In situ cell-type-specific cell-surface proteomic profiling in mice Article Swipe
S. Andrew Shuster
,
Jun Li
,
Uree Chon
,
Miley C. Sinantha-Hu
,
David J. Luginbuhl
,
Namrata D. Udeshi
,
Dominique K. Carey
,
Yukari H. Takeo
,
Qijing Xie
,
Chuanyun Xu
,
D.R. Mani
,
Shuo Han
,
Alice Y. Ting
,
Steven A. Carr
,
Liqun Luo
·
YOU?
·
· 2022
· Open Access
·
· DOI: https://doi.org/10.1016/j.neuron.2022.09.025
YOU?
·
· 2022
· Open Access
·
· DOI: https://doi.org/10.1016/j.neuron.2022.09.025
Cell-surface proteins (CSPs) mediate intercellular communication throughout the lives of multicellular organisms. However, there are no generalizable methods for quantitative CSP profiling in specific cell types in vertebrate tissues. Here, we present in situ cell-surface proteome extraction by extracellular labeling (iPEEL), a proximity labeling method in mice that enables spatiotemporally precise labeling of cell-surface proteomes in a cell-type-specific environment in native tissues for discovery proteomics. Applying iPEEL to developing and mature cerebellar Purkinje cells revealed differential enrichment in CSPs with post-translational protein processing and synaptic functions in the developing and mature cell-surface proteomes, respectively. A proteome-instructed in vivo loss-of-function screen identified a critical, multifaceted role for Armh4 in Purkinje cell dendrite morphogenesis. Armh4 overexpression also disrupts dendrite morphogenesis; this effect requires its conserved cytoplasmic domain and is augmented by disrupting its endocytosis. Our results highlight the utility of CSP profiling in native mammalian tissues for identifying regulators of cell-surface signaling.
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- Type
- article
- Language
- en
- Landing Page
- https://doi.org/10.1016/j.neuron.2022.09.025
- OA Status
- hybrid
- Cited By
- 54
- References
- 101
- Related Works
- 10
- OpenAlex ID
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https://openalex.org/W4304014316Canonical identifier for this work in OpenAlex
- DOI
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https://doi.org/10.1016/j.neuron.2022.09.025Digital Object Identifier
- Title
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In situ cell-type-specific cell-surface proteomic profiling in miceWork title
- Type
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articleOpenAlex work type
- Language
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enPrimary language
- Publication year
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2022Year of publication
- Publication date
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2022-10-10Full publication date if available
- Authors
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S. Andrew Shuster, Jun Li, Uree Chon, Miley C. Sinantha-Hu, David J. Luginbuhl, Namrata D. Udeshi, Dominique K. Carey, Yukari H. Takeo, Qijing Xie, Chuanyun Xu, D.R. Mani, Shuo Han, Alice Y. Ting, Steven A. Carr, Liqun LuoList of authors in order
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https://doi.org/10.1016/j.neuron.2022.09.025Publisher landing page
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YesWhether a free full text is available
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hybridOpen access status per OpenAlex
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https://doi.org/10.1016/j.neuron.2022.09.025Direct OA link when available
- Concepts
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In situ, Cell, Profiling (computer programming), Cell type, Biology, Computational biology, Cell biology, Chemistry, Genetics, Computer science, Operating system, Organic chemistryTop concepts (fields/topics) attached by OpenAlex
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54Total citation count in OpenAlex
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2025: 21, 2024: 17, 2023: 15, 2022: 1Per-year citation counts (last 5 years)
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101Number of works referenced by this work
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10Other works algorithmically related by OpenAlex
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| corresponding_author_ids | https://openalex.org/A5019791073 |
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| institutions_distinct_count | 15 |
| corresponding_institution_ids | https://openalex.org/I1344073410, https://openalex.org/I97018004 |
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