nextgenusfs/funannotate: funannotate v1.5.2 Article Swipe
YOU?
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· 2019
· Open Access
·
· DOI: https://doi.org/10.5281/zenodo.2576527
· OA: W3208196996
restructure <code>augustus</code> accessory scripts calls so that they don't have to be in same location as the exe, i.e. this used to be a bug if you used conda installed <code>augustus</code> as it puts the scripts in a different location than the default augustus release folder added a check to <code>busco</code> routine to default to a single thread if <code>tblastn</code> version is found that might have multithread issues allow a min number of gene models to use for Augustus training, <code>--min_training_models</code> in <code>funannotate predict</code> limit genemark to 64 cpus -- it will die if you try to give it more fix shortBAM declaration in <code>funannotate update</code> for <code>genemark-ET</code> set score of introns to 500, otherwise seems to be dying. updated weights for different gene models -- would be nice to have this be a customizable option....
