UV‐B signalling in rice: Response identification, gene expression profiling and mutant isolation
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· 2020
· Open Access
·
· DOI: https://doi.org/10.1111/pce.13988
Responses of rice seedlings to UV‐B radiation (UV‐B) were investigated, aiming to establish rice as a model plant for UV‐B signalling studies. The growth of japonica rice coleoptiles, grown under red light, was inhibited by brief irradiation with UV‐B, but not with blue light. The effective UV‐B fluences (10 −1 ‐10 3 μmol m −2 ) were much lower than those reported in Arabidopsis. The response was much less in indica rice cultivars and its extent varied among Oryza species. We next identified UV‐B‐specific anthocyanin accumulation in the first leaf of purple rice and used this visible phenotype to isolate mutants. Some isolated mutants were further characterized, and one was found to have a defect in the growth response. Using microarrays, we identified a number of genes that are regulated by low‐fluence‐rate UV‐B in japonica coleoptiles. Some up‐regulated genes were analysed by real‐time PCR for UV‐B specificity and the difference between japonica and indica . More than 70% of UV‐B‐regulated rice genes had no homologs in UV‐B‐regulated Arabidopsis genes. Many UV‐B‐regulated rice genes are related to plant hormones and especially to jasmonate biosynthetic and responsive genes in apparent agreement with the growth response. Possible involvement of two rice homologs of UVR8, a UV‐B photoreceptor, is discussed.
Related Topics
- Type
- article
- Language
- en
- Landing Page
- https://doi.org/10.1111/pce.13988
- https://onlinelibrary.wiley.com/doi/pdfdirect/10.1111/pce.13988
- OA Status
- bronze
- Cited By
- 13
- References
- 123
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W3117951550
Raw OpenAlex JSON
- OpenAlex ID
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https://openalex.org/W3117951550Canonical identifier for this work in OpenAlex
- DOI
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https://doi.org/10.1111/pce.13988Digital Object Identifier
- Title
-
UV‐B signalling in rice: Response identification, gene expression profiling and mutant isolationWork title - Type
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articleOpenAlex work type
- Language
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enPrimary language
- Publication year
-
2020Year of publication
- Publication date
-
2020-12-30Full publication date if available
- Authors
-
M. Idris, Nobu Seo, Lei Jiang, Seiichiro Kiyota, Jun Hidema, Moritoshi IinoList of authors in order
- Landing page
-
https://doi.org/10.1111/pce.13988Publisher landing page
- PDF URL
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https://onlinelibrary.wiley.com/doi/pdfdirect/10.1111/pce.13988Direct link to full text PDF
- Open access
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YesWhether a free full text is available
- OA status
-
bronzeOpen access status per OpenAlex
- OA URL
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https://onlinelibrary.wiley.com/doi/pdfdirect/10.1111/pce.13988Direct OA link when available
- Concepts
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Mutant, Gene, Gene expression profiling, Biology, Identification (biology), Signalling, Profiling (computer programming), Isolation (microbiology), Signalling pathways, Gene expression, Computational biology, Genetics, Molecular biology, Cell biology, Bioinformatics, Computer science, Botany, Operating systemTop concepts (fields/topics) attached by OpenAlex
- Cited by
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13Total citation count in OpenAlex
- Citations by year (recent)
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2025: 5, 2024: 5, 2023: 1, 2022: 2Per-year citation counts (last 5 years)
- References (count)
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123Number of works referenced by this work
- Related works (count)
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10Other works algorithmically related by OpenAlex
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| abstract_inverted_index.Arabidopsis | 168 |
| abstract_inverted_index.anthocyanin | 85 |
| abstract_inverted_index.involvement | 195 |
| abstract_inverted_index.irradiation | 37 |
| abstract_inverted_index.real‐time | 143 |
| abstract_inverted_index.specificity | 147 |
| abstract_inverted_index.Arabidopsis. | 64 |
| abstract_inverted_index.accumulation | 86 |
| abstract_inverted_index.biosynthetic | 183 |
| abstract_inverted_index.coleoptiles, | 28 |
| abstract_inverted_index.coleoptiles. | 136 |
| abstract_inverted_index.microarrays, | 121 |
| abstract_inverted_index.investigated, | 10 |
| abstract_inverted_index.characterized, | 107 |
| abstract_inverted_index.photoreceptor, | 204 |
| abstract_inverted_index.up‐regulated | 138 |
| abstract_inverted_index.UV‐B‐specific | 84 |
| abstract_inverted_index.UV‐B‐regulated | 160, 167, 171 |
| abstract_inverted_index.low‐fluence‐rate | 132 |
| cited_by_percentile_year.max | 98 |
| cited_by_percentile_year.min | 89 |
| corresponding_author_ids | https://openalex.org/A5031480833 |
| countries_distinct_count | 1 |
| institutions_distinct_count | 6 |
| corresponding_institution_ids | https://openalex.org/I317356780 |
| citation_normalized_percentile.value | 0.79595913 |
| citation_normalized_percentile.is_in_top_1_percent | False |
| citation_normalized_percentile.is_in_top_10_percent | False |