Standardized annotation of translated open reading frames Article Swipe
Jonathan M. Mudge
,
Jorge Ruiz‐Orera
,
John R. Prensner
,
Marie A. Brunet
,
Ferriol Calvet
,
Irwin Jungreis
,
José M. González
,
Michele Magrane
,
Thomas F. Martínez
,
Jana Felicitas Schulz
,
Yucheng Yang
,
M. Mar Albà
,
Julie L. Aspden
,
Pavel V. Baranov
,
Ariel Bazzini
,
Elspeth A. Bruford
,
María Martín
,
Lorenzo Calviello
,
Anne‐Ruxandra Carvunis
,
Jin Chen
,
Juan Pablo Couso
,
Eric W. Deutsch
,
Paul Flicek
,
Adam Frankish
,
Mark Gerstein
,
Norbert Hübner
,
Nicholas T. Ingolia
,
Manolis Kellis
,
Gerben Menschaert
,
Robert L. Moritz
,
Uwe Ohler
,
Xavier Roucou
,
Alan Saghatelian
,
Jonathan S. Weissman
,
Sebastiaan van Heesch
·
YOU?
·
· 2022
· Open Access
·
· DOI: https://doi.org/10.1038/s41587-022-01369-0
YOU?
·
· 2022
· Open Access
·
· DOI: https://doi.org/10.1038/s41587-022-01369-0
Ribosome profiling (Ribo-seq) has extended our understanding of the translational ‘vocabulary’ of the human genome, uncovering thousands of open reading frames (ORFs) within long noncoding RNAs (lncRNAs) and presumed untranslated regions (UTRs) of protein-coding genes. However, reference gene annotation projects have been circumspect in their incorporation of these ORFs because of uncertainties about their experimental reproducibility and physiological roles. Yet, it is clear that certain ‘Ribo-seq ORFs’ make stable proteins, others mediate gene regulation, and many have medical implications. Ultimately, the absence of standardized ORF annotation has created a circular problem: while Ribo-seq ORFs remain unrecognized by reference annotation databases, this lack of recognition will thwart studies examining their roles. Here, we outline a community-led effort involving Ensembl/GENCODE, the HUGO Gene Nomenclature Committee (HGNC), UniProtKB, HUPO/HPP and PeptideAtlas to produce a standardized catalog of 7,264 human Ribo-seq ORFs; a path to bring protein-level evidence for Ribo-seq ORFs into reference annotation databases; and a roadmap to facilitate research in the global community.
Related Topics
Concepts
Metadata
- Type
- letter
- Language
- en
- Landing Page
- https://doi.org/10.1038/s41587-022-01369-0
- https://www.nature.com/articles/s41587-022-01369-0.pdf
- OA Status
- hybrid
- Cited By
- 221
- References
- 30
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W4285084440
All OpenAlex metadata
Raw OpenAlex JSON
- OpenAlex ID
-
https://openalex.org/W4285084440Canonical identifier for this work in OpenAlex
- DOI
-
https://doi.org/10.1038/s41587-022-01369-0Digital Object Identifier
- Title
-
Standardized annotation of translated open reading framesWork title
- Type
-
letterOpenAlex work type
- Language
-
enPrimary language
- Publication year
-
2022Year of publication
- Publication date
-
2022-07-01Full publication date if available
- Authors
-
Jonathan M. Mudge, Jorge Ruiz‐Orera, John R. Prensner, Marie A. Brunet, Ferriol Calvet, Irwin Jungreis, José M. González, Michele Magrane, Thomas F. Martínez, Jana Felicitas Schulz, Yucheng Yang, M. Mar Albà, Julie L. Aspden, Pavel V. Baranov, Ariel Bazzini, Elspeth A. Bruford, María Martín, Lorenzo Calviello, Anne‐Ruxandra Carvunis, Jin Chen, Juan Pablo Couso, Eric W. Deutsch, Paul Flicek, Adam Frankish, Mark Gerstein, Norbert Hübner, Nicholas T. Ingolia, Manolis Kellis, Gerben Menschaert, Robert L. Moritz, Uwe Ohler, Xavier Roucou, Alan Saghatelian, Jonathan S. Weissman, Sebastiaan van HeeschList of authors in order
- Landing page
-
https://doi.org/10.1038/s41587-022-01369-0Publisher landing page
- PDF URL
-
https://www.nature.com/articles/s41587-022-01369-0.pdfDirect link to full text PDF
- Open access
-
YesWhether a free full text is available
- OA status
-
hybridOpen access status per OpenAlex
- OA URL
-
https://www.nature.com/articles/s41587-022-01369-0.pdfDirect OA link when available
- Concepts
-
Annotation, Open reading frame, Reading (process), Computer science, Information retrieval, Computational biology, Natural language processing, Biology, Artificial intelligence, Linguistics, Genetics, Philosophy, Peptide sequence, GeneTop concepts (fields/topics) attached by OpenAlex
- Cited by
-
221Total citation count in OpenAlex
- Citations by year (recent)
-
2025: 67, 2024: 78, 2023: 54, 2022: 19, 2021: 2Per-year citation counts (last 5 years)
- References (count)
-
30Number of works referenced by this work
- Related works (count)
-
10Other works algorithmically related by OpenAlex
Full payload
| id | https://openalex.org/W4285084440 |
|---|---|
| doi | https://doi.org/10.1038/s41587-022-01369-0 |
| ids.doi | https://doi.org/10.1038/s41587-022-01369-0 |
| ids.pmid | https://pubmed.ncbi.nlm.nih.gov/35831657 |
| ids.openalex | https://openalex.org/W4285084440 |
| fwci | 42.68414282 |
| mesh[0].qualifier_ui | |
| mesh[0].descriptor_ui | D058977 |
| mesh[0].is_major_topic | False |
| mesh[0].qualifier_name | |
| mesh[0].descriptor_name | Molecular Sequence Annotation |
| mesh[1].qualifier_ui | |
| mesh[1].descriptor_ui | D016366 |
| mesh[1].is_major_topic | False |
| mesh[1].qualifier_name | |
| mesh[1].descriptor_name | Open Reading Frames |
| mesh[2].qualifier_ui | |
| mesh[2].descriptor_ui | D014176 |
| mesh[2].is_major_topic | True |
| mesh[2].qualifier_name | |
| mesh[2].descriptor_name | Protein Biosynthesis |
| mesh[3].qualifier_ui | Q000378 |
| mesh[3].descriptor_ui | D012270 |
| mesh[3].is_major_topic | True |
| mesh[3].qualifier_name | metabolism |
| mesh[3].descriptor_name | Ribosomes |
| mesh[4].qualifier_ui | |
| mesh[4].descriptor_ui | D058977 |
| mesh[4].is_major_topic | False |
| mesh[4].qualifier_name | |
| mesh[4].descriptor_name | Molecular Sequence Annotation |
| mesh[5].qualifier_ui | |
| mesh[5].descriptor_ui | D016366 |
| mesh[5].is_major_topic | False |
| mesh[5].qualifier_name | |
| mesh[5].descriptor_name | Open Reading Frames |
| mesh[6].qualifier_ui | |
| mesh[6].descriptor_ui | D014176 |
| mesh[6].is_major_topic | True |
| mesh[6].qualifier_name | |
| mesh[6].descriptor_name | Protein Biosynthesis |
| mesh[7].qualifier_ui | Q000378 |
| mesh[7].descriptor_ui | D012270 |
| mesh[7].is_major_topic | True |
| mesh[7].qualifier_name | metabolism |
| mesh[7].descriptor_name | Ribosomes |
| mesh[8].qualifier_ui | |
| mesh[8].descriptor_ui | D058977 |
| mesh[8].is_major_topic | False |
| mesh[8].qualifier_name | |
| mesh[8].descriptor_name | Molecular Sequence Annotation |
| mesh[9].qualifier_ui | |
| mesh[9].descriptor_ui | D016366 |
| mesh[9].is_major_topic | False |
| mesh[9].qualifier_name | |
| mesh[9].descriptor_name | Open Reading Frames |
| mesh[10].qualifier_ui | |
| mesh[10].descriptor_ui | D014176 |
| mesh[10].is_major_topic | True |
| mesh[10].qualifier_name | |
| mesh[10].descriptor_name | Protein Biosynthesis |
| mesh[11].qualifier_ui | Q000378 |
| mesh[11].descriptor_ui | D012270 |
| mesh[11].is_major_topic | True |
| mesh[11].qualifier_name | metabolism |
| mesh[11].descriptor_name | Ribosomes |
| type | letter |
| title | Standardized annotation of translated open reading frames |
| biblio.issue | 7 |
| biblio.volume | 40 |
| biblio.last_page | 999 |
| biblio.first_page | 994 |
| topics[0].id | https://openalex.org/T10181 |
| topics[0].field.id | https://openalex.org/fields/17 |
| topics[0].field.display_name | Computer Science |
| topics[0].score | 0.9983999729156494 |
| topics[0].domain.id | https://openalex.org/domains/3 |
| topics[0].domain.display_name | Physical Sciences |
| topics[0].subfield.id | https://openalex.org/subfields/1702 |
| topics[0].subfield.display_name | Artificial Intelligence |
| topics[0].display_name | Natural Language Processing Techniques |
| topics[1].id | https://openalex.org/T10521 |
| topics[1].field.id | https://openalex.org/fields/13 |
| topics[1].field.display_name | Biochemistry, Genetics and Molecular Biology |
| topics[1].score | 0.9725000262260437 |
| topics[1].domain.id | https://openalex.org/domains/1 |
| topics[1].domain.display_name | Life Sciences |
| topics[1].subfield.id | https://openalex.org/subfields/1312 |
| topics[1].subfield.display_name | Molecular Biology |
| topics[1].display_name | RNA and protein synthesis mechanisms |
| topics[2].id | https://openalex.org/T10015 |
| topics[2].field.id | https://openalex.org/fields/13 |
| topics[2].field.display_name | Biochemistry, Genetics and Molecular Biology |
| topics[2].score | 0.9531999826431274 |
| topics[2].domain.id | https://openalex.org/domains/1 |
| topics[2].domain.display_name | Life Sciences |
| topics[2].subfield.id | https://openalex.org/subfields/1312 |
| topics[2].subfield.display_name | Molecular Biology |
| topics[2].display_name | Genomics and Phylogenetic Studies |
| is_xpac | False |
| apc_list.value | 9750 |
| apc_list.currency | EUR |
| apc_list.value_usd | 11690 |
| apc_paid.value | 9750 |
| apc_paid.currency | EUR |
| apc_paid.value_usd | 11690 |
| concepts[0].id | https://openalex.org/C2776321320 |
| concepts[0].level | 2 |
| concepts[0].score | 0.7617034912109375 |
| concepts[0].wikidata | https://www.wikidata.org/wiki/Q857525 |
| concepts[0].display_name | Annotation |
| concepts[1].id | https://openalex.org/C47289529 |
| concepts[1].level | 4 |
| concepts[1].score | 0.6241259574890137 |
| concepts[1].wikidata | https://www.wikidata.org/wiki/Q908550 |
| concepts[1].display_name | Open reading frame |
| concepts[2].id | https://openalex.org/C554936623 |
| concepts[2].level | 2 |
| concepts[2].score | 0.554980456829071 |
| concepts[2].wikidata | https://www.wikidata.org/wiki/Q199657 |
| concepts[2].display_name | Reading (process) |
| concepts[3].id | https://openalex.org/C41008148 |
| concepts[3].level | 0 |
| concepts[3].score | 0.4836060106754303 |
| concepts[3].wikidata | https://www.wikidata.org/wiki/Q21198 |
| concepts[3].display_name | Computer science |
| concepts[4].id | https://openalex.org/C23123220 |
| concepts[4].level | 1 |
| concepts[4].score | 0.3484654128551483 |
| concepts[4].wikidata | https://www.wikidata.org/wiki/Q816826 |
| concepts[4].display_name | Information retrieval |
| concepts[5].id | https://openalex.org/C70721500 |
| concepts[5].level | 1 |
| concepts[5].score | 0.33280235528945923 |
| concepts[5].wikidata | https://www.wikidata.org/wiki/Q177005 |
| concepts[5].display_name | Computational biology |
| concepts[6].id | https://openalex.org/C204321447 |
| concepts[6].level | 1 |
| concepts[6].score | 0.33056849241256714 |
| concepts[6].wikidata | https://www.wikidata.org/wiki/Q30642 |
| concepts[6].display_name | Natural language processing |
| concepts[7].id | https://openalex.org/C86803240 |
| concepts[7].level | 0 |
| concepts[7].score | 0.31275975704193115 |
| concepts[7].wikidata | https://www.wikidata.org/wiki/Q420 |
| concepts[7].display_name | Biology |
| concepts[8].id | https://openalex.org/C154945302 |
| concepts[8].level | 1 |
| concepts[8].score | 0.28147584199905396 |
| concepts[8].wikidata | https://www.wikidata.org/wiki/Q11660 |
| concepts[8].display_name | Artificial intelligence |
| concepts[9].id | https://openalex.org/C41895202 |
| concepts[9].level | 1 |
| concepts[9].score | 0.22114154696464539 |
| concepts[9].wikidata | https://www.wikidata.org/wiki/Q8162 |
| concepts[9].display_name | Linguistics |
| concepts[10].id | https://openalex.org/C54355233 |
| concepts[10].level | 1 |
| concepts[10].score | 0.19418805837631226 |
| concepts[10].wikidata | https://www.wikidata.org/wiki/Q7162 |
| concepts[10].display_name | Genetics |
| concepts[11].id | https://openalex.org/C138885662 |
| concepts[11].level | 0 |
| concepts[11].score | 0.1337783932685852 |
| concepts[11].wikidata | https://www.wikidata.org/wiki/Q5891 |
| concepts[11].display_name | Philosophy |
| concepts[12].id | https://openalex.org/C167625842 |
| concepts[12].level | 3 |
| concepts[12].score | 0.05625128746032715 |
| concepts[12].wikidata | https://www.wikidata.org/wiki/Q899763 |
| concepts[12].display_name | Peptide sequence |
| concepts[13].id | https://openalex.org/C104317684 |
| concepts[13].level | 2 |
| concepts[13].score | 0.0 |
| concepts[13].wikidata | https://www.wikidata.org/wiki/Q7187 |
| concepts[13].display_name | Gene |
| keywords[0].id | https://openalex.org/keywords/annotation |
| keywords[0].score | 0.7617034912109375 |
| keywords[0].display_name | Annotation |
| keywords[1].id | https://openalex.org/keywords/open-reading-frame |
| keywords[1].score | 0.6241259574890137 |
| keywords[1].display_name | Open reading frame |
| keywords[2].id | https://openalex.org/keywords/reading |
| keywords[2].score | 0.554980456829071 |
| keywords[2].display_name | Reading (process) |
| keywords[3].id | https://openalex.org/keywords/computer-science |
| keywords[3].score | 0.4836060106754303 |
| keywords[3].display_name | Computer science |
| keywords[4].id | https://openalex.org/keywords/information-retrieval |
| keywords[4].score | 0.3484654128551483 |
| keywords[4].display_name | Information retrieval |
| keywords[5].id | https://openalex.org/keywords/computational-biology |
| keywords[5].score | 0.33280235528945923 |
| keywords[5].display_name | Computational biology |
| keywords[6].id | https://openalex.org/keywords/natural-language-processing |
| keywords[6].score | 0.33056849241256714 |
| keywords[6].display_name | Natural language processing |
| keywords[7].id | https://openalex.org/keywords/biology |
| keywords[7].score | 0.31275975704193115 |
| keywords[7].display_name | Biology |
| keywords[8].id | https://openalex.org/keywords/artificial-intelligence |
| keywords[8].score | 0.28147584199905396 |
| keywords[8].display_name | Artificial intelligence |
| keywords[9].id | https://openalex.org/keywords/linguistics |
| keywords[9].score | 0.22114154696464539 |
| keywords[9].display_name | Linguistics |
| keywords[10].id | https://openalex.org/keywords/genetics |
| keywords[10].score | 0.19418805837631226 |
| keywords[10].display_name | Genetics |
| keywords[11].id | https://openalex.org/keywords/philosophy |
| keywords[11].score | 0.1337783932685852 |
| keywords[11].display_name | Philosophy |
| keywords[12].id | https://openalex.org/keywords/peptide-sequence |
| keywords[12].score | 0.05625128746032715 |
| keywords[12].display_name | Peptide sequence |
| language | en |
| locations[0].id | doi:10.1038/s41587-022-01369-0 |
| locations[0].is_oa | True |
| locations[0].source.id | https://openalex.org/S106963461 |
| locations[0].source.issn | 1087-0156, 1546-1696 |
| locations[0].source.type | journal |
| locations[0].source.is_oa | False |
| locations[0].source.issn_l | 1087-0156 |
| locations[0].source.is_core | True |
| locations[0].source.is_in_doaj | False |
| locations[0].source.display_name | Nature Biotechnology |
| locations[0].source.host_organization | https://openalex.org/P4310319908 |
| locations[0].source.host_organization_name | Nature Portfolio |
| locations[0].source.host_organization_lineage | https://openalex.org/P4310319908 |
| locations[0].license | cc-by |
| locations[0].pdf_url | https://www.nature.com/articles/s41587-022-01369-0.pdf |
| locations[0].version | publishedVersion |
| locations[0].raw_type | journal-article |
| locations[0].license_id | https://openalex.org/licenses/cc-by |
| locations[0].is_accepted | True |
| locations[0].is_published | True |
| locations[0].raw_source_name | Nature Biotechnology |
| locations[0].landing_page_url | https://doi.org/10.1038/s41587-022-01369-0 |
| locations[1].id | pmh:oai:archive.ugent.be:01GKM4S1GAKSS4DFHCSGKE36B1 |
| locations[1].is_oa | False |
| locations[1].source.id | https://openalex.org/S4306400477 |
| locations[1].source.issn | |
| locations[1].source.type | repository |
| locations[1].source.is_oa | False |
| locations[1].source.issn_l | |
| locations[1].source.is_core | False |
| locations[1].source.is_in_doaj | False |
| locations[1].source.display_name | Ghent University Academic Bibliography (Ghent University) |
| locations[1].source.host_organization | https://openalex.org/I32597200 |
| locations[1].source.host_organization_name | Ghent University |
| locations[1].source.host_organization_lineage | https://openalex.org/I32597200 |
| locations[1].license | |
| locations[1].pdf_url | |
| locations[1].version | publishedVersion |
| locations[1].raw_type | journalArticle |
| locations[1].license_id | |
| locations[1].is_accepted | True |
| locations[1].is_published | True |
| locations[1].raw_source_name | NATURE BIOTECHNOLOGY |
| locations[1].landing_page_url | https://biblio.ugent.be/publication/01GKM4S1GAKSS4DFHCSGKE36B1 |
| locations[2].id | pmid:35831657 |
| locations[2].is_oa | False |
| locations[2].source.id | https://openalex.org/S4306525036 |
| locations[2].source.issn | |
| locations[2].source.type | repository |
| locations[2].source.is_oa | False |
| locations[2].source.issn_l | |
| locations[2].source.is_core | False |
| locations[2].source.is_in_doaj | False |
| locations[2].source.display_name | PubMed |
| locations[2].source.host_organization | https://openalex.org/I1299303238 |
| locations[2].source.host_organization_name | National Institutes of Health |
| locations[2].source.host_organization_lineage | https://openalex.org/I1299303238 |
| locations[2].license | |
| locations[2].pdf_url | |
| locations[2].version | publishedVersion |
| locations[2].raw_type | |
| locations[2].license_id | |
| locations[2].is_accepted | True |
| locations[2].is_published | True |
| locations[2].raw_source_name | Nature biotechnology |
| locations[2].landing_page_url | https://pubmed.ncbi.nlm.nih.gov/35831657 |
| locations[3].id | pmh:oai:archive.ugent.be:01GM2Y0Y5YYN6V5FD15MT6X85S |
| locations[3].is_oa | False |
| locations[3].source.id | https://openalex.org/S4306400477 |
| locations[3].source.issn | |
| locations[3].source.type | repository |
| locations[3].source.is_oa | False |
| locations[3].source.issn_l | |
| locations[3].source.is_core | False |
| locations[3].source.is_in_doaj | False |
| locations[3].source.display_name | Ghent University Academic Bibliography (Ghent University) |
| locations[3].source.host_organization | https://openalex.org/I32597200 |
| locations[3].source.host_organization_name | Ghent University |
| locations[3].source.host_organization_lineage | https://openalex.org/I32597200 |
| locations[3].license | |
| locations[3].pdf_url | |
| locations[3].version | publishedVersion |
| locations[3].raw_type | journalArticle |
| locations[3].license_id | |
| locations[3].is_accepted | True |
| locations[3].is_published | True |
| locations[3].raw_source_name | NATURE BIOTECHNOLOGY |
| locations[3].landing_page_url | https://biblio.ugent.be/publication/01GM2Y0Y5YYN6V5FD15MT6X85S |
| locations[4].id | pmh:oai:pubmedcentral.nih.gov:9757701 |
| locations[4].is_oa | True |
| locations[4].source.id | https://openalex.org/S2764455111 |
| locations[4].source.issn | |
| locations[4].source.type | repository |
| locations[4].source.is_oa | False |
| locations[4].source.issn_l | |
| locations[4].source.is_core | False |
| locations[4].source.is_in_doaj | False |
| locations[4].source.display_name | PubMed Central |
| locations[4].source.host_organization | https://openalex.org/I1299303238 |
| locations[4].source.host_organization_name | National Institutes of Health |
| locations[4].source.host_organization_lineage | https://openalex.org/I1299303238 |
| locations[4].license | |
| locations[4].pdf_url | |
| locations[4].version | submittedVersion |
| locations[4].raw_type | Text |
| locations[4].license_id | |
| locations[4].is_accepted | False |
| locations[4].is_published | False |
| locations[4].raw_source_name | Nat Biotechnol |
| locations[4].landing_page_url | https://www.ncbi.nlm.nih.gov/pmc/articles/9757701 |
| locations[5].id | pmh:oai:digital.csic.es:10261/296147 |
| locations[5].is_oa | True |
| locations[5].source.id | https://openalex.org/S4306400616 |
| locations[5].source.issn | |
| locations[5].source.type | repository |
| locations[5].source.is_oa | False |
| locations[5].source.issn_l | |
| locations[5].source.is_core | False |
| locations[5].source.is_in_doaj | False |
| locations[5].source.display_name | DIGITAL.CSIC (Spanish National Research Council (CSIC)) |
| locations[5].source.host_organization | https://openalex.org/I134820265 |
| locations[5].source.host_organization_name | Consejo Superior de Investigaciones Científicas |
| locations[5].source.host_organization_lineage | https://openalex.org/I134820265 |
| locations[5].license | cc-by |
| locations[5].pdf_url | |
| locations[5].version | submittedVersion |
| locations[5].raw_type | carta al editor |
| locations[5].license_id | https://openalex.org/licenses/cc-by |
| locations[5].is_accepted | False |
| locations[5].is_published | False |
| locations[5].raw_source_name | |
| locations[5].landing_page_url | http://hdl.handle.net/10261/296147 |
| indexed_in | crossref, pubmed |
| authorships[0].author.id | https://openalex.org/A5038283509 |
| authorships[0].author.orcid | https://orcid.org/0000-0003-4789-7495 |
| authorships[0].author.display_name | Jonathan M. Mudge |
| authorships[0].countries | GB |
| authorships[0].affiliations[0].institution_ids | https://openalex.org/I1303153112 |
| authorships[0].affiliations[0].raw_affiliation_string | European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK |
| authorships[0].institutions[0].id | https://openalex.org/I1303153112 |
| authorships[0].institutions[0].ror | https://ror.org/02catss52 |
| authorships[0].institutions[0].type | facility |
| authorships[0].institutions[0].lineage | https://openalex.org/I1303153112, https://openalex.org/I4210138560 |
| authorships[0].institutions[0].country_code | GB |
| authorships[0].institutions[0].display_name | European Bioinformatics Institute |
| authorships[0].author_position | first |
| authorships[0].raw_author_name | Jonathan M. Mudge |
| authorships[0].is_corresponding | True |
| authorships[0].raw_affiliation_strings | European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK |
| authorships[1].author.id | https://openalex.org/A5040905591 |
| authorships[1].author.orcid | https://orcid.org/0000-0002-8317-0034 |
| authorships[1].author.display_name | Jorge Ruiz‐Orera |
| authorships[1].countries | DE |
| authorships[1].affiliations[0].institution_ids | https://openalex.org/I205582932 |
| authorships[1].affiliations[0].raw_affiliation_string | Cardiovascular and Metabolic Sciences, Max Delbrück Center for Molecular Medicine in the Helmholtz Association (MDC), Berlin, Germany |
| authorships[1].institutions[0].id | https://openalex.org/I205582932 |
| authorships[1].institutions[0].ror | https://ror.org/04p5ggc03 |
| authorships[1].institutions[0].type | facility |
| authorships[1].institutions[0].lineage | https://openalex.org/I1305996414, https://openalex.org/I205582932 |
| authorships[1].institutions[0].country_code | DE |
| authorships[1].institutions[0].display_name | Max Delbrück Center |
| authorships[1].author_position | middle |
| authorships[1].raw_author_name | Jorge Ruiz-Orera |
| authorships[1].is_corresponding | True |
| authorships[1].raw_affiliation_strings | Cardiovascular and Metabolic Sciences, Max Delbrück Center for Molecular Medicine in the Helmholtz Association (MDC), Berlin, Germany |
| authorships[2].author.id | https://openalex.org/A5090136020 |
| authorships[2].author.orcid | https://orcid.org/0000-0002-7024-636X |
| authorships[2].author.display_name | John R. Prensner |
| authorships[2].countries | US |
| authorships[2].affiliations[0].institution_ids | https://openalex.org/I107606265 |
| authorships[2].affiliations[0].raw_affiliation_string | Broad Institute of MIT and Harvard, Cambridge, MA, USA |
| authorships[2].institutions[0].id | https://openalex.org/I107606265 |
| authorships[2].institutions[0].ror | https://ror.org/05a0ya142 |
| authorships[2].institutions[0].type | nonprofit |
| authorships[2].institutions[0].lineage | https://openalex.org/I107606265 |
| authorships[2].institutions[0].country_code | US |
| authorships[2].institutions[0].display_name | Broad Institute |
| authorships[2].author_position | middle |
| authorships[2].raw_author_name | John R. Prensner |
| authorships[2].is_corresponding | True |
| authorships[2].raw_affiliation_strings | Broad Institute of MIT and Harvard, Cambridge, MA, USA |
| authorships[3].author.id | https://openalex.org/A5084963890 |
| authorships[3].author.orcid | https://orcid.org/0000-0001-5973-3522 |
| authorships[3].author.display_name | Marie A. Brunet |
| authorships[3].countries | CA |
| authorships[3].affiliations[0].institution_ids | https://openalex.org/I135117807 |
| authorships[3].affiliations[0].raw_affiliation_string | Department of Pediatrics, Medical Genetics Service, Université de Sherbrooke, Sherbrooke, Quebec, Canada |
| authorships[3].institutions[0].id | https://openalex.org/I135117807 |
| authorships[3].institutions[0].ror | https://ror.org/00kybxq39 |
| authorships[3].institutions[0].type | education |
| authorships[3].institutions[0].lineage | https://openalex.org/I135117807 |
| authorships[3].institutions[0].country_code | CA |
| authorships[3].institutions[0].display_name | Université de Sherbrooke |
| authorships[3].author_position | middle |
| authorships[3].raw_author_name | Marie A. Brunet |
| authorships[3].is_corresponding | False |
| authorships[3].raw_affiliation_strings | Department of Pediatrics, Medical Genetics Service, Université de Sherbrooke, Sherbrooke, Quebec, Canada |
| authorships[4].author.id | https://openalex.org/A5017543247 |
| authorships[4].author.orcid | https://orcid.org/0000-0003-1841-9881 |
| authorships[4].author.display_name | Ferriol Calvet |
| authorships[4].countries | GB |
| authorships[4].affiliations[0].institution_ids | https://openalex.org/I1303153112 |
| authorships[4].affiliations[0].raw_affiliation_string | European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK |
| authorships[4].institutions[0].id | https://openalex.org/I1303153112 |
| authorships[4].institutions[0].ror | https://ror.org/02catss52 |
| authorships[4].institutions[0].type | facility |
| authorships[4].institutions[0].lineage | https://openalex.org/I1303153112, https://openalex.org/I4210138560 |
| authorships[4].institutions[0].country_code | GB |
| authorships[4].institutions[0].display_name | European Bioinformatics Institute |
| authorships[4].author_position | middle |
| authorships[4].raw_author_name | Ferriol Calvet |
| authorships[4].is_corresponding | False |
| authorships[4].raw_affiliation_strings | European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK |
| authorships[5].author.id | https://openalex.org/A5066586114 |
| authorships[5].author.orcid | https://orcid.org/0000-0002-3197-5367 |
| authorships[5].author.display_name | Irwin Jungreis |
| authorships[5].countries | US |
| authorships[5].affiliations[0].institution_ids | https://openalex.org/I107606265 |
| authorships[5].affiliations[0].raw_affiliation_string | Broad Institute of MIT and Harvard, Cambridge, MA, USA |
| authorships[5].institutions[0].id | https://openalex.org/I107606265 |
| authorships[5].institutions[0].ror | https://ror.org/05a0ya142 |
| authorships[5].institutions[0].type | nonprofit |
| authorships[5].institutions[0].lineage | https://openalex.org/I107606265 |
| authorships[5].institutions[0].country_code | US |
| authorships[5].institutions[0].display_name | Broad Institute |
| authorships[5].author_position | middle |
| authorships[5].raw_author_name | Irwin Jungreis |
| authorships[5].is_corresponding | False |
| authorships[5].raw_affiliation_strings | Broad Institute of MIT and Harvard, Cambridge, MA, USA |
| authorships[6].author.id | https://openalex.org/A5101741653 |
| authorships[6].author.orcid | https://orcid.org/0000-0001-5569-0705 |
| authorships[6].author.display_name | José M. González |
| authorships[6].countries | GB |
| authorships[6].affiliations[0].institution_ids | https://openalex.org/I1303153112 |
| authorships[6].affiliations[0].raw_affiliation_string | European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK |
| authorships[6].institutions[0].id | https://openalex.org/I1303153112 |
| authorships[6].institutions[0].ror | https://ror.org/02catss52 |
| authorships[6].institutions[0].type | facility |
| authorships[6].institutions[0].lineage | https://openalex.org/I1303153112, https://openalex.org/I4210138560 |
| authorships[6].institutions[0].country_code | GB |
| authorships[6].institutions[0].display_name | European Bioinformatics Institute |
| authorships[6].author_position | middle |
| authorships[6].raw_author_name | Jose Manuel Gonzalez |
| authorships[6].is_corresponding | False |
| authorships[6].raw_affiliation_strings | European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK |
| authorships[7].author.id | https://openalex.org/A5004635493 |
| authorships[7].author.orcid | https://orcid.org/0000-0003-3544-996X |
| authorships[7].author.display_name | Michele Magrane |
| authorships[7].countries | GB |
| authorships[7].affiliations[0].institution_ids | https://openalex.org/I1303153112 |
| authorships[7].affiliations[0].raw_affiliation_string | European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK |
| authorships[7].institutions[0].id | https://openalex.org/I1303153112 |
| authorships[7].institutions[0].ror | https://ror.org/02catss52 |
| authorships[7].institutions[0].type | facility |
| authorships[7].institutions[0].lineage | https://openalex.org/I1303153112, https://openalex.org/I4210138560 |
| authorships[7].institutions[0].country_code | GB |
| authorships[7].institutions[0].display_name | European Bioinformatics Institute |
| authorships[7].author_position | middle |
| authorships[7].raw_author_name | Michele Magrane |
| authorships[7].is_corresponding | False |
| authorships[7].raw_affiliation_strings | European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK |
| authorships[8].author.id | https://openalex.org/A5022082957 |
| authorships[8].author.orcid | https://orcid.org/0000-0002-4011-8164 |
| authorships[8].author.display_name | Thomas F. Martínez |
| authorships[8].countries | US |
| authorships[8].affiliations[0].institution_ids | https://openalex.org/I1307098950 |
| authorships[8].affiliations[0].raw_affiliation_string | Clayton Foundation Laboratories for Peptide Biology, Salk Institute for Biological Studies, La Jolla, CA, USA |
| authorships[8].institutions[0].id | https://openalex.org/I1307098950 |
| authorships[8].institutions[0].ror | https://ror.org/03xez1567 |
| authorships[8].institutions[0].type | nonprofit |
| authorships[8].institutions[0].lineage | https://openalex.org/I1307098950 |
| authorships[8].institutions[0].country_code | US |
| authorships[8].institutions[0].display_name | Salk Institute for Biological Studies |
| authorships[8].author_position | middle |
| authorships[8].raw_author_name | Thomas F. Martinez |
| authorships[8].is_corresponding | False |
| authorships[8].raw_affiliation_strings | Clayton Foundation Laboratories for Peptide Biology, Salk Institute for Biological Studies, La Jolla, CA, USA |
| authorships[9].author.id | https://openalex.org/A5070129785 |
| authorships[9].author.orcid | https://orcid.org/0000-0002-8157-2224 |
| authorships[9].author.display_name | Jana Felicitas Schulz |
| authorships[9].countries | DE |
| authorships[9].affiliations[0].institution_ids | https://openalex.org/I205582932 |
| authorships[9].affiliations[0].raw_affiliation_string | Cardiovascular and Metabolic Sciences, Max Delbrück Center for Molecular Medicine in the Helmholtz Association (MDC), Berlin, Germany |
| authorships[9].institutions[0].id | https://openalex.org/I205582932 |
| authorships[9].institutions[0].ror | https://ror.org/04p5ggc03 |
| authorships[9].institutions[0].type | facility |
| authorships[9].institutions[0].lineage | https://openalex.org/I1305996414, https://openalex.org/I205582932 |
| authorships[9].institutions[0].country_code | DE |
| authorships[9].institutions[0].display_name | Max Delbrück Center |
| authorships[9].author_position | middle |
| authorships[9].raw_author_name | Jana Felicitas Schulz |
| authorships[9].is_corresponding | False |
| authorships[9].raw_affiliation_strings | Cardiovascular and Metabolic Sciences, Max Delbrück Center for Molecular Medicine in the Helmholtz Association (MDC), Berlin, Germany |
| authorships[10].author.id | https://openalex.org/A5012454723 |
| authorships[10].author.orcid | https://orcid.org/0000-0002-6873-5279 |
| authorships[10].author.display_name | Yucheng Yang |
| authorships[10].countries | US |
| authorships[10].affiliations[0].institution_ids | https://openalex.org/I32971472 |
| authorships[10].affiliations[0].raw_affiliation_string | Program in Computational Biology & Bioinformatics, Yale University, New Haven, CT, USA |
| authorships[10].institutions[0].id | https://openalex.org/I32971472 |
| authorships[10].institutions[0].ror | https://ror.org/03v76x132 |
| authorships[10].institutions[0].type | education |
| authorships[10].institutions[0].lineage | https://openalex.org/I32971472 |
| authorships[10].institutions[0].country_code | US |
| authorships[10].institutions[0].display_name | Yale University |
| authorships[10].author_position | middle |
| authorships[10].raw_author_name | Yucheng T. Yang |
| authorships[10].is_corresponding | False |
| authorships[10].raw_affiliation_strings | Program in Computational Biology & Bioinformatics, Yale University, New Haven, CT, USA |
| authorships[11].author.id | https://openalex.org/A5062672403 |
| authorships[11].author.orcid | https://orcid.org/0000-0002-7963-7375 |
| authorships[11].author.display_name | M. Mar Albà |
| authorships[11].countries | ES |
| authorships[11].affiliations[0].institution_ids | https://openalex.org/I170486558 |
| authorships[11].affiliations[0].raw_affiliation_string | Evolutionary Genomics Group, Research Programme on Biomedical Informatics, Hospital del Mar Research Institute (IMIM) and Universitat Pompeu Fabra (UPF), Barcelona, Spain |
| authorships[11].institutions[0].id | https://openalex.org/I170486558 |
| authorships[11].institutions[0].ror | https://ror.org/04n0g0b29 |
| authorships[11].institutions[0].type | education |
| authorships[11].institutions[0].lineage | https://openalex.org/I170486558 |
| authorships[11].institutions[0].country_code | ES |
| authorships[11].institutions[0].display_name | Universitat Pompeu Fabra |
| authorships[11].author_position | middle |
| authorships[11].raw_author_name | M. Mar Albà |
| authorships[11].is_corresponding | False |
| authorships[11].raw_affiliation_strings | Evolutionary Genomics Group, Research Programme on Biomedical Informatics, Hospital del Mar Research Institute (IMIM) and Universitat Pompeu Fabra (UPF), Barcelona, Spain |
| authorships[12].author.id | https://openalex.org/A5052979052 |
| authorships[12].author.orcid | https://orcid.org/0000-0002-8537-6204 |
| authorships[12].author.display_name | Julie L. Aspden |
| authorships[12].countries | GB |
| authorships[12].affiliations[0].institution_ids | https://openalex.org/I130828816 |
| authorships[12].affiliations[0].raw_affiliation_string | School of Molecular and Cellular Biology, Faculty of Biological Sciences, University of Leeds, Leeds, UK |
| authorships[12].institutions[0].id | https://openalex.org/I130828816 |
| authorships[12].institutions[0].ror | https://ror.org/024mrxd33 |
| authorships[12].institutions[0].type | education |
| authorships[12].institutions[0].lineage | https://openalex.org/I130828816 |
| authorships[12].institutions[0].country_code | GB |
| authorships[12].institutions[0].display_name | University of Leeds |
| authorships[12].author_position | middle |
| authorships[12].raw_author_name | Julie L. Aspden |
| authorships[12].is_corresponding | False |
| authorships[12].raw_affiliation_strings | School of Molecular and Cellular Biology, Faculty of Biological Sciences, University of Leeds, Leeds, UK |
| authorships[13].author.id | https://openalex.org/A5047187282 |
| authorships[13].author.orcid | https://orcid.org/0000-0001-9017-0270 |
| authorships[13].author.display_name | Pavel V. Baranov |
| authorships[13].countries | IE |
| authorships[13].affiliations[0].institution_ids | https://openalex.org/I27577105 |
| authorships[13].affiliations[0].raw_affiliation_string | School of Biochemistry and Cell Biology, University College Cork, Cork, Ireland |
| authorships[13].institutions[0].id | https://openalex.org/I27577105 |
| authorships[13].institutions[0].ror | https://ror.org/03265fv13 |
| authorships[13].institutions[0].type | education |
| authorships[13].institutions[0].lineage | https://openalex.org/I27577105 |
| authorships[13].institutions[0].country_code | IE |
| authorships[13].institutions[0].display_name | University College Cork |
| authorships[13].author_position | middle |
| authorships[13].raw_author_name | Pavel V. Baranov |
| authorships[13].is_corresponding | False |
| authorships[13].raw_affiliation_strings | School of Biochemistry and Cell Biology, University College Cork, Cork, Ireland |
| authorships[14].author.id | https://openalex.org/A5067621634 |
| authorships[14].author.orcid | https://orcid.org/0000-0002-2251-5174 |
| authorships[14].author.display_name | Ariel Bazzini |
| authorships[14].countries | US |
| authorships[14].affiliations[0].institution_ids | https://openalex.org/I114131015 |
| authorships[14].affiliations[0].raw_affiliation_string | Stowers Institute for Medical Research, Kansas City, MO, USA |
| authorships[14].institutions[0].id | https://openalex.org/I114131015 |
| authorships[14].institutions[0].ror | https://ror.org/04bgfm609 |
| authorships[14].institutions[0].type | nonprofit |
| authorships[14].institutions[0].lineage | https://openalex.org/I114131015 |
| authorships[14].institutions[0].country_code | US |
| authorships[14].institutions[0].display_name | Stowers Institute for Medical Research |
| authorships[14].author_position | middle |
| authorships[14].raw_author_name | Ariel A. Bazzini |
| authorships[14].is_corresponding | False |
| authorships[14].raw_affiliation_strings | Stowers Institute for Medical Research, Kansas City, MO, USA |
| authorships[15].author.id | https://openalex.org/A5028440222 |
| authorships[15].author.orcid | https://orcid.org/0000-0002-8380-5247 |
| authorships[15].author.display_name | Elspeth A. Bruford |
| authorships[15].countries | GB |
| authorships[15].affiliations[0].institution_ids | https://openalex.org/I1303153112 |
| authorships[15].affiliations[0].raw_affiliation_string | European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK |
| authorships[15].institutions[0].id | https://openalex.org/I1303153112 |
| authorships[15].institutions[0].ror | https://ror.org/02catss52 |
| authorships[15].institutions[0].type | facility |
| authorships[15].institutions[0].lineage | https://openalex.org/I1303153112, https://openalex.org/I4210138560 |
| authorships[15].institutions[0].country_code | GB |
| authorships[15].institutions[0].display_name | European Bioinformatics Institute |
| authorships[15].author_position | middle |
| authorships[15].raw_author_name | Elspeth Bruford |
| authorships[15].is_corresponding | False |
| authorships[15].raw_affiliation_strings | European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK |
| authorships[16].author.id | https://openalex.org/A5071535801 |
| authorships[16].author.orcid | https://orcid.org/0000-0001-5454-2815 |
| authorships[16].author.display_name | María Martín |
| authorships[16].countries | GB |
| authorships[16].affiliations[0].institution_ids | https://openalex.org/I1303153112 |
| authorships[16].affiliations[0].raw_affiliation_string | European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK |
| authorships[16].institutions[0].id | https://openalex.org/I1303153112 |
| authorships[16].institutions[0].ror | https://ror.org/02catss52 |
| authorships[16].institutions[0].type | facility |
| authorships[16].institutions[0].lineage | https://openalex.org/I1303153112, https://openalex.org/I4210138560 |
| authorships[16].institutions[0].country_code | GB |
| authorships[16].institutions[0].display_name | European Bioinformatics Institute |
| authorships[16].author_position | middle |
| authorships[16].raw_author_name | Maria Jesus Martin |
| authorships[16].is_corresponding | False |
| authorships[16].raw_affiliation_strings | European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK |
| authorships[17].author.id | https://openalex.org/A5062544718 |
| authorships[17].author.orcid | https://orcid.org/0000-0002-5600-0988 |
| authorships[17].author.display_name | Lorenzo Calviello |
| authorships[17].countries | IT |
| authorships[17].affiliations[0].institution_ids | https://openalex.org/I4210115812 |
| authorships[17].affiliations[0].raw_affiliation_string | Functional Genomics Centre, Human Technopole, Milan, Italy |
| authorships[17].institutions[0].id | https://openalex.org/I4210115812 |
| authorships[17].institutions[0].ror | https://ror.org/029gmnc79 |
| authorships[17].institutions[0].type | facility |
| authorships[17].institutions[0].lineage | https://openalex.org/I4210115812 |
| authorships[17].institutions[0].country_code | IT |
| authorships[17].institutions[0].display_name | Human Technopole |
| authorships[17].author_position | middle |
| authorships[17].raw_author_name | Lorenzo Calviello |
| authorships[17].is_corresponding | False |
| authorships[17].raw_affiliation_strings | Functional Genomics Centre, Human Technopole, Milan, Italy |
| authorships[18].author.id | https://openalex.org/A5044343989 |
| authorships[18].author.orcid | https://orcid.org/0000-0002-6474-6413 |
| authorships[18].author.display_name | Anne‐Ruxandra Carvunis |
| authorships[18].countries | US |
| authorships[18].affiliations[0].institution_ids | https://openalex.org/I170201317 |
| authorships[18].affiliations[0].raw_affiliation_string | Department of Computational and Systems Biology, School of Medicine, University of Pittsburgh, Pittsburgh, PA, USA |
| authorships[18].institutions[0].id | https://openalex.org/I170201317 |
| authorships[18].institutions[0].ror | https://ror.org/01an3r305 |
| authorships[18].institutions[0].type | education |
| authorships[18].institutions[0].lineage | https://openalex.org/I170201317 |
| authorships[18].institutions[0].country_code | US |
| authorships[18].institutions[0].display_name | University of Pittsburgh |
| authorships[18].author_position | middle |
| authorships[18].raw_author_name | Anne-Ruxandra Carvunis |
| authorships[18].is_corresponding | False |
| authorships[18].raw_affiliation_strings | Department of Computational and Systems Biology, School of Medicine, University of Pittsburgh, Pittsburgh, PA, USA |
| authorships[19].author.id | https://openalex.org/A5100457173 |
| authorships[19].author.orcid | https://orcid.org/0000-0002-6634-4397 |
| authorships[19].author.display_name | Jin Chen |
| authorships[19].countries | US |
| authorships[19].affiliations[0].institution_ids | https://openalex.org/I867280407 |
| authorships[19].affiliations[0].raw_affiliation_string | Department of Pharmacology and Cecil H. and Ida Green Center for Reproductive Biology Sciences, University of Texas Southwestern Medical Center, Dallas, TX, USA |
| authorships[19].institutions[0].id | https://openalex.org/I867280407 |
| authorships[19].institutions[0].ror | https://ror.org/05byvp690 |
| authorships[19].institutions[0].type | education |
| authorships[19].institutions[0].lineage | https://openalex.org/I867280407 |
| authorships[19].institutions[0].country_code | US |
| authorships[19].institutions[0].display_name | The University of Texas Southwestern Medical Center |
| authorships[19].author_position | middle |
| authorships[19].raw_author_name | Jin Chen |
| authorships[19].is_corresponding | False |
| authorships[19].raw_affiliation_strings | Department of Pharmacology and Cecil H. and Ida Green Center for Reproductive Biology Sciences, University of Texas Southwestern Medical Center, Dallas, TX, USA |
| authorships[20].author.id | https://openalex.org/A5043270961 |
| authorships[20].author.orcid | https://orcid.org/0000-0002-8547-7312 |
| authorships[20].author.display_name | Juan Pablo Couso |
| authorships[20].countries | ES |
| authorships[20].affiliations[0].institution_ids | https://openalex.org/I4210111405 |
| authorships[20].affiliations[0].raw_affiliation_string | Centro Andaluz de Biologia del Desarrollo, CSIC-UPO, Seville, Spain |
| authorships[20].institutions[0].id | https://openalex.org/I4210111405 |
| authorships[20].institutions[0].ror | https://ror.org/01v5e3436 |
| authorships[20].institutions[0].type | facility |
| authorships[20].institutions[0].lineage | https://openalex.org/I134820265, https://openalex.org/I4210111405, https://openalex.org/I918821925, https://openalex.org/I95013407 |
| authorships[20].institutions[0].country_code | ES |
| authorships[20].institutions[0].display_name | Centro Andaluz de Biología del Desarrollo |
| authorships[20].author_position | middle |
| authorships[20].raw_author_name | Juan Pablo Couso |
| authorships[20].is_corresponding | False |
| authorships[20].raw_affiliation_strings | Centro Andaluz de Biologia del Desarrollo, CSIC-UPO, Seville, Spain |
| authorships[21].author.id | https://openalex.org/A5070102563 |
| authorships[21].author.orcid | https://orcid.org/0000-0001-8732-0928 |
| authorships[21].author.display_name | Eric W. Deutsch |
| authorships[21].countries | US |
| authorships[21].affiliations[0].institution_ids | https://openalex.org/I3148997608 |
| authorships[21].affiliations[0].raw_affiliation_string | Institute for Systems Biology, Seattle, WA, USA |
| authorships[21].institutions[0].id | https://openalex.org/I3148997608 |
| authorships[21].institutions[0].ror | https://ror.org/02tpgw303 |
| authorships[21].institutions[0].type | nonprofit |
| authorships[21].institutions[0].lineage | https://openalex.org/I3148997608 |
| authorships[21].institutions[0].country_code | US |
| authorships[21].institutions[0].display_name | Institute for Systems Biology |
| authorships[21].author_position | middle |
| authorships[21].raw_author_name | Eric W. Deutsch |
| authorships[21].is_corresponding | False |
| authorships[21].raw_affiliation_strings | Institute for Systems Biology, Seattle, WA, USA |
| authorships[22].author.id | https://openalex.org/A5006816272 |
| authorships[22].author.orcid | https://orcid.org/0000-0002-3897-7955 |
| authorships[22].author.display_name | Paul Flicek |
| authorships[22].countries | GB |
| authorships[22].affiliations[0].institution_ids | https://openalex.org/I1303153112 |
| authorships[22].affiliations[0].raw_affiliation_string | European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK |
| authorships[22].institutions[0].id | https://openalex.org/I1303153112 |
| authorships[22].institutions[0].ror | https://ror.org/02catss52 |
| authorships[22].institutions[0].type | facility |
| authorships[22].institutions[0].lineage | https://openalex.org/I1303153112, https://openalex.org/I4210138560 |
| authorships[22].institutions[0].country_code | GB |
| authorships[22].institutions[0].display_name | European Bioinformatics Institute |
| authorships[22].author_position | middle |
| authorships[22].raw_author_name | Paul Flicek |
| authorships[22].is_corresponding | False |
| authorships[22].raw_affiliation_strings | European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK |
| authorships[23].author.id | https://openalex.org/A5030993950 |
| authorships[23].author.orcid | https://orcid.org/0000-0002-4333-628X |
| authorships[23].author.display_name | Adam Frankish |
| authorships[23].countries | GB |
| authorships[23].affiliations[0].institution_ids | https://openalex.org/I1303153112 |
| authorships[23].affiliations[0].raw_affiliation_string | European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK |
| authorships[23].institutions[0].id | https://openalex.org/I1303153112 |
| authorships[23].institutions[0].ror | https://ror.org/02catss52 |
| authorships[23].institutions[0].type | facility |
| authorships[23].institutions[0].lineage | https://openalex.org/I1303153112, https://openalex.org/I4210138560 |
| authorships[23].institutions[0].country_code | GB |
| authorships[23].institutions[0].display_name | European Bioinformatics Institute |
| authorships[23].author_position | middle |
| authorships[23].raw_author_name | Adam Frankish |
| authorships[23].is_corresponding | False |
| authorships[23].raw_affiliation_strings | European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK |
| authorships[24].author.id | https://openalex.org/A5042321575 |
| authorships[24].author.orcid | https://orcid.org/0000-0002-9746-3719 |
| authorships[24].author.display_name | Mark Gerstein |
| authorships[24].countries | US |
| authorships[24].affiliations[0].institution_ids | https://openalex.org/I32971472 |
| authorships[24].affiliations[0].raw_affiliation_string | Program in Computational Biology & Bioinformatics, Yale University, New Haven, CT, USA |
| authorships[24].institutions[0].id | https://openalex.org/I32971472 |
| authorships[24].institutions[0].ror | https://ror.org/03v76x132 |
| authorships[24].institutions[0].type | education |
| authorships[24].institutions[0].lineage | https://openalex.org/I32971472 |
| authorships[24].institutions[0].country_code | US |
| authorships[24].institutions[0].display_name | Yale University |
| authorships[24].author_position | middle |
| authorships[24].raw_author_name | Mark Gerstein |
| authorships[24].is_corresponding | False |
| authorships[24].raw_affiliation_strings | Program in Computational Biology & Bioinformatics, Yale University, New Haven, CT, USA |
| authorships[25].author.id | https://openalex.org/A5058205173 |
| authorships[25].author.orcid | https://orcid.org/0000-0002-1218-6223 |
| authorships[25].author.display_name | Norbert Hübner |
| authorships[25].countries | DE |
| authorships[25].affiliations[0].institution_ids | https://openalex.org/I205582932 |
| authorships[25].affiliations[0].raw_affiliation_string | Cardiovascular and Metabolic Sciences, Max Delbrück Center for Molecular Medicine in the Helmholtz Association (MDC), Berlin, Germany |
| authorships[25].institutions[0].id | https://openalex.org/I205582932 |
| authorships[25].institutions[0].ror | https://ror.org/04p5ggc03 |
| authorships[25].institutions[0].type | facility |
| authorships[25].institutions[0].lineage | https://openalex.org/I1305996414, https://openalex.org/I205582932 |
| authorships[25].institutions[0].country_code | DE |
| authorships[25].institutions[0].display_name | Max Delbrück Center |
| authorships[25].author_position | middle |
| authorships[25].raw_author_name | Norbert Hubner |
| authorships[25].is_corresponding | False |
| authorships[25].raw_affiliation_strings | Cardiovascular and Metabolic Sciences, Max Delbrück Center for Molecular Medicine in the Helmholtz Association (MDC), Berlin, Germany |
| authorships[26].author.id | https://openalex.org/A5016282453 |
| authorships[26].author.orcid | https://orcid.org/0000-0002-3395-1545 |
| authorships[26].author.display_name | Nicholas T. Ingolia |
| authorships[26].countries | US |
| authorships[26].affiliations[0].institution_ids | https://openalex.org/I103922791, https://openalex.org/I95457486 |
| authorships[26].affiliations[0].raw_affiliation_string | Department of Molecular and Cell Biology and California Institute for Quantitative Biosciences, University of California, Berkeley, Berkeley, CA, USA |
| authorships[26].institutions[0].id | https://openalex.org/I103922791 |
| authorships[26].institutions[0].ror | https://ror.org/04n1n3n22 |
| authorships[26].institutions[0].type | nonprofit |
| authorships[26].institutions[0].lineage | https://openalex.org/I103922791, https://openalex.org/I180670191, https://openalex.org/I185103710, https://openalex.org/I95457486 |
| authorships[26].institutions[0].country_code | US |
| authorships[26].institutions[0].display_name | QB3 |
| authorships[26].institutions[1].id | https://openalex.org/I95457486 |
| authorships[26].institutions[1].ror | https://ror.org/01an7q238 |
| authorships[26].institutions[1].type | education |
| authorships[26].institutions[1].lineage | https://openalex.org/I95457486 |
| authorships[26].institutions[1].country_code | US |
| authorships[26].institutions[1].display_name | University of California, Berkeley |
| authorships[26].author_position | middle |
| authorships[26].raw_author_name | Nicholas T. Ingolia |
| authorships[26].is_corresponding | False |
| authorships[26].raw_affiliation_strings | Department of Molecular and Cell Biology and California Institute for Quantitative Biosciences, University of California, Berkeley, Berkeley, CA, USA |
| authorships[27].author.id | https://openalex.org/A5089977648 |
| authorships[27].author.orcid | https://orcid.org/0000-0001-7113-9630 |
| authorships[27].author.display_name | Manolis Kellis |
| authorships[27].affiliations[0].raw_affiliation_string | MIT Computer Science and Artificial Intelligence Laboratory, Cambridge, MA, USA |
| authorships[27].author_position | middle |
| authorships[27].raw_author_name | Manolis Kellis |
| authorships[27].is_corresponding | False |
| authorships[27].raw_affiliation_strings | MIT Computer Science and Artificial Intelligence Laboratory, Cambridge, MA, USA |
| authorships[28].author.id | https://openalex.org/A5058473391 |
| authorships[28].author.orcid | https://orcid.org/0000-0002-7575-2085 |
| authorships[28].author.display_name | Gerben Menschaert |
| authorships[28].countries | BE |
| authorships[28].affiliations[0].institution_ids | https://openalex.org/I32597200 |
| authorships[28].affiliations[0].raw_affiliation_string | Biobix, Lab of Bioinformatics and Computational Genomics, Department of Mathematical Modelling, Statistics and Bioinformatics, Ghent University, Ghent, Belgium |
| authorships[28].institutions[0].id | https://openalex.org/I32597200 |
| authorships[28].institutions[0].ror | https://ror.org/00cv9y106 |
| authorships[28].institutions[0].type | education |
| authorships[28].institutions[0].lineage | https://openalex.org/I32597200 |
| authorships[28].institutions[0].country_code | BE |
| authorships[28].institutions[0].display_name | Ghent University |
| authorships[28].author_position | middle |
| authorships[28].raw_author_name | Gerben Menschaert |
| authorships[28].is_corresponding | False |
| authorships[28].raw_affiliation_strings | Biobix, Lab of Bioinformatics and Computational Genomics, Department of Mathematical Modelling, Statistics and Bioinformatics, Ghent University, Ghent, Belgium |
| authorships[29].author.id | https://openalex.org/A5036737482 |
| authorships[29].author.orcid | https://orcid.org/0000-0002-3216-9447 |
| authorships[29].author.display_name | Robert L. Moritz |
| authorships[29].countries | US |
| authorships[29].affiliations[0].institution_ids | https://openalex.org/I3148997608 |
| authorships[29].affiliations[0].raw_affiliation_string | Institute for Systems Biology, Seattle, WA, USA |
| authorships[29].institutions[0].id | https://openalex.org/I3148997608 |
| authorships[29].institutions[0].ror | https://ror.org/02tpgw303 |
| authorships[29].institutions[0].type | nonprofit |
| authorships[29].institutions[0].lineage | https://openalex.org/I3148997608 |
| authorships[29].institutions[0].country_code | US |
| authorships[29].institutions[0].display_name | Institute for Systems Biology |
| authorships[29].author_position | middle |
| authorships[29].raw_author_name | Robert L. Moritz |
| authorships[29].is_corresponding | False |
| authorships[29].raw_affiliation_strings | Institute for Systems Biology, Seattle, WA, USA |
| authorships[30].author.id | https://openalex.org/A5000077668 |
| authorships[30].author.orcid | https://orcid.org/0000-0002-0881-3116 |
| authorships[30].author.display_name | Uwe Ohler |
| authorships[30].countries | DE |
| authorships[30].affiliations[0].institution_ids | https://openalex.org/I205582932 |
| authorships[30].affiliations[0].raw_affiliation_string | Berlin Institute for Medical Systems Biology, Max Delbrück Center for Molecular Medicine in the Helmholtz Association (MDC), Berlin, Germany |
| authorships[30].institutions[0].id | https://openalex.org/I205582932 |
| authorships[30].institutions[0].ror | https://ror.org/04p5ggc03 |
| authorships[30].institutions[0].type | facility |
| authorships[30].institutions[0].lineage | https://openalex.org/I1305996414, https://openalex.org/I205582932 |
| authorships[30].institutions[0].country_code | DE |
| authorships[30].institutions[0].display_name | Max Delbrück Center |
| authorships[30].author_position | middle |
| authorships[30].raw_author_name | Uwe Ohler |
| authorships[30].is_corresponding | False |
| authorships[30].raw_affiliation_strings | Berlin Institute for Medical Systems Biology, Max Delbrück Center for Molecular Medicine in the Helmholtz Association (MDC), Berlin, Germany |
| authorships[31].author.id | https://openalex.org/A5012450160 |
| authorships[31].author.orcid | https://orcid.org/0000-0001-9370-5584 |
| authorships[31].author.display_name | Xavier Roucou |
| authorships[31].countries | CA |
| authorships[31].affiliations[0].institution_ids | https://openalex.org/I135117807 |
| authorships[31].affiliations[0].raw_affiliation_string | Department of Biochemistry and Functional Genomics, Université de Sherbrooke, Sherbrooke, Québec, Canada |
| authorships[31].institutions[0].id | https://openalex.org/I135117807 |
| authorships[31].institutions[0].ror | https://ror.org/00kybxq39 |
| authorships[31].institutions[0].type | education |
| authorships[31].institutions[0].lineage | https://openalex.org/I135117807 |
| authorships[31].institutions[0].country_code | CA |
| authorships[31].institutions[0].display_name | Université de Sherbrooke |
| authorships[31].author_position | middle |
| authorships[31].raw_author_name | Xavier Roucou |
| authorships[31].is_corresponding | False |
| authorships[31].raw_affiliation_strings | Department of Biochemistry and Functional Genomics, Université de Sherbrooke, Sherbrooke, Québec, Canada |
| authorships[32].author.id | https://openalex.org/A5065981856 |
| authorships[32].author.orcid | https://orcid.org/0000-0002-0427-563X |
| authorships[32].author.display_name | Alan Saghatelian |
| authorships[32].countries | US |
| authorships[32].affiliations[0].institution_ids | https://openalex.org/I1307098950 |
| authorships[32].affiliations[0].raw_affiliation_string | Clayton Foundation Laboratories for Peptide Biology, Salk Institute for Biological Studies, La Jolla, CA, USA |
| authorships[32].institutions[0].id | https://openalex.org/I1307098950 |
| authorships[32].institutions[0].ror | https://ror.org/03xez1567 |
| authorships[32].institutions[0].type | nonprofit |
| authorships[32].institutions[0].lineage | https://openalex.org/I1307098950 |
| authorships[32].institutions[0].country_code | US |
| authorships[32].institutions[0].display_name | Salk Institute for Biological Studies |
| authorships[32].author_position | middle |
| authorships[32].raw_author_name | Alan Saghatelian |
| authorships[32].is_corresponding | False |
| authorships[32].raw_affiliation_strings | Clayton Foundation Laboratories for Peptide Biology, Salk Institute for Biological Studies, La Jolla, CA, USA |
| authorships[33].author.id | https://openalex.org/A5026663934 |
| authorships[33].author.orcid | https://orcid.org/0000-0003-2445-670X |
| authorships[33].author.display_name | Jonathan S. Weissman |
| authorships[33].countries | US |
| authorships[33].affiliations[0].institution_ids | https://openalex.org/I63966007 |
| authorships[33].affiliations[0].raw_affiliation_string | Department of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA |
| authorships[33].institutions[0].id | https://openalex.org/I63966007 |
| authorships[33].institutions[0].ror | https://ror.org/042nb2s44 |
| authorships[33].institutions[0].type | education |
| authorships[33].institutions[0].lineage | https://openalex.org/I63966007 |
| authorships[33].institutions[0].country_code | US |
| authorships[33].institutions[0].display_name | Massachusetts Institute of Technology |
| authorships[33].author_position | middle |
| authorships[33].raw_author_name | Jonathan S. Weissman |
| authorships[33].is_corresponding | False |
| authorships[33].raw_affiliation_strings | Department of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA |
| authorships[34].author.id | https://openalex.org/A5088885084 |
| authorships[34].author.orcid | https://orcid.org/0000-0001-9593-1980 |
| authorships[34].author.display_name | Sebastiaan van Heesch |
| authorships[34].countries | NL |
| authorships[34].affiliations[0].institution_ids | https://openalex.org/I4210127118 |
| authorships[34].affiliations[0].raw_affiliation_string | Princess Máxima Center for Pediatric Oncology, Utrecht, the Netherlands |
| authorships[34].institutions[0].id | https://openalex.org/I4210127118 |
| authorships[34].institutions[0].ror | https://ror.org/02aj7yc53 |
| authorships[34].institutions[0].type | healthcare |
| authorships[34].institutions[0].lineage | https://openalex.org/I4210127118 |
| authorships[34].institutions[0].country_code | NL |
| authorships[34].institutions[0].display_name | Princess Máxima Center |
| authorships[34].author_position | last |
| authorships[34].raw_author_name | Sebastiaan van Heesch |
| authorships[34].is_corresponding | True |
| authorships[34].raw_affiliation_strings | Princess Máxima Center for Pediatric Oncology, Utrecht, the Netherlands |
| has_content.pdf | True |
| has_content.grobid_xml | True |
| is_paratext | False |
| open_access.is_oa | True |
| open_access.oa_url | https://www.nature.com/articles/s41587-022-01369-0.pdf |
| open_access.oa_status | hybrid |
| open_access.any_repository_has_fulltext | False |
| created_date | 2025-10-10T00:00:00 |
| display_name | Standardized annotation of translated open reading frames |
| has_fulltext | False |
| is_retracted | False |
| updated_date | 2025-11-06T03:46:38.306776 |
| primary_topic.id | https://openalex.org/T10181 |
| primary_topic.field.id | https://openalex.org/fields/17 |
| primary_topic.field.display_name | Computer Science |
| primary_topic.score | 0.9983999729156494 |
| primary_topic.domain.id | https://openalex.org/domains/3 |
| primary_topic.domain.display_name | Physical Sciences |
| primary_topic.subfield.id | https://openalex.org/subfields/1702 |
| primary_topic.subfield.display_name | Artificial Intelligence |
| primary_topic.display_name | Natural Language Processing Techniques |
| related_works | https://openalex.org/W2361861616, https://openalex.org/W2263699433, https://openalex.org/W2377979023, https://openalex.org/W2218034408, https://openalex.org/W2392921965, https://openalex.org/W2358755282, https://openalex.org/W2625833328, https://openalex.org/W1533177136, https://openalex.org/W4380994516, https://openalex.org/W2556260348 |
| cited_by_count | 221 |
| counts_by_year[0].year | 2025 |
| counts_by_year[0].cited_by_count | 67 |
| counts_by_year[1].year | 2024 |
| counts_by_year[1].cited_by_count | 78 |
| counts_by_year[2].year | 2023 |
| counts_by_year[2].cited_by_count | 54 |
| counts_by_year[3].year | 2022 |
| counts_by_year[3].cited_by_count | 19 |
| counts_by_year[4].year | 2021 |
| counts_by_year[4].cited_by_count | 2 |
| counts_by_year[5].year | 2020 |
| counts_by_year[5].cited_by_count | 1 |
| locations_count | 6 |
| best_oa_location.id | doi:10.1038/s41587-022-01369-0 |
| best_oa_location.is_oa | True |
| best_oa_location.source.id | https://openalex.org/S106963461 |
| best_oa_location.source.issn | 1087-0156, 1546-1696 |
| best_oa_location.source.type | journal |
| best_oa_location.source.is_oa | False |
| best_oa_location.source.issn_l | 1087-0156 |
| best_oa_location.source.is_core | True |
| best_oa_location.source.is_in_doaj | False |
| best_oa_location.source.display_name | Nature Biotechnology |
| best_oa_location.source.host_organization | https://openalex.org/P4310319908 |
| best_oa_location.source.host_organization_name | Nature Portfolio |
| best_oa_location.source.host_organization_lineage | https://openalex.org/P4310319908 |
| best_oa_location.license | cc-by |
| best_oa_location.pdf_url | https://www.nature.com/articles/s41587-022-01369-0.pdf |
| best_oa_location.version | publishedVersion |
| best_oa_location.raw_type | journal-article |
| best_oa_location.license_id | https://openalex.org/licenses/cc-by |
| best_oa_location.is_accepted | True |
| best_oa_location.is_published | True |
| best_oa_location.raw_source_name | Nature Biotechnology |
| best_oa_location.landing_page_url | https://doi.org/10.1038/s41587-022-01369-0 |
| primary_location.id | doi:10.1038/s41587-022-01369-0 |
| primary_location.is_oa | True |
| primary_location.source.id | https://openalex.org/S106963461 |
| primary_location.source.issn | 1087-0156, 1546-1696 |
| primary_location.source.type | journal |
| primary_location.source.is_oa | False |
| primary_location.source.issn_l | 1087-0156 |
| primary_location.source.is_core | True |
| primary_location.source.is_in_doaj | False |
| primary_location.source.display_name | Nature Biotechnology |
| primary_location.source.host_organization | https://openalex.org/P4310319908 |
| primary_location.source.host_organization_name | Nature Portfolio |
| primary_location.source.host_organization_lineage | https://openalex.org/P4310319908 |
| primary_location.license | cc-by |
| primary_location.pdf_url | https://www.nature.com/articles/s41587-022-01369-0.pdf |
| primary_location.version | publishedVersion |
| primary_location.raw_type | journal-article |
| primary_location.license_id | https://openalex.org/licenses/cc-by |
| primary_location.is_accepted | True |
| primary_location.is_published | True |
| primary_location.raw_source_name | Nature Biotechnology |
| primary_location.landing_page_url | https://doi.org/10.1038/s41587-022-01369-0 |
| publication_date | 2022-07-01 |
| publication_year | 2022 |
| referenced_works | https://openalex.org/W2079517684, https://openalex.org/W2947880448, https://openalex.org/W2205343347, https://openalex.org/W2262417550, https://openalex.org/W2992003657, https://openalex.org/W3010073072, https://openalex.org/W3047478576, https://openalex.org/W2308140312, https://openalex.org/W2770089238, https://openalex.org/W2753494277, https://openalex.org/W2891289814, https://openalex.org/W3121330721, https://openalex.org/W2792251295, https://openalex.org/W1980438612, https://openalex.org/W2052772529, https://openalex.org/W2071849521, https://openalex.org/W2139658526, https://openalex.org/W2981175235, https://openalex.org/W2908053922, https://openalex.org/W3032045451, https://openalex.org/W3178196354, https://openalex.org/W3092794487, https://openalex.org/W3205324211, https://openalex.org/W2903083041, https://openalex.org/W3125963888, https://openalex.org/W2750707132, https://openalex.org/W2990435446, https://openalex.org/W3010737707, https://openalex.org/W2024751967, https://openalex.org/W2896066313 |
| referenced_works_count | 30 |
| abstract_inverted_index.a | 88, 113, 130, 138, 152 |
| abstract_inverted_index.by | 96 |
| abstract_inverted_index.in | 43, 157 |
| abstract_inverted_index.is | 61 |
| abstract_inverted_index.it | 60 |
| abstract_inverted_index.of | 7, 11, 17, 32, 46, 50, 82, 102, 133 |
| abstract_inverted_index.to | 128, 140, 154 |
| abstract_inverted_index.we | 111 |
| abstract_inverted_index.ORF | 84 |
| abstract_inverted_index.and | 27, 56, 74, 126, 151 |
| abstract_inverted_index.for | 144 |
| abstract_inverted_index.has | 3, 86 |
| abstract_inverted_index.our | 5 |
| abstract_inverted_index.the | 8, 12, 80, 118, 158 |
| abstract_inverted_index.Gene | 120 |
| abstract_inverted_index.HUGO | 119 |
| abstract_inverted_index.ORFs | 48, 93, 146 |
| abstract_inverted_index.RNAs | 25 |
| abstract_inverted_index.Yet, | 59 |
| abstract_inverted_index.been | 41 |
| abstract_inverted_index.gene | 37, 72 |
| abstract_inverted_index.have | 40, 76 |
| abstract_inverted_index.into | 147 |
| abstract_inverted_index.lack | 101 |
| abstract_inverted_index.long | 23 |
| abstract_inverted_index.make | 67 |
| abstract_inverted_index.many | 75 |
| abstract_inverted_index.open | 18 |
| abstract_inverted_index.path | 139 |
| abstract_inverted_index.that | 63 |
| abstract_inverted_index.this | 100 |
| abstract_inverted_index.will | 104 |
| abstract_inverted_index.7,264 | 134 |
| abstract_inverted_index.Here, | 110 |
| abstract_inverted_index.ORFs; | 137 |
| abstract_inverted_index.about | 52 |
| abstract_inverted_index.bring | 141 |
| abstract_inverted_index.clear | 62 |
| abstract_inverted_index.human | 13, 135 |
| abstract_inverted_index.their | 44, 53, 108 |
| abstract_inverted_index.these | 47 |
| abstract_inverted_index.while | 91 |
| abstract_inverted_index.(ORFs) | 21 |
| abstract_inverted_index.(UTRs) | 31 |
| abstract_inverted_index.effort | 115 |
| abstract_inverted_index.frames | 20 |
| abstract_inverted_index.genes. | 34 |
| abstract_inverted_index.global | 159 |
| abstract_inverted_index.others | 70 |
| abstract_inverted_index.remain | 94 |
| abstract_inverted_index.roles. | 58, 109 |
| abstract_inverted_index.stable | 68 |
| abstract_inverted_index.thwart | 105 |
| abstract_inverted_index.within | 22 |
| abstract_inverted_index.(HGNC), | 123 |
| abstract_inverted_index.ORFs’ | 66 |
| abstract_inverted_index.absence | 81 |
| abstract_inverted_index.because | 49 |
| abstract_inverted_index.catalog | 132 |
| abstract_inverted_index.certain | 64 |
| abstract_inverted_index.created | 87 |
| abstract_inverted_index.genome, | 14 |
| abstract_inverted_index.mediate | 71 |
| abstract_inverted_index.medical | 77 |
| abstract_inverted_index.outline | 112 |
| abstract_inverted_index.produce | 129 |
| abstract_inverted_index.reading | 19 |
| abstract_inverted_index.regions | 30 |
| abstract_inverted_index.roadmap | 153 |
| abstract_inverted_index.studies | 106 |
| abstract_inverted_index.HUPO/HPP | 125 |
| abstract_inverted_index.However, | 35 |
| abstract_inverted_index.Ribo-seq | 92, 136, 145 |
| abstract_inverted_index.Ribosome | 0 |
| abstract_inverted_index.circular | 89 |
| abstract_inverted_index.evidence | 143 |
| abstract_inverted_index.extended | 4 |
| abstract_inverted_index.presumed | 28 |
| abstract_inverted_index.problem: | 90 |
| abstract_inverted_index.projects | 39 |
| abstract_inverted_index.research | 156 |
| abstract_inverted_index.(lncRNAs) | 26 |
| abstract_inverted_index.Committee | 122 |
| abstract_inverted_index.examining | 107 |
| abstract_inverted_index.involving | 116 |
| abstract_inverted_index.noncoding | 24 |
| abstract_inverted_index.profiling | 1 |
| abstract_inverted_index.proteins, | 69 |
| abstract_inverted_index.reference | 36, 97, 148 |
| abstract_inverted_index.thousands | 16 |
| abstract_inverted_index.(Ribo-seq) | 2 |
| abstract_inverted_index.UniProtKB, | 124 |
| abstract_inverted_index.annotation | 38, 85, 98, 149 |
| abstract_inverted_index.community. | 160 |
| abstract_inverted_index.databases, | 99 |
| abstract_inverted_index.databases; | 150 |
| abstract_inverted_index.facilitate | 155 |
| abstract_inverted_index.uncovering | 15 |
| abstract_inverted_index.Ultimately, | 79 |
| abstract_inverted_index.circumspect | 42 |
| abstract_inverted_index.recognition | 103 |
| abstract_inverted_index.regulation, | 73 |
| abstract_inverted_index.‘Ribo-seq | 65 |
| abstract_inverted_index.Nomenclature | 121 |
| abstract_inverted_index.PeptideAtlas | 127 |
| abstract_inverted_index.experimental | 54 |
| abstract_inverted_index.standardized | 83, 131 |
| abstract_inverted_index.unrecognized | 95 |
| abstract_inverted_index.untranslated | 29 |
| abstract_inverted_index.community-led | 114 |
| abstract_inverted_index.implications. | 78 |
| abstract_inverted_index.incorporation | 45 |
| abstract_inverted_index.physiological | 57 |
| abstract_inverted_index.protein-level | 142 |
| abstract_inverted_index.translational | 9 |
| abstract_inverted_index.uncertainties | 51 |
| abstract_inverted_index.understanding | 6 |
| abstract_inverted_index.protein-coding | 33 |
| abstract_inverted_index.reproducibility | 55 |
| abstract_inverted_index.Ensembl/GENCODE, | 117 |
| abstract_inverted_index.‘vocabulary’ | 10 |
| cited_by_percentile_year.max | 100 |
| cited_by_percentile_year.min | 89 |
| corresponding_author_ids | https://openalex.org/A5040905591, https://openalex.org/A5088885084, https://openalex.org/A5038283509, https://openalex.org/A5090136020 |
| countries_distinct_count | 9 |
| institutions_distinct_count | 35 |
| corresponding_institution_ids | https://openalex.org/I107606265, https://openalex.org/I1303153112, https://openalex.org/I205582932, https://openalex.org/I4210127118 |
| sustainable_development_goals[0].id | https://metadata.un.org/sdg/4 |
| sustainable_development_goals[0].score | 0.8600000143051147 |
| sustainable_development_goals[0].display_name | Quality Education |
| citation_normalized_percentile.value | 0.99773841 |
| citation_normalized_percentile.is_in_top_1_percent | True |
| citation_normalized_percentile.is_in_top_10_percent | True |