Spontaneous formation, gene regulation of Trichoderma and slow decomposition in cocopeat Article Swipe
Avinash Sharma
,
Mainu Hazarika
,
Punabati Heisnam
,
Himanshu Pandey
,
V.S. Devadas
,
Praveen Kumar
,
Devendra Narain Singh
,
Amit Vashishth
,
Monoj Sutradhar
,
Rani Jha
·
YOU?
·
· 2024
· Open Access
·
· DOI: https://doi.org/10.1016/j.nxsust.2024.100051
YOU?
·
· 2024
· Open Access
·
· DOI: https://doi.org/10.1016/j.nxsust.2024.100051
Cocopeat has various distinguishing properties that encourage the slow decomposition and spontaneous Trichoderma growth. The cocopeat synthesizes responsive chemicals and regulatory mechanisms which assist in the Trichoderma growth. The exact chemical stimulant and efficient mechanisms governing the spontaneous Trichoderma growth in cocopeat remain unknown. The high lignin and cellulose concentration produces actinomycetes and deuteromycetes, which trigger slow decomposition in cocopeat. The chemical components, temperature, pH, nutrients, and aeration all have a direct impact Trichoderma growth and slow decomposition. The chemical constituents lignin, suberin, cutin, pectin, cellulose, and hemicellulose are analyzed with sodium hydroxide solution and examined using scanning electron microscopy (SEM), energy dispersive x-ray spectroscopy (EDAX), fourier transform infrared (FTIR) spectra, x-ray diffraction (XRD), and thermogravimetry. The decomposition dynamics are determined using a mettler thermogravimetric analyzer. Simultaneously thermogravimetry and differential scanning calorimetry are used to examine the stages of decomposition. The decomposition reactions are investigated using the distributed active energy model (DAEM). The glucose Murashige and Skoog (MS) media, chitin Murashige and Skoog (MS) media, Murashige and Skoog (MS) basal media, high-density oligonucleotide microarray, expressed sequence tag-based transcript and Blast2GO suite, hierarchical clustering and heat representation are involved in examination of Trichoderma species. The Upside regulating genes respond to signal transduction, transcription, translation, post-translational modification, and protein folding with the signal transcription factor Pac1 (PacC) for Trichoderma species growth. The dye decolorization assay, genome-wide gene family evolutionary analysis, and whole-genome sequencing were used to discover prospective genes for detecting high or slow decomposition in fungi. The methodologies and technology have the potential to investigate Trichoderma type, response chemicals, and mechanisms underlying Trichoderma growth and slow decomposition in cocopeat.
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Metadata
- Type
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- Language
- en
- Landing Page
- https://doi.org/10.1016/j.nxsust.2024.100051
- OA Status
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- References
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All OpenAlex metadata
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https://openalex.org/W4399662992Canonical identifier for this work in OpenAlex
- DOI
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https://doi.org/10.1016/j.nxsust.2024.100051Digital Object Identifier
- Title
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Spontaneous formation, gene regulation of Trichoderma and slow decomposition in cocopeatWork title
- Type
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articleOpenAlex work type
- Language
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enPrimary language
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2024Year of publication
- Publication date
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2024-01-01Full publication date if available
- Authors
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Avinash Sharma, Mainu Hazarika, Punabati Heisnam, Himanshu Pandey, V.S. Devadas, Praveen Kumar, Devendra Narain Singh, Amit Vashishth, Monoj Sutradhar, Rani JhaList of authors in order
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YesWhether a free full text is available
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diamondOpen access status per OpenAlex
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https://doi.org/10.1016/j.nxsust.2024.100051Direct OA link when available
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Decomposition, Trichoderma, Horticulture, Biology, EcologyTop concepts (fields/topics) attached by OpenAlex
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0Total citation count in OpenAlex
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| abstract_inverted_index.examined | 95 |
| abstract_inverted_index.infrared | 108 |
| abstract_inverted_index.involved | 187 |
| abstract_inverted_index.produces | 50 |
| abstract_inverted_index.response | 256 |
| abstract_inverted_index.scanning | 97, 130 |
| abstract_inverted_index.sequence | 175 |
| abstract_inverted_index.solution | 93 |
| abstract_inverted_index.species. | 192 |
| abstract_inverted_index.spectra, | 110 |
| abstract_inverted_index.suberin, | 82 |
| abstract_inverted_index.unknown. | 43 |
| abstract_inverted_index.Murashige | 154, 160, 165 |
| abstract_inverted_index.analysis, | 227 |
| abstract_inverted_index.analyzer. | 125 |
| abstract_inverted_index.cellulose | 48 |
| abstract_inverted_index.chemicals | 18 |
| abstract_inverted_index.cocopeat. | 59, 267 |
| abstract_inverted_index.detecting | 238 |
| abstract_inverted_index.efficient | 33 |
| abstract_inverted_index.encourage | 6 |
| abstract_inverted_index.expressed | 174 |
| abstract_inverted_index.governing | 35 |
| abstract_inverted_index.hydroxide | 92 |
| abstract_inverted_index.potential | 251 |
| abstract_inverted_index.reactions | 142 |
| abstract_inverted_index.stimulant | 31 |
| abstract_inverted_index.tag-based | 176 |
| abstract_inverted_index.transform | 107 |
| abstract_inverted_index.cellulose, | 85 |
| abstract_inverted_index.chemicals, | 257 |
| abstract_inverted_index.clustering | 182 |
| abstract_inverted_index.determined | 120 |
| abstract_inverted_index.dispersive | 102 |
| abstract_inverted_index.mechanisms | 21, 34, 259 |
| abstract_inverted_index.microscopy | 99 |
| abstract_inverted_index.nutrients, | 65 |
| abstract_inverted_index.properties | 4 |
| abstract_inverted_index.regulating | 195 |
| abstract_inverted_index.regulatory | 20 |
| abstract_inverted_index.responsive | 17 |
| abstract_inverted_index.sequencing | 230 |
| abstract_inverted_index.technology | 248 |
| abstract_inverted_index.transcript | 177 |
| abstract_inverted_index.underlying | 260 |
| abstract_inverted_index.Trichoderma | 12, 26, 38, 73, 191, 216, 254, 261 |
| abstract_inverted_index.calorimetry | 131 |
| abstract_inverted_index.components, | 62 |
| abstract_inverted_index.diffraction | 112 |
| abstract_inverted_index.distributed | 147 |
| abstract_inverted_index.examination | 189 |
| abstract_inverted_index.genome-wide | 223 |
| abstract_inverted_index.investigate | 253 |
| abstract_inverted_index.microarray, | 173 |
| abstract_inverted_index.prospective | 235 |
| abstract_inverted_index.spontaneous | 11, 37 |
| abstract_inverted_index.synthesizes | 16 |
| abstract_inverted_index.constituents | 80 |
| abstract_inverted_index.differential | 129 |
| abstract_inverted_index.evolutionary | 226 |
| abstract_inverted_index.hierarchical | 181 |
| abstract_inverted_index.high-density | 171 |
| abstract_inverted_index.investigated | 144 |
| abstract_inverted_index.spectroscopy | 104 |
| abstract_inverted_index.temperature, | 63 |
| abstract_inverted_index.translation, | 202 |
| abstract_inverted_index.whole-genome | 229 |
| abstract_inverted_index.actinomycetes | 51 |
| abstract_inverted_index.concentration | 49 |
| abstract_inverted_index.decomposition | 9, 57, 117, 141, 242, 265 |
| abstract_inverted_index.hemicellulose | 87 |
| abstract_inverted_index.methodologies | 246 |
| abstract_inverted_index.modification, | 204 |
| abstract_inverted_index.transcription | 211 |
| abstract_inverted_index.transduction, | 200 |
| abstract_inverted_index.Simultaneously | 126 |
| abstract_inverted_index.decolorization | 221 |
| abstract_inverted_index.decomposition. | 77, 139 |
| abstract_inverted_index.distinguishing | 3 |
| abstract_inverted_index.representation | 185 |
| abstract_inverted_index.transcription, | 201 |
| abstract_inverted_index.deuteromycetes, | 53 |
| abstract_inverted_index.oligonucleotide | 172 |
| abstract_inverted_index.thermogravimetry | 127 |
| abstract_inverted_index.thermogravimetric | 124 |
| abstract_inverted_index.thermogravimetry. | 115 |
| abstract_inverted_index.post-translational | 203 |
| cited_by_percentile_year | |
| countries_distinct_count | 0 |
| institutions_distinct_count | 10 |
| sustainable_development_goals[0].id | https://metadata.un.org/sdg/2 |
| sustainable_development_goals[0].score | 0.7300000190734863 |
| sustainable_development_goals[0].display_name | Zero hunger |
| citation_normalized_percentile.value | 0.05866251 |
| citation_normalized_percentile.is_in_top_1_percent | False |
| citation_normalized_percentile.is_in_top_10_percent | False |