology, Hemolysin, Gene, Cytotoxicity, Vibrio Infections, Genetics, Vibrio, Bacteria, In vitroTop concepts (fields/topics) attached by OpenAlex
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1Total citation count in OpenAlex
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