NH4+-mediated Protein Phosphorylation in Rice Roots Article Swipe
Xiao Feng Zhu
,
Wan Hui Cai
,
Jin Hee Jung
,
Yuan Hu Xuan
·
YOU?
·
· 2015
· Open Access
·
· DOI: https://doi.org/10.1515/abcsb-2015-0022
YOU?
·
· 2015
· Open Access
·
· DOI: https://doi.org/10.1515/abcsb-2015-0022
NH 4 + is an important N-source which regulates plant growth and development. However, the underlying mechanism of NH 4 + uptake and its-mediated signaling is poorly understood. Here, we performed phosphoproteomic studies using the titanium dioxide (TiO 2 )-mediated phosphopeptides collection method together with LC-MS analysis. The results indicated that phosphorylation levels of 23 and 43 peptides/proteins involved in diverse aspects, including metabolism, transport and signaling pathway, were decreased and increased respectively after NH 4 + treatment in rice roots. Among 23 proteins detected, IDD10, a key transcription factor in ammonium signaling, was identified to reduce phosphorylation level of S313 residue. Further biochemical analysis using IDD10-GFP transgenic plants and immunoprecipitation assay confirmed that NH 4 + supply reduces IDD10 phosphorylation level. Phosphorylation of ammonium transporter 1;1 (AMT1;1) was increased upon NH 4 + treatment. Interestingly, phosphorylation of T446, a rice specific residue against Arabidopsis was identified. It was also established that phosphorylation of T452 is conserved with T460 of Arabidopsis AMT1;1. Yeast complementation assay with transformation of phosphomimic forms of AMT1;1 (T446/D and T452/D) into 31019b strain revealed that phosphorylation at T446 and T452 residues abolished AMT1;1 activity, while their plasma membrane localization was not changed. Our analyses show that many proteins were phosphorylated or dephosphorylated by NH 4 + that may provide important evidence for studying ammonium uptake and its mediated signaling by which rice growth and development are regulated.
Related Topics
Concepts
Phosphorylation
Biology
Protein phosphorylation
Arabidopsis
Complementation
Biochemistry
Signal transduction
Cell biology
Immunoprecipitation
Phosphoproteomics
Transcription factor
Protein kinase A
Mutant
Gene
Metadata
- Type
- article
- Language
- en
- Landing Page
- https://doi.org/10.1515/abcsb-2015-0022
- http://journals.pan.pl/Content/81858/PDF/03_zhu.pdf
- OA Status
- diamond
- Cited By
- 5
- References
- 34
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W2327161365
All OpenAlex metadata
Raw OpenAlex JSON
- OpenAlex ID
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https://openalex.org/W2327161365Canonical identifier for this work in OpenAlex
- DOI
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https://doi.org/10.1515/abcsb-2015-0022Digital Object Identifier
- Title
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NH4+-mediated Protein Phosphorylation in Rice RootsWork title
- Type
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articleOpenAlex work type
- Language
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enPrimary language
- Publication year
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2015Year of publication
- Publication date
-
2015-12-01Full publication date if available
- Authors
-
Xiao Feng Zhu, Wan Hui Cai, Jin Hee Jung, Yuan Hu XuanList of authors in order
- Landing page
-
https://doi.org/10.1515/abcsb-2015-0022Publisher landing page
- PDF URL
-
https://journals.pan.pl/Content/81858/PDF/03_zhu.pdfDirect link to full text PDF
- Open access
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YesWhether a free full text is available
- OA status
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diamondOpen access status per OpenAlex
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https://journals.pan.pl/Content/81858/PDF/03_zhu.pdfDirect OA link when available
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Phosphorylation, Biology, Protein phosphorylation, Arabidopsis, Complementation, Biochemistry, Signal transduction, Cell biology, Immunoprecipitation, Phosphoproteomics, Transcription factor, Protein kinase A, Mutant, GeneTop concepts (fields/topics) attached by OpenAlex
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5Total citation count in OpenAlex
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2023: 1, 2021: 1, 2018: 1, 2017: 1, 2016: 1Per-year citation counts (last 5 years)
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34Number of works referenced by this work
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10Other works algorithmically related by OpenAlex
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| abstract_inverted_index.to | 96 |
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| abstract_inverted_index.1;1 | 127 |
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| abstract_inverted_index.The | 48 |
| abstract_inverted_index.and | 12, 23, 56, 66, 71, 110, 174, 184, 221, 229 |
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| abstract_inverted_index.for | 217 |
| abstract_inverted_index.its | 222 |
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| abstract_inverted_index.not | 196 |
| abstract_inverted_index.the | 15, 35 |
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| abstract_inverted_index.T446 | 183 |
| abstract_inverted_index.T452 | 155, 185 |
| abstract_inverted_index.T460 | 159 |
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| abstract_inverted_index.rice | 80, 141, 227 |
| abstract_inverted_index.show | 200 |
| abstract_inverted_index.that | 51, 114, 152, 180, 201, 212 |
| abstract_inverted_index.upon | 131 |
| abstract_inverted_index.were | 69, 204 |
| abstract_inverted_index.with | 45, 158, 166 |
| abstract_inverted_index.Among | 82 |
| abstract_inverted_index.Here, | 29 |
| abstract_inverted_index.IDD10 | 120 |
| abstract_inverted_index.LC-MS | 46 |
| abstract_inverted_index.T446, | 139 |
| abstract_inverted_index.Yeast | 163 |
| abstract_inverted_index.after | 74 |
| abstract_inverted_index.assay | 112, 165 |
| abstract_inverted_index.forms | 170 |
| abstract_inverted_index.level | 99 |
| abstract_inverted_index.plant | 10 |
| abstract_inverted_index.their | 191 |
| abstract_inverted_index.using | 34, 106 |
| abstract_inverted_index.which | 8, 226 |
| abstract_inverted_index.while | 190 |
| abstract_inverted_index.31019b | 177 |
| abstract_inverted_index.AMT1;1 | 172, 188 |
| abstract_inverted_index.IDD10, | 86 |
| abstract_inverted_index.factor | 90 |
| abstract_inverted_index.growth | 11, 228 |
| abstract_inverted_index.level. | 122 |
| abstract_inverted_index.levels | 53 |
| abstract_inverted_index.method | 43 |
| abstract_inverted_index.plants | 109 |
| abstract_inverted_index.plasma | 192 |
| abstract_inverted_index.poorly | 27 |
| abstract_inverted_index.reduce | 97 |
| abstract_inverted_index.roots. | 81 |
| abstract_inverted_index.strain | 178 |
| abstract_inverted_index.supply | 118 |
| abstract_inverted_index.uptake | 22, 220 |
| abstract_inverted_index.(T446/D | 173 |
| abstract_inverted_index.AMT1;1. | 162 |
| abstract_inverted_index.Further | 103 |
| abstract_inverted_index.T452/D) | 175 |
| abstract_inverted_index.against | 144 |
| abstract_inverted_index.dioxide | 37 |
| abstract_inverted_index.diverse | 61 |
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| abstract_inverted_index.residue | 143 |
| abstract_inverted_index.results | 49 |
| abstract_inverted_index.studies | 33 |
| abstract_inverted_index.(AMT1;1) | 128 |
| abstract_inverted_index.Abstract | 0 |
| abstract_inverted_index.However, | 14 |
| abstract_inverted_index.N-source | 7 |
| abstract_inverted_index.ammonium | 92, 125, 219 |
| abstract_inverted_index.analyses | 199 |
| abstract_inverted_index.analysis | 105 |
| abstract_inverted_index.aspects, | 62 |
| abstract_inverted_index.changed. | 197 |
| abstract_inverted_index.evidence | 216 |
| abstract_inverted_index.involved | 59 |
| abstract_inverted_index.mediated | 223 |
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| abstract_inverted_index.pathway, | 68 |
| abstract_inverted_index.proteins | 84, 203 |
| abstract_inverted_index.residue. | 102 |
| abstract_inverted_index.residues | 186 |
| abstract_inverted_index.revealed | 179 |
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| abstract_inverted_index.studying | 218 |
| abstract_inverted_index.titanium | 36 |
| abstract_inverted_index.together | 44 |
| abstract_inverted_index.IDD10-GFP | 107 |
| abstract_inverted_index.abolished | 187 |
| abstract_inverted_index.activity, | 189 |
| abstract_inverted_index.analysis. | 47 |
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| abstract_inverted_index.conserved | 157 |
| abstract_inverted_index.decreased | 70 |
| abstract_inverted_index.detected, | 85 |
| abstract_inverted_index.important | 6, 215 |
| abstract_inverted_index.including | 63 |
| abstract_inverted_index.increased | 72, 130 |
| abstract_inverted_index.indicated | 50 |
| abstract_inverted_index.mechanism | 17 |
| abstract_inverted_index.performed | 31 |
| abstract_inverted_index.regulates | 9 |
| abstract_inverted_index.signaling | 25, 67, 224 |
| abstract_inverted_index.transport | 65 |
| abstract_inverted_index.treatment | 78 |
| abstract_inverted_index.)-mediated | 40 |
| abstract_inverted_index.collection | 42 |
| abstract_inverted_index.identified | 95 |
| abstract_inverted_index.regulated. | 232 |
| abstract_inverted_index.signaling, | 93 |
| abstract_inverted_index.transgenic | 108 |
| abstract_inverted_index.treatment. | 135 |
| abstract_inverted_index.underlying | 16 |
| abstract_inverted_index.Arabidopsis | 145, 161 |
| abstract_inverted_index.biochemical | 104 |
| abstract_inverted_index.development | 230 |
| abstract_inverted_index.established | 151 |
| abstract_inverted_index.identified. | 147 |
| abstract_inverted_index.metabolism, | 64 |
| abstract_inverted_index.transporter | 126 |
| abstract_inverted_index.understood. | 28 |
| abstract_inverted_index.development. | 13 |
| abstract_inverted_index.its-mediated | 24 |
| abstract_inverted_index.localization | 194 |
| abstract_inverted_index.phosphomimic | 169 |
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| abstract_inverted_index.transcription | 89 |
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| abstract_inverted_index.transformation | 167 |
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| abstract_inverted_index.complementation | 164 |
| abstract_inverted_index.phosphopeptides | 41 |
| abstract_inverted_index.phosphorylation | 52, 98, 121, 137, 153, 181 |
| abstract_inverted_index.dephosphorylated | 207 |
| abstract_inverted_index.phosphoproteomic | 32 |
| abstract_inverted_index.peptides/proteins | 58 |
| abstract_inverted_index.immunoprecipitation | 111 |
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| cited_by_percentile_year.min | 89 |
| countries_distinct_count | 1 |
| institutions_distinct_count | 4 |
| citation_normalized_percentile.value | 0.87747372 |
| citation_normalized_percentile.is_in_top_1_percent | False |
| citation_normalized_percentile.is_in_top_10_percent | False |