MtOrt: An empirical mitochondrial amino acid substitution model for evolutionary studies of Orthoptera insects Article Swipe
Huihui Chang
,
Yimeng Nie
,
Nan Zhang
,
Xue Zhang
,
Huimin Sun
,
Ying Mao
,
Zhongying Qiu
,
Yuan Huang
·
YOU?
·
· 2020
· Open Access
·
· DOI: https://doi.org/10.21203/rs.2.20989/v2
YOU?
·
· 2020
· Open Access
·
· DOI: https://doi.org/10.21203/rs.2.20989/v2
Background Amino acid substitution models play an important role in inferring phylogenies from mitochondrial proteins. Although different amino acid substitution models have been proposed, only a few were estimated from mitochondrial protein sequences for specific taxa such as the mtArt model for Arthropoda. The increasing of mitochondrial genome data from broad Orthoptera taxa provides an opportunity to estimate the Orthoptera-specific mitochondrial amino acid empirical model. Results We sequenced complete mitochondrial genomes of 54 Orthoptera species, and then estimated an amino acid substitution model (named mtOrt) by maximum likelihood method based on the 283 complete mitochondrial genomes available currently. The results indicated that there are obvious differences between mtOrt and the existing model, and the new model can better fit the Orthoptera mitochondrial protein datasets. Moreover, topologies of trees constructed using mtOrt and existing models are frequently different. MtOrt does indeed have an impact on likelihood improvement as well as tree topologies. The comparisons between the topologies of trees constructed using mtOrt and existing models show that the new model outperforms the existing models in inferring phylogenies from Orthoptera mitochondrial protein data. Conclusions The new mitochondrial amino acid substitution model of Orthoptera shows obvious differences from the existing models, and outperforms the existing models in inferring phylogenies from Orthoptera mitochondrial protein sequences.
Related Topics
Concepts
Orthoptera
Substitution (logic)
Amino acid substitution
Amino acid
Biology
Zoology
Biochemistry
Computer science
Mutation
Gene
Programming language
Metadata
- Type
- preprint
- Language
- en
- Landing Page
- https://doi.org/10.21203/rs.2.20989/v2
- https://www.researchsquare.com/article/rs-11587/v2.pdf?c=1631847144000
- OA Status
- gold
- References
- 44
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W4248231632
All OpenAlex metadata
Raw OpenAlex JSON
- OpenAlex ID
-
https://openalex.org/W4248231632Canonical identifier for this work in OpenAlex
- DOI
-
https://doi.org/10.21203/rs.2.20989/v2Digital Object Identifier
- Title
-
MtOrt: An empirical mitochondrial amino acid substitution model for evolutionary studies of Orthoptera insectsWork title
- Type
-
preprintOpenAlex work type
- Language
-
enPrimary language
- Publication year
-
2020Year of publication
- Publication date
-
2020-04-06Full publication date if available
- Authors
-
Huihui Chang, Yimeng Nie, Nan Zhang, Xue Zhang, Huimin Sun, Ying Mao, Zhongying Qiu, Yuan HuangList of authors in order
- Landing page
-
https://doi.org/10.21203/rs.2.20989/v2Publisher landing page
- PDF URL
-
https://www.researchsquare.com/article/rs-11587/v2.pdf?c=1631847144000Direct link to full text PDF
- Open access
-
YesWhether a free full text is available
- OA status
-
goldOpen access status per OpenAlex
- OA URL
-
https://www.researchsquare.com/article/rs-11587/v2.pdf?c=1631847144000Direct OA link when available
- Concepts
-
Orthoptera, Substitution (logic), Amino acid substitution, Amino acid, Biology, Zoology, Biochemistry, Computer science, Mutation, Gene, Programming languageTop concepts (fields/topics) attached by OpenAlex
- Cited by
-
0Total citation count in OpenAlex
- References (count)
-
44Number of works referenced by this work
- Related works (count)
-
10Other works algorithmically related by OpenAlex
Full payload
| id | https://openalex.org/W4248231632 |
|---|---|
| doi | https://doi.org/10.21203/rs.2.20989/v2 |
| ids.doi | https://doi.org/10.21203/rs.2.20989/v2 |
| ids.openalex | https://openalex.org/W4248231632 |
| fwci | 0.0 |
| type | preprint |
| title | MtOrt: An empirical mitochondrial amino acid substitution model for evolutionary studies of Orthoptera insects |
| biblio.issue | |
| biblio.volume | |
| biblio.last_page | |
| biblio.first_page | |
| topics[0].id | https://openalex.org/T13269 |
| topics[0].field.id | https://openalex.org/fields/11 |
| topics[0].field.display_name | Agricultural and Biological Sciences |
| topics[0].score | 0.9984999895095825 |
| topics[0].domain.id | https://openalex.org/domains/1 |
| topics[0].domain.display_name | Life Sciences |
| topics[0].subfield.id | https://openalex.org/subfields/1105 |
| topics[0].subfield.display_name | Ecology, Evolution, Behavior and Systematics |
| topics[0].display_name | Orthoptera Research and Taxonomy |
| topics[1].id | https://openalex.org/T10012 |
| topics[1].field.id | https://openalex.org/fields/13 |
| topics[1].field.display_name | Biochemistry, Genetics and Molecular Biology |
| topics[1].score | 0.9976000189781189 |
| topics[1].domain.id | https://openalex.org/domains/1 |
| topics[1].domain.display_name | Life Sciences |
| topics[1].subfield.id | https://openalex.org/subfields/1311 |
| topics[1].subfield.display_name | Genetics |
| topics[1].display_name | Genetic diversity and population structure |
| topics[2].id | https://openalex.org/T10487 |
| topics[2].field.id | https://openalex.org/fields/11 |
| topics[2].field.display_name | Agricultural and Biological Sciences |
| topics[2].score | 0.9972000122070312 |
| topics[2].domain.id | https://openalex.org/domains/1 |
| topics[2].domain.display_name | Life Sciences |
| topics[2].subfield.id | https://openalex.org/subfields/1105 |
| topics[2].subfield.display_name | Ecology, Evolution, Behavior and Systematics |
| topics[2].display_name | Plant and animal studies |
| is_xpac | False |
| apc_list | |
| apc_paid | |
| concepts[0].id | https://openalex.org/C2778907336 |
| concepts[0].level | 2 |
| concepts[0].score | 0.8911593556404114 |
| concepts[0].wikidata | https://www.wikidata.org/wiki/Q167810 |
| concepts[0].display_name | Orthoptera |
| concepts[1].id | https://openalex.org/C2778220771 |
| concepts[1].level | 2 |
| concepts[1].score | 0.6775644421577454 |
| concepts[1].wikidata | https://www.wikidata.org/wiki/Q1522579 |
| concepts[1].display_name | Substitution (logic) |
| concepts[2].id | https://openalex.org/C2993683473 |
| concepts[2].level | 4 |
| concepts[2].score | 0.5434437394142151 |
| concepts[2].wikidata | https://www.wikidata.org/wiki/Q30693176 |
| concepts[2].display_name | Amino acid substitution |
| concepts[3].id | https://openalex.org/C515207424 |
| concepts[3].level | 2 |
| concepts[3].score | 0.49357569217681885 |
| concepts[3].wikidata | https://www.wikidata.org/wiki/Q8066 |
| concepts[3].display_name | Amino acid |
| concepts[4].id | https://openalex.org/C86803240 |
| concepts[4].level | 0 |
| concepts[4].score | 0.47604870796203613 |
| concepts[4].wikidata | https://www.wikidata.org/wiki/Q420 |
| concepts[4].display_name | Biology |
| concepts[5].id | https://openalex.org/C90856448 |
| concepts[5].level | 1 |
| concepts[5].score | 0.32976388931274414 |
| concepts[5].wikidata | https://www.wikidata.org/wiki/Q431 |
| concepts[5].display_name | Zoology |
| concepts[6].id | https://openalex.org/C55493867 |
| concepts[6].level | 1 |
| concepts[6].score | 0.2692537307739258 |
| concepts[6].wikidata | https://www.wikidata.org/wiki/Q7094 |
| concepts[6].display_name | Biochemistry |
| concepts[7].id | https://openalex.org/C41008148 |
| concepts[7].level | 0 |
| concepts[7].score | 0.17509394884109497 |
| concepts[7].wikidata | https://www.wikidata.org/wiki/Q21198 |
| concepts[7].display_name | Computer science |
| concepts[8].id | https://openalex.org/C501734568 |
| concepts[8].level | 3 |
| concepts[8].score | 0.10477551817893982 |
| concepts[8].wikidata | https://www.wikidata.org/wiki/Q42918 |
| concepts[8].display_name | Mutation |
| concepts[9].id | https://openalex.org/C104317684 |
| concepts[9].level | 2 |
| concepts[9].score | 0.08318495750427246 |
| concepts[9].wikidata | https://www.wikidata.org/wiki/Q7187 |
| concepts[9].display_name | Gene |
| concepts[10].id | https://openalex.org/C199360897 |
| concepts[10].level | 1 |
| concepts[10].score | 0.0 |
| concepts[10].wikidata | https://www.wikidata.org/wiki/Q9143 |
| concepts[10].display_name | Programming language |
| keywords[0].id | https://openalex.org/keywords/orthoptera |
| keywords[0].score | 0.8911593556404114 |
| keywords[0].display_name | Orthoptera |
| keywords[1].id | https://openalex.org/keywords/substitution |
| keywords[1].score | 0.6775644421577454 |
| keywords[1].display_name | Substitution (logic) |
| keywords[2].id | https://openalex.org/keywords/amino-acid-substitution |
| keywords[2].score | 0.5434437394142151 |
| keywords[2].display_name | Amino acid substitution |
| keywords[3].id | https://openalex.org/keywords/amino-acid |
| keywords[3].score | 0.49357569217681885 |
| keywords[3].display_name | Amino acid |
| keywords[4].id | https://openalex.org/keywords/biology |
| keywords[4].score | 0.47604870796203613 |
| keywords[4].display_name | Biology |
| keywords[5].id | https://openalex.org/keywords/zoology |
| keywords[5].score | 0.32976388931274414 |
| keywords[5].display_name | Zoology |
| keywords[6].id | https://openalex.org/keywords/biochemistry |
| keywords[6].score | 0.2692537307739258 |
| keywords[6].display_name | Biochemistry |
| keywords[7].id | https://openalex.org/keywords/computer-science |
| keywords[7].score | 0.17509394884109497 |
| keywords[7].display_name | Computer science |
| keywords[8].id | https://openalex.org/keywords/mutation |
| keywords[8].score | 0.10477551817893982 |
| keywords[8].display_name | Mutation |
| keywords[9].id | https://openalex.org/keywords/gene |
| keywords[9].score | 0.08318495750427246 |
| keywords[9].display_name | Gene |
| language | en |
| locations[0].id | doi:10.21203/rs.2.20989/v2 |
| locations[0].is_oa | True |
| locations[0].source | |
| locations[0].license | cc-by |
| locations[0].pdf_url | https://www.researchsquare.com/article/rs-11587/v2.pdf?c=1631847144000 |
| locations[0].version | acceptedVersion |
| locations[0].raw_type | posted-content |
| locations[0].license_id | https://openalex.org/licenses/cc-by |
| locations[0].is_accepted | True |
| locations[0].is_published | False |
| locations[0].raw_source_name | |
| locations[0].landing_page_url | https://doi.org/10.21203/rs.2.20989/v2 |
| indexed_in | crossref |
| authorships[0].author.id | https://openalex.org/A5070181153 |
| authorships[0].author.orcid | https://orcid.org/0000-0001-8053-8019 |
| authorships[0].author.display_name | Huihui Chang |
| authorships[0].countries | CN |
| authorships[0].affiliations[0].institution_ids | https://openalex.org/I88830068 |
| authorships[0].affiliations[0].raw_affiliation_string | Shaanxi Normal University |
| authorships[0].institutions[0].id | https://openalex.org/I88830068 |
| authorships[0].institutions[0].ror | https://ror.org/0170z8493 |
| authorships[0].institutions[0].type | education |
| authorships[0].institutions[0].lineage | https://openalex.org/I88830068 |
| authorships[0].institutions[0].country_code | CN |
| authorships[0].institutions[0].display_name | Shaanxi Normal University |
| authorships[0].author_position | first |
| authorships[0].raw_author_name | Huihui Chang |
| authorships[0].is_corresponding | False |
| authorships[0].raw_affiliation_strings | Shaanxi Normal University |
| authorships[1].author.id | https://openalex.org/A5062658256 |
| authorships[1].author.orcid | |
| authorships[1].author.display_name | Yimeng Nie |
| authorships[1].countries | CN |
| authorships[1].affiliations[0].institution_ids | https://openalex.org/I88830068 |
| authorships[1].affiliations[0].raw_affiliation_string | Shaanxi Normal University |
| authorships[1].institutions[0].id | https://openalex.org/I88830068 |
| authorships[1].institutions[0].ror | https://ror.org/0170z8493 |
| authorships[1].institutions[0].type | education |
| authorships[1].institutions[0].lineage | https://openalex.org/I88830068 |
| authorships[1].institutions[0].country_code | CN |
| authorships[1].institutions[0].display_name | Shaanxi Normal University |
| authorships[1].author_position | middle |
| authorships[1].raw_author_name | Yimeng Nie |
| authorships[1].is_corresponding | False |
| authorships[1].raw_affiliation_strings | Shaanxi Normal University |
| authorships[2].author.id | https://openalex.org/A5037214616 |
| authorships[2].author.orcid | https://orcid.org/0000-0002-8441-2242 |
| authorships[2].author.display_name | Nan Zhang |
| authorships[2].countries | CN |
| authorships[2].affiliations[0].institution_ids | https://openalex.org/I88830068 |
| authorships[2].affiliations[0].raw_affiliation_string | Shaanxi Normal University |
| authorships[2].institutions[0].id | https://openalex.org/I88830068 |
| authorships[2].institutions[0].ror | https://ror.org/0170z8493 |
| authorships[2].institutions[0].type | education |
| authorships[2].institutions[0].lineage | https://openalex.org/I88830068 |
| authorships[2].institutions[0].country_code | CN |
| authorships[2].institutions[0].display_name | Shaanxi Normal University |
| authorships[2].author_position | middle |
| authorships[2].raw_author_name | Nan Zhang |
| authorships[2].is_corresponding | False |
| authorships[2].raw_affiliation_strings | Shaanxi Normal University |
| authorships[3].author.id | https://openalex.org/A5100445824 |
| authorships[3].author.orcid | https://orcid.org/0000-0001-5785-8217 |
| authorships[3].author.display_name | Xue Zhang |
| authorships[3].countries | CN |
| authorships[3].affiliations[0].institution_ids | https://openalex.org/I88830068 |
| authorships[3].affiliations[0].raw_affiliation_string | Shaanxi Normal University |
| authorships[3].institutions[0].id | https://openalex.org/I88830068 |
| authorships[3].institutions[0].ror | https://ror.org/0170z8493 |
| authorships[3].institutions[0].type | education |
| authorships[3].institutions[0].lineage | https://openalex.org/I88830068 |
| authorships[3].institutions[0].country_code | CN |
| authorships[3].institutions[0].display_name | Shaanxi Normal University |
| authorships[3].author_position | middle |
| authorships[3].raw_author_name | Xue Zhang |
| authorships[3].is_corresponding | False |
| authorships[3].raw_affiliation_strings | Shaanxi Normal University |
| authorships[4].author.id | https://openalex.org/A5101979659 |
| authorships[4].author.orcid | https://orcid.org/0000-0002-9657-5209 |
| authorships[4].author.display_name | Huimin Sun |
| authorships[4].countries | CN |
| authorships[4].affiliations[0].institution_ids | https://openalex.org/I88830068 |
| authorships[4].affiliations[0].raw_affiliation_string | Shaanxi Normal University |
| authorships[4].institutions[0].id | https://openalex.org/I88830068 |
| authorships[4].institutions[0].ror | https://ror.org/0170z8493 |
| authorships[4].institutions[0].type | education |
| authorships[4].institutions[0].lineage | https://openalex.org/I88830068 |
| authorships[4].institutions[0].country_code | CN |
| authorships[4].institutions[0].display_name | Shaanxi Normal University |
| authorships[4].author_position | middle |
| authorships[4].raw_author_name | Huimin Sun |
| authorships[4].is_corresponding | False |
| authorships[4].raw_affiliation_strings | Shaanxi Normal University |
| authorships[5].author.id | https://openalex.org/A5107985523 |
| authorships[5].author.orcid | https://orcid.org/0000-0001-8055-115X |
| authorships[5].author.display_name | Ying Mao |
| authorships[5].countries | CN |
| authorships[5].affiliations[0].institution_ids | https://openalex.org/I88830068 |
| authorships[5].affiliations[0].raw_affiliation_string | Shaanxi Normal University |
| authorships[5].institutions[0].id | https://openalex.org/I88830068 |
| authorships[5].institutions[0].ror | https://ror.org/0170z8493 |
| authorships[5].institutions[0].type | education |
| authorships[5].institutions[0].lineage | https://openalex.org/I88830068 |
| authorships[5].institutions[0].country_code | CN |
| authorships[5].institutions[0].display_name | Shaanxi Normal University |
| authorships[5].author_position | middle |
| authorships[5].raw_author_name | Ying Mao |
| authorships[5].is_corresponding | False |
| authorships[5].raw_affiliation_strings | Shaanxi Normal University |
| authorships[6].author.id | https://openalex.org/A5044270936 |
| authorships[6].author.orcid | |
| authorships[6].author.display_name | Zhongying Qiu |
| authorships[6].countries | CN |
| authorships[6].affiliations[0].institution_ids | https://openalex.org/I4210107780 |
| authorships[6].affiliations[0].raw_affiliation_string | Xi´an Medical University |
| authorships[6].institutions[0].id | https://openalex.org/I4210107780 |
| authorships[6].institutions[0].ror | https://ror.org/01fmc2233 |
| authorships[6].institutions[0].type | education |
| authorships[6].institutions[0].lineage | https://openalex.org/I4210107780 |
| authorships[6].institutions[0].country_code | CN |
| authorships[6].institutions[0].display_name | Xi'an Medical University |
| authorships[6].author_position | middle |
| authorships[6].raw_author_name | Zhongying Qiu |
| authorships[6].is_corresponding | False |
| authorships[6].raw_affiliation_strings | Xi´an Medical University |
| authorships[7].author.id | https://openalex.org/A5042328943 |
| authorships[7].author.orcid | https://orcid.org/0000-0001-7683-9193 |
| authorships[7].author.display_name | Yuan Huang |
| authorships[7].countries | CN |
| authorships[7].affiliations[0].institution_ids | https://openalex.org/I88830068 |
| authorships[7].affiliations[0].raw_affiliation_string | Shaanxi Normal University |
| authorships[7].institutions[0].id | https://openalex.org/I88830068 |
| authorships[7].institutions[0].ror | https://ror.org/0170z8493 |
| authorships[7].institutions[0].type | education |
| authorships[7].institutions[0].lineage | https://openalex.org/I88830068 |
| authorships[7].institutions[0].country_code | CN |
| authorships[7].institutions[0].display_name | Shaanxi Normal University |
| authorships[7].author_position | last |
| authorships[7].raw_author_name | Yuan Huang |
| authorships[7].is_corresponding | True |
| authorships[7].raw_affiliation_strings | Shaanxi Normal University |
| has_content.pdf | True |
| has_content.grobid_xml | True |
| is_paratext | False |
| open_access.is_oa | True |
| open_access.oa_url | https://www.researchsquare.com/article/rs-11587/v2.pdf?c=1631847144000 |
| open_access.oa_status | gold |
| open_access.any_repository_has_fulltext | False |
| created_date | 2025-10-10T00:00:00 |
| display_name | MtOrt: An empirical mitochondrial amino acid substitution model for evolutionary studies of Orthoptera insects |
| has_fulltext | False |
| is_retracted | False |
| updated_date | 2025-11-06T03:46:38.306776 |
| primary_topic.id | https://openalex.org/T13269 |
| primary_topic.field.id | https://openalex.org/fields/11 |
| primary_topic.field.display_name | Agricultural and Biological Sciences |
| primary_topic.score | 0.9984999895095825 |
| primary_topic.domain.id | https://openalex.org/domains/1 |
| primary_topic.domain.display_name | Life Sciences |
| primary_topic.subfield.id | https://openalex.org/subfields/1105 |
| primary_topic.subfield.display_name | Ecology, Evolution, Behavior and Systematics |
| primary_topic.display_name | Orthoptera Research and Taxonomy |
| related_works | https://openalex.org/W2331216766, https://openalex.org/W4255149369, https://openalex.org/W2622907957, https://openalex.org/W3186625252, https://openalex.org/W2899747918, https://openalex.org/W2089387174, https://openalex.org/W2143210482, https://openalex.org/W1926060057, https://openalex.org/W1566785938, https://openalex.org/W2400403148 |
| cited_by_count | 0 |
| locations_count | 1 |
| best_oa_location.id | doi:10.21203/rs.2.20989/v2 |
| best_oa_location.is_oa | True |
| best_oa_location.source | |
| best_oa_location.license | cc-by |
| best_oa_location.pdf_url | https://www.researchsquare.com/article/rs-11587/v2.pdf?c=1631847144000 |
| best_oa_location.version | acceptedVersion |
| best_oa_location.raw_type | posted-content |
| best_oa_location.license_id | https://openalex.org/licenses/cc-by |
| best_oa_location.is_accepted | True |
| best_oa_location.is_published | False |
| best_oa_location.raw_source_name | |
| best_oa_location.landing_page_url | https://doi.org/10.21203/rs.2.20989/v2 |
| primary_location.id | doi:10.21203/rs.2.20989/v2 |
| primary_location.is_oa | True |
| primary_location.source | |
| primary_location.license | cc-by |
| primary_location.pdf_url | https://www.researchsquare.com/article/rs-11587/v2.pdf?c=1631847144000 |
| primary_location.version | acceptedVersion |
| primary_location.raw_type | posted-content |
| primary_location.license_id | https://openalex.org/licenses/cc-by |
| primary_location.is_accepted | True |
| primary_location.is_published | False |
| primary_location.raw_source_name | |
| primary_location.landing_page_url | https://doi.org/10.21203/rs.2.20989/v2 |
| publication_date | 2020-04-06 |
| publication_year | 2020 |
| referenced_works | https://openalex.org/W2097818324, https://openalex.org/W1989083100, https://openalex.org/W2041076979, https://openalex.org/W2121015941, https://openalex.org/W2742160024, https://openalex.org/W2163627198, https://openalex.org/W2096702350, https://openalex.org/W3001081943, https://openalex.org/W2157697137, https://openalex.org/W2903002006, https://openalex.org/W2131473084, https://openalex.org/W4236924509, https://openalex.org/W2799524357, https://openalex.org/W2163661998, https://openalex.org/W2100858902, https://openalex.org/W2170083987, https://openalex.org/W2586757117, https://openalex.org/W2614081736, https://openalex.org/W2111647009, https://openalex.org/W2111405777, https://openalex.org/W1991804333, https://openalex.org/W2137756176, https://openalex.org/W2315483380, https://openalex.org/W2031366058, https://openalex.org/W2143210482, https://openalex.org/W2062018285, https://openalex.org/W2017519756, https://openalex.org/W2625923728, https://openalex.org/W2162517860, https://openalex.org/W2140157298, https://openalex.org/W1973101413, https://openalex.org/W2128880918, https://openalex.org/W2120238417, https://openalex.org/W2762492061, https://openalex.org/W2132926880, https://openalex.org/W2026881360, https://openalex.org/W4250124804, https://openalex.org/W2144030303, https://openalex.org/W2150270014, https://openalex.org/W2810717300, https://openalex.org/W45443282, https://openalex.org/W2010026647, https://openalex.org/W2016811301, https://openalex.org/W1856600885 |
| referenced_works_count | 44 |
| abstract_inverted_index.a | 26 |
| abstract_inverted_index.54 | 73 |
| abstract_inverted_index.We | 67 |
| abstract_inverted_index.an | 7, 55, 79, 142 |
| abstract_inverted_index.as | 38, 147, 149 |
| abstract_inverted_index.by | 86 |
| abstract_inverted_index.in | 10, 174, 204 |
| abstract_inverted_index.of | 46, 72, 127, 157, 190 |
| abstract_inverted_index.on | 91, 144 |
| abstract_inverted_index.to | 57 |
| abstract_inverted_index.283 | 93 |
| abstract_inverted_index.The | 44, 99, 152, 183 |
| abstract_inverted_index.and | 76, 109, 113, 132, 162, 199 |
| abstract_inverted_index.are | 104, 135 |
| abstract_inverted_index.can | 117 |
| abstract_inverted_index.few | 27 |
| abstract_inverted_index.fit | 119 |
| abstract_inverted_index.for | 34, 42 |
| abstract_inverted_index.new | 115, 168, 184 |
| abstract_inverted_index.the | 39, 59, 92, 110, 114, 120, 155, 167, 171, 196, 201 |
| abstract_inverted_index.acid | 3, 19, 63, 81, 187 |
| abstract_inverted_index.been | 23 |
| abstract_inverted_index.data | 49 |
| abstract_inverted_index.does | 139 |
| abstract_inverted_index.from | 13, 30, 50, 177, 195, 207 |
| abstract_inverted_index.have | 22, 141 |
| abstract_inverted_index.only | 25 |
| abstract_inverted_index.play | 6 |
| abstract_inverted_index.role | 9 |
| abstract_inverted_index.show | 165 |
| abstract_inverted_index.such | 37 |
| abstract_inverted_index.taxa | 36, 53 |
| abstract_inverted_index.that | 102, 166 |
| abstract_inverted_index.then | 77 |
| abstract_inverted_index.tree | 150 |
| abstract_inverted_index.well | 148 |
| abstract_inverted_index.were | 28 |
| abstract_inverted_index.Amino | 2 |
| abstract_inverted_index.MtOrt | 138 |
| abstract_inverted_index.amino | 18, 62, 80, 186 |
| abstract_inverted_index.based | 90 |
| abstract_inverted_index.broad | 51 |
| abstract_inverted_index.data. | 181 |
| abstract_inverted_index.model | 41, 83, 116, 169, 189 |
| abstract_inverted_index.mtArt | 40 |
| abstract_inverted_index.mtOrt | 108, 131, 161 |
| abstract_inverted_index.shows | 192 |
| abstract_inverted_index.there | 103 |
| abstract_inverted_index.trees | 128, 158 |
| abstract_inverted_index.using | 130, 160 |
| abstract_inverted_index.(named | 84 |
| abstract_inverted_index.better | 118 |
| abstract_inverted_index.genome | 48 |
| abstract_inverted_index.impact | 143 |
| abstract_inverted_index.indeed | 140 |
| abstract_inverted_index.method | 89 |
| abstract_inverted_index.model, | 112 |
| abstract_inverted_index.model. | 65 |
| abstract_inverted_index.models | 5, 21, 134, 164, 173, 203 |
| abstract_inverted_index.mtOrt) | 85 |
| abstract_inverted_index.Results | 66 |
| abstract_inverted_index.between | 107, 154 |
| abstract_inverted_index.genomes | 71, 96 |
| abstract_inverted_index.maximum | 87 |
| abstract_inverted_index.models, | 198 |
| abstract_inverted_index.obvious | 105, 193 |
| abstract_inverted_index.protein | 32, 123, 180, 210 |
| abstract_inverted_index.results | 100 |
| abstract_inverted_index.Although | 16 |
| abstract_inverted_index.complete | 69, 94 |
| abstract_inverted_index.estimate | 58 |
| abstract_inverted_index.existing | 111, 133, 163, 172, 197, 202 |
| abstract_inverted_index.provides | 54 |
| abstract_inverted_index.species, | 75 |
| abstract_inverted_index.specific | 35 |
| abstract_inverted_index.Moreover, | 125 |
| abstract_inverted_index.available | 97 |
| abstract_inverted_index.datasets. | 124 |
| abstract_inverted_index.different | 17 |
| abstract_inverted_index.empirical | 64 |
| abstract_inverted_index.estimated | 29, 78 |
| abstract_inverted_index.important | 8 |
| abstract_inverted_index.indicated | 101 |
| abstract_inverted_index.inferring | 11, 175, 205 |
| abstract_inverted_index.proposed, | 24 |
| abstract_inverted_index.proteins. | 15 |
| abstract_inverted_index.sequenced | 68 |
| abstract_inverted_index.sequences | 33 |
| abstract_inverted_index.Background | 1 |
| abstract_inverted_index.Orthoptera | 52, 74, 121, 178, 191, 208 |
| abstract_inverted_index.currently. | 98 |
| abstract_inverted_index.different. | 137 |
| abstract_inverted_index.frequently | 136 |
| abstract_inverted_index.increasing | 45 |
| abstract_inverted_index.likelihood | 88, 145 |
| abstract_inverted_index.sequences. | 211 |
| abstract_inverted_index.topologies | 126, 156 |
| abstract_inverted_index.Arthropoda. | 43 |
| abstract_inverted_index.Conclusions | 182 |
| abstract_inverted_index.comparisons | 153 |
| abstract_inverted_index.constructed | 129, 159 |
| abstract_inverted_index.differences | 106, 194 |
| abstract_inverted_index.improvement | 146 |
| abstract_inverted_index.opportunity | 56 |
| abstract_inverted_index.outperforms | 170, 200 |
| abstract_inverted_index.phylogenies | 12, 176, 206 |
| abstract_inverted_index.topologies. | 151 |
| abstract_inverted_index.substitution | 4, 20, 82, 188 |
| abstract_inverted_index.mitochondrial | 14, 31, 47, 61, 70, 95, 122, 179, 185, 209 |
| abstract_inverted_index.Orthoptera-specific | 60 |
| abstract_inverted_index.<title>Abstract</title> | 0 |
| cited_by_percentile_year | |
| corresponding_author_ids | https://openalex.org/A5042328943 |
| countries_distinct_count | 1 |
| institutions_distinct_count | 8 |
| corresponding_institution_ids | https://openalex.org/I88830068 |
| citation_normalized_percentile.value | 0.22855038 |
| citation_normalized_percentile.is_in_top_1_percent | False |
| citation_normalized_percentile.is_in_top_10_percent | False |