Pangenome Analyses of Pyrus Unravel the Mechanism of Ethylene-Dependent and Ethylene-Independent Fruit Formation Article Swipe
Yinglin Ji
,
Yi Wang
,
Hongju Hu
,
Juntong Jin
,
Hui Yuan
,
Jingguo Zhang
,
Yuqing Wang
,
Mingqian Wang
,
Shaobo Yin
,
Shijiao Lin
,
Yuling Liang
,
Shipeng Wei
,
Weiting Liu
,
Bin Li
,
Aide Wang
·
YOU?
·
· 2024
· Open Access
·
· DOI: https://doi.org/10.21203/rs.3.rs-4335763/v1
YOU?
·
· 2024
· Open Access
·
· DOI: https://doi.org/10.21203/rs.3.rs-4335763/v1
Fleshy fruits are classified as ethylene dependent or ethylene independent according to the ethylene production rate at the onset of ripening. However, the mechanism regulating ethylene production in fruits is unclear. Pears (Pyrus spp.) contain both types of fruits. Analyses of 5 Pyrus genomes and 109 resequenced pear accessions revealed an important chromosomal locus closely associated with ethylene-producing phenotype. This locus was closely linked to a novel long noncoding RNA (lncRNA). Interestingly, the expression of this lncRNA showed an opposite pattern to ethylene production. Fruits overexpressing this lncRNA displayed extremely low ethylene production and a late ripening phenotype, which was observed for both tomatoes and pears. Therefore, this lncRNA was termed Ethylene Inhibiting Factor (EIF). Variable deletions of 3.8 kb and 1.1 kb regions altered EIF expression and enabled the categorization of pears into six genotypes. The huge number of transposable elements (TEs) were observed and they probably drove fragment rearrangement, generating the EIF, which repressed the ethylene production, resulting in ethylene-independent pear fruit. These findings provide new insights into the molecular basis of ethylene-producing phenotype in Maloideae fruits.
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- Type
- preprint
- Language
- en
- Landing Page
- https://doi.org/10.21203/rs.3.rs-4335763/v1
- https://www.researchsquare.com/article/rs-4335763/latest.pdf
- OA Status
- green
- References
- 56
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W4396730801
All OpenAlex metadata
Raw OpenAlex JSON
- OpenAlex ID
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https://openalex.org/W4396730801Canonical identifier for this work in OpenAlex
- DOI
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https://doi.org/10.21203/rs.3.rs-4335763/v1Digital Object Identifier
- Title
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Pangenome Analyses of Pyrus Unravel the Mechanism of Ethylene-Dependent and Ethylene-Independent Fruit FormationWork title
- Type
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preprintOpenAlex work type
- Language
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enPrimary language
- Publication year
-
2024Year of publication
- Publication date
-
2024-05-08Full publication date if available
- Authors
-
Yinglin Ji, Yi Wang, Hongju Hu, Juntong Jin, Hui Yuan, Jingguo Zhang, Yuqing Wang, Mingqian Wang, Shaobo Yin, Shijiao Lin, Yuling Liang, Shipeng Wei, Weiting Liu, Bin Li, Aide WangList of authors in order
- Landing page
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https://doi.org/10.21203/rs.3.rs-4335763/v1Publisher landing page
- PDF URL
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https://www.researchsquare.com/article/rs-4335763/latest.pdfDirect link to full text PDF
- Open access
-
YesWhether a free full text is available
- OA status
-
greenOpen access status per OpenAlex
- OA URL
-
https://www.researchsquare.com/article/rs-4335763/latest.pdfDirect OA link when available
- Concepts
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Ethylene, Mechanism (biology), Horticulture, Botany, Chemistry, Biology, Biochemistry, Physics, Catalysis, Quantum mechanicsTop concepts (fields/topics) attached by OpenAlex
- Cited by
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0Total citation count in OpenAlex
- References (count)
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56Number of works referenced by this work
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10Other works algorithmically related by OpenAlex
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