PPNet: Identifying Functional Association Networks by Phylogenetic Profiling of Prokaryotic Genomes Article Swipe
Related Concepts
Phylogenetic tree
Computational biology
Biology
Genome
Similarity (geometry)
Genetics
Data mining
Computer science
Gene
Artificial intelligence
Image (mathematics)
Yangjie Li
,
Bin Ma
,
Kexin Hua
,
Huimin Gong
,
Rong‐Rong He
,
Rui Luo
,
Dingren Bi
,
Rui Zhou
,
Paul R. Langford
,
Hui Jin
·
YOU?
·
· 2023
· Open Access
·
· DOI: https://doi.org/10.1128/spectrum.03871-22
· OA: W4313544512
YOU?
·
· 2023
· Open Access
·
· DOI: https://doi.org/10.1128/spectrum.03871-22
· OA: W4313544512
This study developed PPNet, the first tool that can be used to infer large-scale bacterial functional association networks of a single species. PPNet includes a method for assigning the uniqueness of a bacterial strain using the average nucleotide identity and the average nucleotide coverage.
Related Topics
Finding more related topics…