Optogenetic spatial patterning of cooperation in yeast populations Article Swipe
Matthias Le Bec
,
Sylvain Pouzet
,
Céline Cordier
,
Simon Barral
,
Vittore F. Scolari
,
Benoît Sorre
,
Alvaro Banderas
,
Pascal Hersen
·
YOU?
·
· 2023
· Open Access
·
· DOI: https://doi.org/10.1101/2023.05.15.540783
YOU?
·
· 2023
· Open Access
·
· DOI: https://doi.org/10.1101/2023.05.15.540783
Microbial communities are a siege of complex metabolic interactions such as cooperation and competition for resources. Methods to control such interactions could lead to major advances in our ability to engineer microbial consortia for bioproduction and synthetic biology applications. Here, we used optogenetics to control invertase production in yeast, thereby creating landscapes of cooperator and cheater cells. Yeast cells behave as cooperators ( i.e., transform sucrose into glucose, a public “good”) upon blue light illumination or cheaters ( i.e., consume glucose produced by cooperators to grow) in the dark. We show that cooperators benefit best from the hexoses they produce when their domain size is constrained between two cut-off length-scales. From an engineering point of view, the system behaves as a band pass filter. The lower limit is the trace of cheaters’ competition for hexoses, while the upper limit is defined by cooperators’ competition for sucrose. Hence, cooperation mostly occurs at the frontiers with cheater cells, which not only compete for hexoses but also cooperate passively by letting sucrose reach cooperators. We anticipate that this optogenetic method could be applied to shape metabolic interactions in a variety of microbial ecosystems.
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Metadata
- Type
- preprint
- Language
- en
- Landing Page
- https://doi.org/10.1101/2023.05.15.540783
- https://www.biorxiv.org/content/biorxiv/early/2023/05/15/2023.05.15.540783.full.pdf
- OA Status
- green
- References
- 46
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W4376646317
All OpenAlex metadata
Raw OpenAlex JSON
- OpenAlex ID
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https://openalex.org/W4376646317Canonical identifier for this work in OpenAlex
- DOI
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https://doi.org/10.1101/2023.05.15.540783Digital Object Identifier
- Title
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Optogenetic spatial patterning of cooperation in yeast populationsWork title
- Type
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preprintOpenAlex work type
- Language
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enPrimary language
- Publication year
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2023Year of publication
- Publication date
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2023-05-15Full publication date if available
- Authors
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Matthias Le Bec, Sylvain Pouzet, Céline Cordier, Simon Barral, Vittore F. Scolari, Benoît Sorre, Alvaro Banderas, Pascal HersenList of authors in order
- Landing page
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https://doi.org/10.1101/2023.05.15.540783Publisher landing page
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https://www.biorxiv.org/content/biorxiv/early/2023/05/15/2023.05.15.540783.full.pdfDirect link to full text PDF
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YesWhether a free full text is available
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greenOpen access status per OpenAlex
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https://www.biorxiv.org/content/biorxiv/early/2023/05/15/2023.05.15.540783.full.pdfDirect OA link when available
- Concepts
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Bioproduction, Optogenetics, Competition (biology), Yeast, Biology, Synthetic biology, Biochemical engineering, Biotechnology, Ecology, Computational biology, Biochemistry, Neuroscience, EngineeringTop concepts (fields/topics) attached by OpenAlex
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0Total citation count in OpenAlex
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46Number of works referenced by this work
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10Other works algorithmically related by OpenAlex
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