Measurement of the Persistence Length of Cytoskeletal Filaments using Curvature Distributions Article Swipe
Pattipong Wisanpitayakorn
,
Keith J. Mickolajczyk
,
William O. Hancock
,
Luis Vidali
,
Erkan Tüzel
·
YOU?
·
· 2018
· Open Access
·
· DOI: https://doi.org/10.1101/252551
YOU?
·
· 2018
· Open Access
·
· DOI: https://doi.org/10.1101/252551
Cytoskeletal filaments such as microtubules and actin filaments play important roles in the mechanical integrity of cells and the ability of cells to respond to their environment. Measuring the mechanical properties of cytoskeletal structures is crucial for gaining insight into intracellular mechanical stresses and their role in regulating cellular processes. One of the ways to characterize these mechanical properties is by measuring their persistence length, the average length over which filaments stay straight. There are several approaches in the literature for measuring filament deformations, including Fourier analysis of images obtained using fluorescence microscopy. Here, we show how curvature distributions can be used as an alternative tool to quantify bio-filament deformations, and investigate how the apparent stiffness of filaments depends on the resolution and noise of the imaging system. We present analytical calculations of the scaling curvature distributions as a function of filament discretization, and test our predictions by comparing Monte Carlo simulations to results from existing techniques. We also apply our approach to microtubules and actin filaments obtained from in vitro gliding assay experiments with high densities of non-functional motors, and calculate the persistence length of these filaments. The presented curvature analysis is significantly more accurate compared to existing approaches for small data sets, and can be readily applied to both in vitro or in vivo filament data through the use of an ImageJ plugin we provide.
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- Type
- preprint
- Language
- en
- Landing Page
- https://doi.org/10.1101/252551
- https://www.biorxiv.org/content/biorxiv/early/2018/01/23/252551.full.pdf
- OA Status
- green
- Cited By
- 7
- References
- 50
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W2951815122
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- OpenAlex ID
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https://openalex.org/W2951815122Canonical identifier for this work in OpenAlex
- DOI
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https://doi.org/10.1101/252551Digital Object Identifier
- Title
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Measurement of the Persistence Length of Cytoskeletal Filaments using Curvature DistributionsWork title
- Type
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preprintOpenAlex work type
- Language
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enPrimary language
- Publication year
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2018Year of publication
- Publication date
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2018-01-23Full publication date if available
- Authors
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Pattipong Wisanpitayakorn, Keith J. Mickolajczyk, William O. Hancock, Luis Vidali, Erkan TüzelList of authors in order
- Landing page
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https://doi.org/10.1101/252551Publisher landing page
- PDF URL
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https://www.biorxiv.org/content/biorxiv/early/2018/01/23/252551.full.pdfDirect link to full text PDF
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YesWhether a free full text is available
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greenOpen access status per OpenAlex
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https://www.biorxiv.org/content/biorxiv/early/2018/01/23/252551.full.pdfDirect OA link when available
- Concepts
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Persistence length, Protein filament, Curvature, Cytoskeleton, Microtubule, Biological system, Intermediate filament, Physics, Actin, Biophysics, Materials science, Chemistry, Biology, Geometry, Mathematics, Cell biology, Cell, Nuclear magnetic resonance, Polymer, Composite material, BiochemistryTop concepts (fields/topics) attached by OpenAlex
- Cited by
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7Total citation count in OpenAlex
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2022: 1, 2021: 2, 2020: 3, 2018: 1Per-year citation counts (last 5 years)
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50Number of works referenced by this work
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10Other works algorithmically related by OpenAlex
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