Soil aggregates by design: Manufactured aggregates with defined microbial composition for interrogating microbial activities in soil microhabitats Article Swipe
Harry J. Harvey
,
Ricky D. Wildman
,
Sacha J. Mooney
,
Simon V. Avery
·
YOU?
·
· 2020
· Open Access
·
· DOI: https://doi.org/10.1016/j.soilbio.2020.107870
YOU?
·
· 2020
· Open Access
·
· DOI: https://doi.org/10.1016/j.soilbio.2020.107870
Differences in the structure of microbial communities are reported to exist between the inside and outside of soil aggregates, but the impacts of soil aggregation on microbial activity in soils, essential for soil health, have proven difficult to study in a controlled manner. We have developed a new method to manufacture soil macroaggregates in the laboratory with the ability to introduce microorganisms of choice to the endo- or exo-aggregate environments, offering new avenues for experimental research. X-ray Computed Tomography imaging confirmed the manufactured aggregates had similar overall porosity, pore size and pore connectivity to naturally-formed aggregates. We exploited this new approach to test the hypothesis that microorganisms within aggregates are protected from environmental stresses, in comparison to organisms located near aggregate surfaces. Soil isolates of yeasts introduced to the interior or exterior of manufactured soil aggregates showed no significant difference in the survival of metal- or anoxic-stresses, but organisms within aggregates were protected from heat stress in a time-dependent manner. The results indicate that microbial communities may be protected from particular environmental perturbations by the complex porous architecture that arises from the aggregated soil structure, and underscore the value of this new approach for improving our understanding of the interactions between the soil physical environment and the associated soil biology.
Related Topics
Concepts
Microorganism
Porosity
Soil science
Soil structure
Aggregate (composite)
Soil water
Environmental science
Bulk soil
Soil biology
Soil ecology
Ecology
Geology
Soil organic matter
Biology
Soil biodiversity
Materials science
Geotechnical engineering
Bacteria
Nanotechnology
Paleontology
Metadata
- Type
- article
- Language
- en
- Landing Page
- https://doi.org/10.1016/j.soilbio.2020.107870
- https://ars.els-cdn.com/content/image/1-s2.0-S003807172030167X-fx1_lrg.jpg
- OA Status
- hybrid
- Cited By
- 30
- References
- 33
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W3033512914
All OpenAlex metadata
Raw OpenAlex JSON
- OpenAlex ID
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https://openalex.org/W3033512914Canonical identifier for this work in OpenAlex
- DOI
-
https://doi.org/10.1016/j.soilbio.2020.107870Digital Object Identifier
- Title
-
Soil aggregates by design: Manufactured aggregates with defined microbial composition for interrogating microbial activities in soil microhabitatsWork title
- Type
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articleOpenAlex work type
- Language
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enPrimary language
- Publication year
-
2020Year of publication
- Publication date
-
2020-06-04Full publication date if available
- Authors
-
Harry J. Harvey, Ricky D. Wildman, Sacha J. Mooney, Simon V. AveryList of authors in order
- Landing page
-
https://doi.org/10.1016/j.soilbio.2020.107870Publisher landing page
- PDF URL
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https://ars.els-cdn.com/content/image/1-s2.0-S003807172030167X-fx1_lrg.jpgDirect link to full text PDF
- Open access
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YesWhether a free full text is available
- OA status
-
hybridOpen access status per OpenAlex
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https://ars.els-cdn.com/content/image/1-s2.0-S003807172030167X-fx1_lrg.jpgDirect OA link when available
- Concepts
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Microorganism, Porosity, Soil science, Soil structure, Aggregate (composite), Soil water, Environmental science, Bulk soil, Soil biology, Soil ecology, Ecology, Geology, Soil organic matter, Biology, Soil biodiversity, Materials science, Geotechnical engineering, Bacteria, Nanotechnology, PaleontologyTop concepts (fields/topics) attached by OpenAlex
- Cited by
-
30Total citation count in OpenAlex
- Citations by year (recent)
-
2025: 6, 2024: 2, 2023: 11, 2022: 6, 2021: 3Per-year citation counts (last 5 years)
- References (count)
-
33Number of works referenced by this work
- Related works (count)
-
10Other works algorithmically related by OpenAlex
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