Quantification of the molar concentration of the NGS libraries by qPCR v1 Article Swipe
Yoko Kato‐Unoki
·
YOU?
·
· 2020
· Open Access
·
· DOI: https://doi.org/10.17504/protocols.io.bmgck3sw
YOU?
·
· 2020
· Open Access
·
· DOI: https://doi.org/10.17504/protocols.io.bmgck3sw
Using the NGS library concentration obtained from the Agilent BioAnalyzer, dilute the libraries to 100 pg/μl with 10 mM Tris-HCl, pH 8.0.Then prepare a 1:10000 dilution of each diluted library (final concentration, 0.01 pg/μl) by conducting 10-fold dilution series using 10 mM Tris-HCl, pH 8.0.*If the library concentration is unknown, conduct a 10-fold dilution series to achieve an appropriate final dilution (Note: for a 1:3 diluted library, we conducted a 1:500,000 dilution with 10 mM Tris-HCl, pH 8.0).
Related Topics
Metadata
- Type
- preprint
- Language
- en
- Landing Page
- https://doi.org/10.17504/protocols.io.bmgck3sw
- https://www.protocols.io/view/quantification-of-the-molar-concentration-of-the-n-bmgck3sw.pdf
- OA Status
- gold
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W3135174206
All OpenAlex metadata
Raw OpenAlex JSON
- OpenAlex ID
-
https://openalex.org/W3135174206Canonical identifier for this work in OpenAlex
- DOI
-
https://doi.org/10.17504/protocols.io.bmgck3swDigital Object Identifier
- Title
-
Quantification of the molar concentration of the NGS libraries by qPCR v1Work title
- Type
-
preprintOpenAlex work type
- Language
-
enPrimary language
- Publication year
-
2020Year of publication
- Publication date
-
2020-09-17Full publication date if available
- Authors
-
Yoko Kato‐UnokiList of authors in order
- Landing page
-
https://doi.org/10.17504/protocols.io.bmgck3swPublisher landing page
- PDF URL
-
https://www.protocols.io/view/quantification-of-the-molar-concentration-of-the-n-bmgck3sw.pdfDirect link to full text PDF
- Open access
-
YesWhether a free full text is available
- OA status
-
goldOpen access status per OpenAlex
- OA URL
-
https://www.protocols.io/view/quantification-of-the-molar-concentration-of-the-n-bmgck3sw.pdfDirect OA link when available
- Concepts
-
Molar, Chemistry, Computational biology, Chromatography, Biology, PaleontologyTop concepts (fields/topics) attached by OpenAlex
- Cited by
-
0Total citation count in OpenAlex
- Related works (count)
-
10Other works algorithmically related by OpenAlex
Full payload
| id | https://openalex.org/W3135174206 |
|---|---|
| doi | https://doi.org/10.17504/protocols.io.bmgck3sw |
| ids.doi | https://doi.org/10.17504/protocols.io.bmgck3sw |
| ids.mag | 3135174206 |
| ids.openalex | https://openalex.org/W3135174206 |
| fwci | 0.0 |
| type | preprint |
| title | Quantification of the molar concentration of the NGS libraries by qPCR v1 |
| biblio.issue | |
| biblio.volume | |
| biblio.last_page | |
| biblio.first_page | |
| topics[0].id | https://openalex.org/T12613 |
| topics[0].field.id | https://openalex.org/fields/25 |
| topics[0].field.display_name | Materials Science |
| topics[0].score | 0.8108000159263611 |
| topics[0].domain.id | https://openalex.org/domains/3 |
| topics[0].domain.display_name | Physical Sciences |
| topics[0].subfield.id | https://openalex.org/subfields/2505 |
| topics[0].subfield.display_name | Materials Chemistry |
| topics[0].display_name | X-ray Diffraction in Crystallography |
| is_xpac | False |
| apc_list | |
| apc_paid | |
| concepts[0].id | https://openalex.org/C202271784 |
| concepts[0].level | 2 |
| concepts[0].score | 0.5684757232666016 |
| concepts[0].wikidata | https://www.wikidata.org/wiki/Q189218 |
| concepts[0].display_name | Molar |
| concepts[1].id | https://openalex.org/C185592680 |
| concepts[1].level | 0 |
| concepts[1].score | 0.47133445739746094 |
| concepts[1].wikidata | https://www.wikidata.org/wiki/Q2329 |
| concepts[1].display_name | Chemistry |
| concepts[2].id | https://openalex.org/C70721500 |
| concepts[2].level | 1 |
| concepts[2].score | 0.3926451802253723 |
| concepts[2].wikidata | https://www.wikidata.org/wiki/Q177005 |
| concepts[2].display_name | Computational biology |
| concepts[3].id | https://openalex.org/C43617362 |
| concepts[3].level | 1 |
| concepts[3].score | 0.32494646310806274 |
| concepts[3].wikidata | https://www.wikidata.org/wiki/Q170050 |
| concepts[3].display_name | Chromatography |
| concepts[4].id | https://openalex.org/C86803240 |
| concepts[4].level | 0 |
| concepts[4].score | 0.272605299949646 |
| concepts[4].wikidata | https://www.wikidata.org/wiki/Q420 |
| concepts[4].display_name | Biology |
| concepts[5].id | https://openalex.org/C151730666 |
| concepts[5].level | 1 |
| concepts[5].score | 0.1018630862236023 |
| concepts[5].wikidata | https://www.wikidata.org/wiki/Q7205 |
| concepts[5].display_name | Paleontology |
| keywords[0].id | https://openalex.org/keywords/molar |
| keywords[0].score | 0.5684757232666016 |
| keywords[0].display_name | Molar |
| keywords[1].id | https://openalex.org/keywords/chemistry |
| keywords[1].score | 0.47133445739746094 |
| keywords[1].display_name | Chemistry |
| keywords[2].id | https://openalex.org/keywords/computational-biology |
| keywords[2].score | 0.3926451802253723 |
| keywords[2].display_name | Computational biology |
| keywords[3].id | https://openalex.org/keywords/chromatography |
| keywords[3].score | 0.32494646310806274 |
| keywords[3].display_name | Chromatography |
| keywords[4].id | https://openalex.org/keywords/biology |
| keywords[4].score | 0.272605299949646 |
| keywords[4].display_name | Biology |
| keywords[5].id | https://openalex.org/keywords/paleontology |
| keywords[5].score | 0.1018630862236023 |
| keywords[5].display_name | Paleontology |
| language | en |
| locations[0].id | doi:10.17504/protocols.io.bmgck3sw |
| locations[0].is_oa | True |
| locations[0].source | |
| locations[0].license | cc-by |
| locations[0].pdf_url | https://www.protocols.io/view/quantification-of-the-molar-concentration-of-the-n-bmgck3sw.pdf |
| locations[0].version | acceptedVersion |
| locations[0].raw_type | posted-content |
| locations[0].license_id | https://openalex.org/licenses/cc-by |
| locations[0].is_accepted | True |
| locations[0].is_published | False |
| locations[0].raw_source_name | |
| locations[0].landing_page_url | https://doi.org/10.17504/protocols.io.bmgck3sw |
| indexed_in | crossref |
| authorships[0].author.id | https://openalex.org/A5112554117 |
| authorships[0].author.orcid | |
| authorships[0].author.display_name | Yoko Kato‐Unoki |
| authorships[0].author_position | first |
| authorships[0].raw_author_name | Yoko Kato-Unoki |
| authorships[0].is_corresponding | True |
| has_content.pdf | True |
| has_content.grobid_xml | True |
| is_paratext | False |
| open_access.is_oa | True |
| open_access.oa_url | https://www.protocols.io/view/quantification-of-the-molar-concentration-of-the-n-bmgck3sw.pdf |
| open_access.oa_status | gold |
| open_access.any_repository_has_fulltext | False |
| created_date | 2025-10-10T00:00:00 |
| display_name | Quantification of the molar concentration of the NGS libraries by qPCR v1 |
| has_fulltext | True |
| is_retracted | False |
| updated_date | 2025-11-06T03:46:38.306776 |
| primary_topic.id | https://openalex.org/T12613 |
| primary_topic.field.id | https://openalex.org/fields/25 |
| primary_topic.field.display_name | Materials Science |
| primary_topic.score | 0.8108000159263611 |
| primary_topic.domain.id | https://openalex.org/domains/3 |
| primary_topic.domain.display_name | Physical Sciences |
| primary_topic.subfield.id | https://openalex.org/subfields/2505 |
| primary_topic.subfield.display_name | Materials Chemistry |
| primary_topic.display_name | X-ray Diffraction in Crystallography |
| related_works | https://openalex.org/W4387497383, https://openalex.org/W2948807893, https://openalex.org/W2899084033, https://openalex.org/W2778153218, https://openalex.org/W2748952813, https://openalex.org/W1531601525, https://openalex.org/W2607424097, https://openalex.org/W2606230654, https://openalex.org/W2319480705, https://openalex.org/W2398689458 |
| cited_by_count | 0 |
| locations_count | 1 |
| best_oa_location.id | doi:10.17504/protocols.io.bmgck3sw |
| best_oa_location.is_oa | True |
| best_oa_location.source | |
| best_oa_location.license | cc-by |
| best_oa_location.pdf_url | https://www.protocols.io/view/quantification-of-the-molar-concentration-of-the-n-bmgck3sw.pdf |
| best_oa_location.version | acceptedVersion |
| best_oa_location.raw_type | posted-content |
| best_oa_location.license_id | https://openalex.org/licenses/cc-by |
| best_oa_location.is_accepted | True |
| best_oa_location.is_published | False |
| best_oa_location.raw_source_name | |
| best_oa_location.landing_page_url | https://doi.org/10.17504/protocols.io.bmgck3sw |
| primary_location.id | doi:10.17504/protocols.io.bmgck3sw |
| primary_location.is_oa | True |
| primary_location.source | |
| primary_location.license | cc-by |
| primary_location.pdf_url | https://www.protocols.io/view/quantification-of-the-molar-concentration-of-the-n-bmgck3sw.pdf |
| primary_location.version | acceptedVersion |
| primary_location.raw_type | posted-content |
| primary_location.license_id | https://openalex.org/licenses/cc-by |
| primary_location.is_accepted | True |
| primary_location.is_published | False |
| primary_location.raw_source_name | |
| primary_location.landing_page_url | https://doi.org/10.17504/protocols.io.bmgck3sw |
| publication_date | 2020-09-17 |
| publication_year | 2020 |
| referenced_works_count | 0 |
| abstract_inverted_index.a | 23, 51, 63, 69 |
| abstract_inverted_index.10 | 17, 40, 73 |
| abstract_inverted_index.an | 57 |
| abstract_inverted_index.by | 34 |
| abstract_inverted_index.is | 48 |
| abstract_inverted_index.mM | 18, 41, 74 |
| abstract_inverted_index.of | 26 |
| abstract_inverted_index.pH | 20, 43, 76 |
| abstract_inverted_index.to | 13, 55 |
| abstract_inverted_index.we | 67 |
| abstract_inverted_index.100 | 14 |
| abstract_inverted_index.1:3 | 64 |
| abstract_inverted_index.NGS | 2 |
| abstract_inverted_index.for | 62 |
| abstract_inverted_index.the | 1, 7, 11, 45 |
| abstract_inverted_index.0.01 | 32 |
| abstract_inverted_index.each | 27 |
| abstract_inverted_index.from | 6 |
| abstract_inverted_index.with | 16, 72 |
| abstract_inverted_index.8.0). | 77 |
| abstract_inverted_index.Using | 0 |
| abstract_inverted_index.final | 59 |
| abstract_inverted_index.using | 39 |
| abstract_inverted_index.(Note: | 61 |
| abstract_inverted_index.(final | 30 |
| abstract_inverted_index.dilute | 10 |
| abstract_inverted_index.pg/μl | 15 |
| abstract_inverted_index.series | 38, 54 |
| abstract_inverted_index.10-fold | 36, 52 |
| abstract_inverted_index.1:10000 | 24 |
| abstract_inverted_index.8.0.*If | 44 |
| abstract_inverted_index.Agilent | 8 |
| abstract_inverted_index.achieve | 56 |
| abstract_inverted_index.conduct | 50 |
| abstract_inverted_index.diluted | 28, 65 |
| abstract_inverted_index.library | 3, 29, 46 |
| abstract_inverted_index.pg/μl) | 33 |
| abstract_inverted_index.prepare | 22 |
| abstract_inverted_index.8.0.Then | 21 |
| abstract_inverted_index.dilution | 25, 37, 53, 60, 71 |
| abstract_inverted_index.library, | 66 |
| abstract_inverted_index.obtained | 5 |
| abstract_inverted_index.unknown, | 49 |
| abstract_inverted_index.1:500,000 | 70 |
| abstract_inverted_index.Tris-HCl, | 19, 42, 75 |
| abstract_inverted_index.conducted | 68 |
| abstract_inverted_index.libraries | 12 |
| abstract_inverted_index.conducting | 35 |
| abstract_inverted_index.appropriate | 58 |
| abstract_inverted_index.BioAnalyzer, | 9 |
| abstract_inverted_index.concentration | 4, 47 |
| abstract_inverted_index.concentration, | 31 |
| cited_by_percentile_year | |
| corresponding_author_ids | https://openalex.org/A5112554117 |
| countries_distinct_count | 0 |
| institutions_distinct_count | 1 |
| citation_normalized_percentile.value | 0.13056428 |
| citation_normalized_percentile.is_in_top_1_percent | False |
| citation_normalized_percentile.is_in_top_10_percent | False |