Letter to the Editor: Significant mutation enrichment in inverted repeat sites of new SARS-CoV-2 strains Article Swipe
Martin Bartas
,
Pratik Goswami
,
Matej Lexa
,
Jiří Červeň
,
Adriana Volná
,
Miroslav Fojta
,
Václav Brázda
,
Petr Pečínka
·
YOU?
·
· 2021
· Open Access
·
· DOI: https://doi.org/10.1093/bib/bbab129
YOU?
·
· 2021
· Open Access
·
· DOI: https://doi.org/10.1093/bib/bbab129
In a recently published paper, we have found that SARS-CoV-2 hot-spot mutations are significantly associated with inverted repeat loci and CG dinucleotides. However, fast-spreading strains with new mutations (so-called mink farm mutations, England mutations and Japan mutations) have been recently described. We used the new datasets to check the positioning of mutation sites in genomes of the new SARS-CoV-2 strains. Using an open-access Palindrome analyzer tool, we found mutations in these new strains to be significantly enriched in inverted repeat loci.
Related Topics
Concepts
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
Coronavirus disease 2019 (COVID-19)
2019-20 coronavirus outbreak
Mutation
Virology
Biology
Genetics
Computational biology
Medicine
Gene
Disease
Outbreak
Pathology
Infectious disease (medical specialty)
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- Language
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- Landing Page
- https://doi.org/10.1093/bib/bbab129
- https://academic.oup.com/bib/article-pdf/22/5/bbab129/40260915/bbab129.pdf
- OA Status
- hybrid
- Cited By
- 3
- References
- 4
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W3150114118
All OpenAlex metadata
Raw OpenAlex JSON
- OpenAlex ID
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https://openalex.org/W3150114118Canonical identifier for this work in OpenAlex
- DOI
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https://doi.org/10.1093/bib/bbab129Digital Object Identifier
- Title
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Letter to the Editor: Significant mutation enrichment in inverted repeat sites of new SARS-CoV-2 strainsWork title
- Type
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letterOpenAlex work type
- Language
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enPrimary language
- Publication year
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2021Year of publication
- Publication date
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2021-03-20Full publication date if available
- Authors
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Martin Bartas, Pratik Goswami, Matej Lexa, Jiří Červeň, Adriana Volná, Miroslav Fojta, Václav Brázda, Petr PečínkaList of authors in order
- Landing page
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https://doi.org/10.1093/bib/bbab129Publisher landing page
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https://academic.oup.com/bib/article-pdf/22/5/bbab129/40260915/bbab129.pdfDirect link to full text PDF
- Open access
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YesWhether a free full text is available
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hybridOpen access status per OpenAlex
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https://academic.oup.com/bib/article-pdf/22/5/bbab129/40260915/bbab129.pdfDirect OA link when available
- Concepts
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Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), Coronavirus disease 2019 (COVID-19), 2019-20 coronavirus outbreak, Mutation, Virology, Biology, Genetics, Computational biology, Medicine, Gene, Disease, Outbreak, Pathology, Infectious disease (medical specialty)Top concepts (fields/topics) attached by OpenAlex
- Cited by
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3Total citation count in OpenAlex
- Citations by year (recent)
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2024: 1, 2023: 1, 2022: 1Per-year citation counts (last 5 years)
- References (count)
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4Number of works referenced by this work
- Related works (count)
-
10Other works algorithmically related by OpenAlex
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