Molecular mapping and validation of quantitative trait loci for content of micronutrients in wheat grain Article Swipe
Xiangdong Chen
,
Junchao You
,
Nannan Dong
,
Di Wu
,
Die Zhao
,
Rui Yong
,
Wenjing Hu
·
YOU?
·
· 2025
· Open Access
·
· DOI: https://doi.org/10.3389/fpls.2024.1522465
YOU?
·
· 2025
· Open Access
·
· DOI: https://doi.org/10.3389/fpls.2024.1522465
Manganese (Mn), iron (Fe), copper (Cu), zinc (Zn), and selenium (Se) are essential micronutrients for human health. However, the genetic basis for the content of Mn, Fe, Cu, Zn, and Se in wheat grains remains unclear. A recombinant inbred lines (RIL) population derived from Yangmai 4/Yanzhan 1 (YM4/YZ1) with wheat 55K single nucleotide polymorphism (SNP) arrays and micronutrient content of two environments was used to construct a genetic linkage map and dissect the quantitative trait loci (QTL) for the content of Mn, Fe, Cu, Zn, and Se in wheat. A total of 8 QTL were detected and located on chromosomes 1A, 1B, 2D, 4D, 7A, and 7D, respectively. Among them, QFe.yaas-2D and QSe.yaas-2D were co-located on chromosome 2D, while QMn.yaas-4D and QZn.yaas-4D were co-located on chromosome 4D, which were in the dwarfing locus of Rht-D1 region. The positive alleles of QCu.yaas-1A , QMn.yaas-1B , and QZn.yaas-7D were contributed by YZ1 and explained 7.66–19.92% of the phenotypic variances, while the positive alleles of QFe.yaas-2D , QSe.yaas-2D , QMn.yaas-4D , QZn.yaas-4D , and QCu.yaas-7A were contributed by YM4 and explained 5.77–20.11% of the phenotypic variances. The positive alleles of QCu.yaas-1A , QMn.yaas-1B , and QMn/Zn.yaas-4D increased TGW by 3.52%, 3.45%, and 7.51% respectively, while the positive alleles of QFe/Se.yaas-2D decreased TGW by 6.45%. Six SNP markers flanked the target QTL were converted into Kompetitive allele specific PCR (KASP) markers, and their effects were validated in a panel of one hundred and forty-nine wheat advanced lines. Twenty-five advanced lines harboring at least five positive alleles were identified in the validation populations. A total of 60 and 51 high-confidence annotated genes for QFe/Se.yaas-2D and QMn/Zn.yaas-4D were identified using the International Wheat Genome Sequencing Consortium Reference Sequence v2.1 (IWGSC RefSeq v2.1), respectively. Some genes in these two regions were involved in stress tolerance, growth development, Zn synthesis in plants. These results provide the basis for fine-mapping the target QTL of micronutrient content and marker-assisted selection in grain quality breeding programs.
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- Type
- article
- Language
- en
- Landing Page
- https://doi.org/10.3389/fpls.2024.1522465
- https://www.frontiersin.org/journals/plant-science/articles/10.3389/fpls.2024.1522465/pdf
- OA Status
- gold
- Cited By
- 2
- References
- 39
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W4406542867
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Raw OpenAlex JSON
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https://doi.org/10.3389/fpls.2024.1522465Digital Object Identifier
- Title
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Molecular mapping and validation of quantitative trait loci for content of micronutrients in wheat grainWork title
- Type
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articleOpenAlex work type
- Language
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enPrimary language
- Publication year
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2025Year of publication
- Publication date
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2025-01-17Full publication date if available
- Authors
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Xiangdong Chen, Junchao You, Nannan Dong, Di Wu, Die Zhao, Rui Yong, Wenjing HuList of authors in order
- Landing page
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https://doi.org/10.3389/fpls.2024.1522465Publisher landing page
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https://www.frontiersin.org/journals/plant-science/articles/10.3389/fpls.2024.1522465/pdfDirect link to full text PDF
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goldOpen access status per OpenAlex
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https://www.frontiersin.org/journals/plant-science/articles/10.3389/fpls.2024.1522465/pdfDirect OA link when available
- Concepts
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Quantitative trait locus, Biology, Micronutrient, Trait, Agronomy, Wheat grain, Biotechnology, Genetics, Gene, Chemistry, Computer science, Organic chemistry, Programming languageTop concepts (fields/topics) attached by OpenAlex
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2Total citation count in OpenAlex
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10Other works algorithmically related by OpenAlex
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