Identification of Stem Rust Resistance Genes in Released Wheat Varieties by Linked SSR Markers and Phenotypic Screening Article Swipe
Sisay Alemu
,
Obssi Dessalegn Hora
,
Fedesa Kebede Terfasa
,
Melesech Teshale
,
Belainesh Hailu
,
Kefyalew Negisho Bayissa
,
Biruktait Berhanu
,
Ashenafi Gemechu Degete
,
Netsanet Bacha
,
Habtemariam Zegeye
,
Tsegaab Tesfaye
,
Urgesa Tsega Tulu
,
Mulatu Gidi
·
YOU?
·
· 2023
· Open Access
·
· DOI: https://doi.org/10.11648/j.ijgg.20231102.12
YOU?
·
· 2023
· Open Access
·
· DOI: https://doi.org/10.11648/j.ijgg.20231102.12
Wheat suffers significant yield losses due to stem rust disease caused by Puccinia graminis Pers. f. sp. tritici Eriks and Henn. Molecular level assessment of existing Sr genes in improved and advanced wheat materials combined with phenotypic screening lays down the basis for effective varietal development against this production constraint. Therefore, this study was carried out: to detect stem rust resistance genes present in Ethiopian bread wheat and durum wheat varieties using molecular markers; and to determine their effectiveness for the virulent Ethiopian stem rust races including Ug99. Screening of 49 wheat varieties with 11 SSR markers linked to 11 Stem rust resistance genes resulted in the detection of 5 Stem rust resistance genes (Sr22, Sr25, Sr24, Sr77 and SrTA10187) in a subset of 12 varieties. The detected number of genes ranged between 1 and 2 per genotype. Despite amplifying the expected fragment, the markers have also resulted in several off-target amplifications suggesting the need to develop other relatively stable markers specific to the target genes. Field resistance screening at Debre Zeit Research Center resulted in 20 varieties showing good resistance to stem rust of which 2 are durum wheat cultivars and the rest 18 are bread wheat varieties. Recent data in 2022, however, showed only 5 out of the 20 had a resistant reaction while the other even became susceptible. For instance, most of the mega bread wheat cultivars like Ogolcho also were defeated due to the newly emerging race TTKTT. Among the genes detected by molecular markers, only SrTA10187 seems to be effective against the rust population in the field. Seedling resistances screening gave a range of proportion of Resistant (R) to Susceptible (S) variety varying from 12:36 for TTKTT; 40:8 for TKTTF; 39:9 for TTKSK and 44:4 for TTTTF. Eight varieties (Sulla, Galil, Huluka, Kingbird, Millenium, Obsa, Tate and Ilani) exhibited resistant reaction consistently across the four pathotypes. Nine varieties (Honqollo, Millenium, Kulkulu, Shorima, Hogana, Meraro, Ilani and Galil) identified as resistant at both seedling and Adult plant stage. The genes, Sr22 in variety Oda and Sr25 in variety Dinknesh appeared to be effective for TTKTT, TKTTF, TTKSK and TKTTF, TTKSK, TTTTF, respectively. The detected Stem rust resistance genes in the present study which are effective against the pathotyeps combined with the resistant varieties at seedling and adult plant stage can support the wheat breeding program towards improving the crop.
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- Type
- article
- Language
- en
- Landing Page
- https://doi.org/10.11648/j.ijgg.20231102.12
- https://article.sciencepublishinggroup.com/pdf/10.11648.j.ijgg.20231102.12.pdf
- OA Status
- diamond
- Cited By
- 1
- References
- 13
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W4381143813
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- OpenAlex ID
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https://openalex.org/W4381143813Canonical identifier for this work in OpenAlex
- DOI
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https://doi.org/10.11648/j.ijgg.20231102.12Digital Object Identifier
- Title
-
Identification of Stem Rust Resistance Genes in Released Wheat Varieties by Linked SSR Markers and Phenotypic ScreeningWork title
- Type
-
articleOpenAlex work type
- Language
-
enPrimary language
- Publication year
-
2023Year of publication
- Publication date
-
2023-05-18Full publication date if available
- Authors
-
Sisay Alemu, Obssi Dessalegn Hora, Fedesa Kebede Terfasa, Melesech Teshale, Belainesh Hailu, Kefyalew Negisho Bayissa, Biruktait Berhanu, Ashenafi Gemechu Degete, Netsanet Bacha, Habtemariam Zegeye, Tsegaab Tesfaye, Urgesa Tsega Tulu, Mulatu GidiList of authors in order
- Landing page
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https://doi.org/10.11648/j.ijgg.20231102.12Publisher landing page
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https://article.sciencepublishinggroup.com/pdf/10.11648.j.ijgg.20231102.12.pdfDirect link to full text PDF
- Open access
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YesWhether a free full text is available
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diamondOpen access status per OpenAlex
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https://article.sciencepublishinggroup.com/pdf/10.11648.j.ijgg.20231102.12.pdfDirect OA link when available
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Stem rust, Biology, Puccinia, Cultivar, Gene, Rust (programming language), Molecular marker, Genotype, Phenotype, Marker-assisted selection, Main stem, Horticulture, Genetics, Computer science, Mildew, Programming languageTop concepts (fields/topics) attached by OpenAlex
- Cited by
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1Total citation count in OpenAlex
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2024: 1Per-year citation counts (last 5 years)
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13Number of works referenced by this work
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10Other works algorithmically related by OpenAlex
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