Inference and Validation of The Structure of Lotka-Volterra Models Article Swipe
Eberhard O. Voit
,
Jacob D. Davis
,
Daniel V. Olivença
·
YOU?
·
· 2021
· Open Access
·
· DOI: https://doi.org/10.21203/rs.3.rs-850869/v1
YOU?
·
· 2021
· Open Access
·
· DOI: https://doi.org/10.21203/rs.3.rs-850869/v1
For close to a century, Lotka-Volterra (LV) models have been used to investigate interactions among populations of different species. For a few species, these investigations are straightforward. However, with the arrival of large and complex microbiomes, unprecedently rich data have become available and await analysis. In particular, these data require us to ask which microbial populations of a mixed community affect other populations, whether these influences are activating or inhibiting and how the interactions change over time. Here we present two new inference strategies for interaction parameters that are based on a new algebraic LV inference (ALVI) method. One strategy uses different survivor profiles of communities grown under similar conditions, while the other pertains to time series data. In addition, we address the question of whether observation data are compliant with the LV structure or require a richer modeling format.
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Metadata
- Type
- preprint
- Language
- en
- Landing Page
- https://doi.org/10.21203/rs.3.rs-850869/v1
- https://www.researchsquare.com/article/rs-850869/v1.pdf?c=1631892041000
- OA Status
- green
- Cited By
- 2
- References
- 52
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W4230178108
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- OpenAlex ID
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https://openalex.org/W4230178108Canonical identifier for this work in OpenAlex
- DOI
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https://doi.org/10.21203/rs.3.rs-850869/v1Digital Object Identifier
- Title
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Inference and Validation of The Structure of Lotka-Volterra ModelsWork title
- Type
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preprintOpenAlex work type
- Language
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enPrimary language
- Publication year
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2021Year of publication
- Publication date
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2021-08-31Full publication date if available
- Authors
-
Eberhard O. Voit, Jacob D. Davis, Daniel V. OlivençaList of authors in order
- Landing page
-
https://doi.org/10.21203/rs.3.rs-850869/v1Publisher landing page
- PDF URL
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https://www.researchsquare.com/article/rs-850869/v1.pdf?c=1631892041000Direct link to full text PDF
- Open access
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YesWhether a free full text is available
- OA status
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greenOpen access status per OpenAlex
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https://www.researchsquare.com/article/rs-850869/v1.pdf?c=1631892041000Direct OA link when available
- Concepts
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Inference, Volterra equations, Algebraic structure, Computer science, Series (stratigraphy), Econometrics, Data science, Ecology, Machine learning, Artificial intelligence, Mathematics, Biology, Physics, Nonlinear system, Pure mathematics, Paleontology, Quantum mechanicsTop concepts (fields/topics) attached by OpenAlex
- Cited by
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2Total citation count in OpenAlex
- Citations by year (recent)
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2025: 1, 2022: 1Per-year citation counts (last 5 years)
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52Number of works referenced by this work
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-
10Other works algorithmically related by OpenAlex
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| corresponding_author_ids | https://openalex.org/A5063233199 |
| countries_distinct_count | 1 |
| institutions_distinct_count | 3 |
| corresponding_institution_ids | https://openalex.org/I130701444 |
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