Lateral root initiation requires the sequential induction of transcription factors LBD16 and PUCHI in Arabidopsis thaliana Article Swipe
Tatsuaki Goh
,
Koichi Toyokura
,
Nobutoshi Yamaguchi
,
Yoshie Okamoto
,
Takeo Uehara
,
Shutaro Kaneko
,
Yumiko Takebayashi
,
Hiroyuki Kasahara
,
Yoshifumi Ikeyama
,
Yoko Okushima
,
Keiji Nakajima
,
Tetsuro Mimura
,
Masao Tasaka
,
Hidehiro Fukaki
·
YOU?
·
· 2019
· Open Access
·
· DOI: https://doi.org/10.1111/nph.16065
YOU?
·
· 2019
· Open Access
·
· DOI: https://doi.org/10.1111/nph.16065
Summary Lateral root (LR) formation in Arabidopsis thaliana is initiated by asymmetric division of founder cells, followed by coordinated cell proliferation and differentiation for patterning new primordia. The sequential developmental processes of LR formation are triggered by a localized auxin response. LATERAL ORGAN BOUNDARIES‐DOMAIN 16 (LBD16), an auxin‐inducible transcription factor, is one of the key regulators linking auxin response in LR founder cells to LR initiation. We identified key genes for LR formation that are activated by LBD16 in an auxin‐dependent manner. LBD16 targets identified include the transcription factor gene PUCHI , which is required for LR primordium patterning. We demonstrate that LBD16 activity is required for the auxin‐inducible expression of PUCHI . We show that PUCHI expression is initiated after the first round of asymmetric cell division of LR founder cells and that premature induction of PUCHI during the preinitiation phase disrupts LR primordium formation. Our results indicate that LR initiation requires the sequential induction of transcription factors LBD16 and PUCHI.
Related Topics
Concepts
Primordium
Auxin
Biology
Lateral root
Transcription factor
Cell biology
Arabidopsis
Cell division
Arabidopsis thaliana
Transcription (linguistics)
Gene
Transcription factor II E
Genetics
Cell
Transcriptional regulation
Mutant
Philosophy
Linguistics
Metadata
- Type
- article
- Language
- en
- Landing Page
- https://doi.org/10.1111/nph.16065
- https://nph.onlinelibrary.wiley.com/doi/pdfdirect/10.1111/nph.16065
- OA Status
- bronze
- Cited By
- 90
- References
- 39
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W2958190278
All OpenAlex metadata
Raw OpenAlex JSON
- OpenAlex ID
-
https://openalex.org/W2958190278Canonical identifier for this work in OpenAlex
- DOI
-
https://doi.org/10.1111/nph.16065Digital Object Identifier
- Title
-
Lateral root initiation requires the sequential induction of transcription factors LBD16 and PUCHI in Arabidopsis thalianaWork title
- Type
-
articleOpenAlex work type
- Language
-
enPrimary language
- Publication year
-
2019Year of publication
- Publication date
-
2019-07-16Full publication date if available
- Authors
-
Tatsuaki Goh, Koichi Toyokura, Nobutoshi Yamaguchi, Yoshie Okamoto, Takeo Uehara, Shutaro Kaneko, Yumiko Takebayashi, Hiroyuki Kasahara, Yoshifumi Ikeyama, Yoko Okushima, Keiji Nakajima, Tetsuro Mimura, Masao Tasaka, Hidehiro FukakiList of authors in order
- Landing page
-
https://doi.org/10.1111/nph.16065Publisher landing page
- PDF URL
-
https://nph.onlinelibrary.wiley.com/doi/pdfdirect/10.1111/nph.16065Direct link to full text PDF
- Open access
-
YesWhether a free full text is available
- OA status
-
bronzeOpen access status per OpenAlex
- OA URL
-
https://nph.onlinelibrary.wiley.com/doi/pdfdirect/10.1111/nph.16065Direct OA link when available
- Concepts
-
Primordium, Auxin, Biology, Lateral root, Transcription factor, Cell biology, Arabidopsis, Cell division, Arabidopsis thaliana, Transcription (linguistics), Gene, Transcription factor II E, Genetics, Cell, Transcriptional regulation, Mutant, Philosophy, LinguisticsTop concepts (fields/topics) attached by OpenAlex
- Cited by
-
90Total citation count in OpenAlex
- Citations by year (recent)
-
2025: 13, 2024: 21, 2023: 7, 2022: 15, 2021: 26Per-year citation counts (last 5 years)
- References (count)
-
39Number of works referenced by this work
- Related works (count)
-
10Other works algorithmically related by OpenAlex
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| referenced_works | https://openalex.org/W2112531653, https://openalex.org/W2116122104, https://openalex.org/W2168779667, https://openalex.org/W2104861768, https://openalex.org/W2159490723, https://openalex.org/W1915361971, https://openalex.org/W1980186302, https://openalex.org/W2007239787, https://openalex.org/W2497111900, https://openalex.org/W2147070415, https://openalex.org/W2064483138, https://openalex.org/W2126607592, https://openalex.org/W2228103413, https://openalex.org/W1922122291, https://openalex.org/W2045228806, https://openalex.org/W2124207898, https://openalex.org/W2047364563, https://openalex.org/W2139244050, https://openalex.org/W2889484641, https://openalex.org/W2094710069, https://openalex.org/W1980400357, https://openalex.org/W2107272769, https://openalex.org/W2140173557, https://openalex.org/W2401562190, https://openalex.org/W2507343683, https://openalex.org/W2167279371, https://openalex.org/W2136136435, https://openalex.org/W2529052661, https://openalex.org/W2903888242, https://openalex.org/W2150431323, https://openalex.org/W2162790219, https://openalex.org/W2258855185, https://openalex.org/W1598433638, https://openalex.org/W2276648252, https://openalex.org/W1976387692, https://openalex.org/W2102569081, https://openalex.org/W2582743722, https://openalex.org/W2146526817, https://openalex.org/W4253819953 |
| referenced_works_count | 39 |
| abstract_inverted_index., | 91 |
| abstract_inverted_index.. | 112 |
| abstract_inverted_index.a | 37 |
| abstract_inverted_index.16 | 44 |
| abstract_inverted_index.LR | 32, 60, 64, 71, 96, 129, 143, 150 |
| abstract_inverted_index.We | 66, 99, 113 |
| abstract_inverted_index.an | 46, 79 |
| abstract_inverted_index.by | 10, 17, 36, 76 |
| abstract_inverted_index.in | 5, 59, 78 |
| abstract_inverted_index.is | 8, 50, 93, 104, 118 |
| abstract_inverted_index.of | 13, 31, 52, 110, 124, 128, 136, 156 |
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| abstract_inverted_index.Our | 146 |
| abstract_inverted_index.The | 27 |
| abstract_inverted_index.and | 21, 132, 160 |
| abstract_inverted_index.are | 34, 74 |
| abstract_inverted_index.for | 23, 70, 95, 106 |
| abstract_inverted_index.key | 54, 68 |
| abstract_inverted_index.new | 25 |
| abstract_inverted_index.one | 51 |
| abstract_inverted_index.the | 53, 86, 107, 121, 139, 153 |
| abstract_inverted_index.(LR) | 3 |
| abstract_inverted_index.cell | 19, 126 |
| abstract_inverted_index.gene | 89 |
| abstract_inverted_index.root | 2 |
| abstract_inverted_index.show | 114 |
| abstract_inverted_index.that | 73, 101, 115, 133, 149 |
| abstract_inverted_index.LBD16 | 77, 82, 102, 159 |
| abstract_inverted_index.ORGAN | 42 |
| abstract_inverted_index.PUCHI | 90, 111, 116, 137 |
| abstract_inverted_index.after | 120 |
| abstract_inverted_index.auxin | 39, 57 |
| abstract_inverted_index.cells | 62, 131 |
| abstract_inverted_index.first | 122 |
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| abstract_inverted_index.phase | 141 |
| abstract_inverted_index.round | 123 |
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| abstract_inverted_index.PUCHI. | 161 |
| abstract_inverted_index.cells, | 15 |
| abstract_inverted_index.during | 138 |
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| abstract_inverted_index.Lateral | 1 |
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| abstract_inverted_index.manner. | 81 |
| abstract_inverted_index.results | 147 |
| abstract_inverted_index.targets | 83 |
| abstract_inverted_index.(LBD16), | 45 |
| abstract_inverted_index.activity | 103 |
| abstract_inverted_index.disrupts | 142 |
| abstract_inverted_index.division | 12, 127 |
| abstract_inverted_index.followed | 16 |
| abstract_inverted_index.indicate | 148 |
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| abstract_inverted_index.primordia. | 26 |
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| abstract_inverted_index.initiation. | 65 |
| abstract_inverted_index.patterning. | 98 |
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| abstract_inverted_index.proliferation | 20 |
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| abstract_inverted_index.auxin‐inducible | 47, 108 |
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| cited_by_percentile_year.min | 98 |
| corresponding_author_ids | https://openalex.org/A5082342641 |
| countries_distinct_count | 1 |
| institutions_distinct_count | 14 |
| corresponding_institution_ids | https://openalex.org/I65837984 |
| citation_normalized_percentile.value | 0.9912671 |
| citation_normalized_percentile.is_in_top_1_percent | False |
| citation_normalized_percentile.is_in_top_10_percent | True |